BAC Information

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BAC

Clone NameB6Ng01-150A04
Chromosome6 (Build37)
Map Location 129,656,938 - 129,784,079
singlet/doubletdoublet
Overlap geneKlri1, Klri2, Gm156, Klra17
Upstream geneLOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755
Downstream geneKlra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150A04.bB6Ng01-150A04.g
ACCDH946198DH946199
length1,144964
definitionDH946198|Mus musculus domesticus DNA, BAC clone: B6Ng01-150A04, 5' end.DH946199|Mus musculus domesticus DNA, BAC clone: B6Ng01-150A04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,782,926 - 129,784,079)(129,656,938 - 129,657,801)
sequence
gaattcctctctgtttcccatatgacagagatgcaaatgcataatcccaa
taaacagaataccctccatcatcactagtatcaaccatttcaatatccta
tgtctctgatagcacgattaagaactaggatgtcactgtgggtttctatt
ggttggttggttggttagttagtgtttgttgctttttttgtacataggat
aaattatacttttagagtgaatttattagcagtaaatgtttagagttgat
taatagttgcctgagtcgttcaagaaactcattaaacttcagtaatctat
acatgtcctcgttcaatctctgtatctcttggatccatctgatgaaaagg
aaatcacacagatatagtaatactcacttcagcctgctgcttaaaatagc
tcaagacttacaatcttataggtacatgggtttggtgggagcctaggatt
cagagtatgtttgaagtcgctgtgtgctacagaatgagacaatgtgtcta
atgaatctaataataataataagctgctcagaaatacttcctagggtgaa
gcaatttcttttatagcattatacttaccttttaaaaattcagtatagat
ctagtaatatttttaatacataatctatattcataattatcagtttcttg
gatcatgcctctgttgatatttcttcatatttaagatcatgcagtatatt
cattcacaatgtccttaagttctgaaacagtttgactcactgtttgagaa
ttagatttaataatttaagtcttgatgttggagtctgcatataataaaat
gagtgtggcctagagaagagcatcatatactatgcacagatctttgatta
gctccgtatttttctgcatctttccatattattgttcttactatgatgtt
ctagctaactcaagctgtttttttttttttggattggtgttcattctttt
agttataaaccacttttgtacagcacaaaatatcccacatatttctccaa
tcagatgtgaacttatgtgttttctaaactttgacattatgaatttttga
caattgcacagctgtcatgtcatttatggtgcagtcaaggtgtgactact
ttttctttattaattattctttgtaagatctgggtatgctgtgt
gaattccagggccaagaagtgggagtgagtgggtaagggagcagggtgag
gggagggtataggggacttttgggataacatttgaaatgtaaatgaagaa
aatatctaataaaaaaaagaaatgtaagatagtaaaaaaaaaaaaaagaa
tgtatatctaaggctagagagatggcgcagtggttaagctcactgactgc
tcttccaaaggttttgatttcaattccagccaaccacatggtggctcaca
actgtctacaatggtatctgatgctctcttcttgtatgtctgaagacagc
aacaatgtactcacatacataaaataagtaaataaatcttaaaaaataat
aatgtctagcctctttgctagagacagacaagtagaacaatggaatagaa
ttgaagatccagaaatgaacccacacacctatggtcacttgatctttgac
aagggagataaaaccatccagtggaaaaaaacagcattttcaacaaatgg
tgctggcacaactggcggttatcatgtagaataatgtgaattgatccatt
cttatctccttgtactaaggtcaaatctaagtggatcaaggaactccaca
taaaaccagaggcactgaaacttatagaggagaaagtggggaaaagcctc
gaagatatggacacaggggaaaaattcctgaatagaacattaatggcttg
tgctgttaagatcgaggattgacaaatgggacctcataaaattgaaaagc
ttctgtaaggcaaaagacaccgtcaataagacagaaaggccaccaacaga
ttgggaaaggatctttacctgttctaaatcagatagggtactatattcca
tattttataaagaacttaagaatgtggacttcagaaatatcaaataaccc
cgttaaaatatgggacttcagagctaaacaaagaattctcacctgaggaa
taccaaatggctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129782926_129784079
seq2: B6Ng01-150A04.b_43_1186 (reverse)

seq1  ACACAGCATACACCAGATCTTAACAAAAGATAATTAATAAAAGAAAAAGT  50
      ||||||||||| ||||||||| |||||  ||||||||| |||||||||||
seq2  ACACAGCATAC-CCAGATCTT-ACAAAGAATAATTAAT-AAAGAAAAAGT  47

seq1  ATGTTCACACACTGACTTGCA-CATAAATTGACATGACAGCTGTTGCAAT  99
      |   ||||||  |||| |||| |||||| |||||||||||||| ||||||
seq2  A--GTCACACCTTGAC-TGCACCATAAA-TGACATGACAGCTG-TGCAAT  92

seq1  TGTCAAAAATTCATAATTGTCAAAGTTTAG-AAACACATAAGTTCACATC  148
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  TGTCAAAAATTCATAA-TGTCAAAGTTTAGAAAACACATAAGTTCACATC  141

seq1  TGATTGGAGAAATATTGTGGGATATTTTTGTGCTGTACAAAAGTGGTTTA  198
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  TGATTGGAGAAATA-TGTGGGATA-TTTTGTGCTGTACAAAAGTGGTTTA  189

seq1  TAACTAAAAGAATGAAACACCAATCCAAAAAAAAAAAAACAGCTTGAGTT  248
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAACTAAAAGAATG-AACACCAATCCAAAAAAAAAAAAACAGCTTGAGTT  238

seq1  AGCTAGAACATCATAGTAAGAACAATAATATGGAAAGATGCAGAAAAATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAACATCATAGTAAGAACAATAATATGGAAAGATGCAGAAAAATA  288

seq1  CGGAGCTAATCAAAGATCTGTGCATAGTATATGATGCTCTTCTCTAGGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCTAATCAAAGATCTGTGCATAGTATATGATGCTCTTCTCTAGGCC  338

seq1  ACACTCATTTTATTATATGCAGACTCCAACATCAAGACTTAAATTATTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCATTTTATTATATGCAGACTCCAACATCAAGACTTAAATTATTAA  388

seq1  ATCTAATTCTCAAACAGTGAGTCAAACTGTTTCAGAACTTAAGGACATTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTCTCAAACAGTGAGTCAAACTGTTTCAGAACTTAAGGACATTG  438

seq1  TGAATGAATATACTGCATGATCTTAAATATGAAGAAATATCAACAGAGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATATACTGCATGATCTTAAATATGAAGAAATATCAACAGAGGC  488

seq1  ATGATCCAAGAAACTGATAATTATGAATATAGATTATGTATTAAAAATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCAAGAAACTGATAATTATGAATATAGATTATGTATTAAAAATAT  538

seq1  TACTAGATCTATACTGAATTTTTAAAAGGTAAGTATAATGCTATAAAAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGATCTATACTGAATTTTTAAAAGGTAAGTATAATGCTATAAAAGA  588

seq1  AATTGCTTCACCCTAGGAAGTATTTCTGAGCAGCTTATTATTATTATTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTCACCCTAGGAAGTATTTCTGAGCAGCTTATTATTATTATTAG  638

seq1  ATTCATTAGACACATTGTCTCATTCTGTAGCACACAGCGACTTCAAACAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAGACACATTGTCTCATTCTGTAGCACACAGCGACTTCAAACAT  688

seq1  ACTCTGAATCCTAGGCTCCCACCAAACCCATGTACCTATAAGATTGTAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAATCCTAGGCTCCCACCAAACCCATGTACCTATAAGATTGTAAG  738

seq1  TCTTGAGCTATTTTAAGCAGCAGGCTGAAGTGAGTATTACTATATCTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGCTATTTTAAGCAGCAGGCTGAAGTGAGTATTACTATATCTGTG  788

seq1  TGATTTCCTTTTCATCAGATGGATCCAAGAGATACAGAGATTGAACGAGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTTTTCATCAGATGGATCCAAGAGATACAGAGATTGAACGAGG  838

seq1  ACATGTATAGATTACTGAAGTTTAATGAGTTTCTTGAACGACTCAGGCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATAGATTACTGAAGTTTAATGAGTTTCTTGAACGACTCAGGCAA  888

seq1  CTATTAATCAACTCTAAACATTTACTGCTAATAAATTCACTCTAAAAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAATCAACTCTAAACATTTACTGCTAATAAATTCACTCTAAAAGTA  938

seq1  TAATTTATCCTATGTACAAAAAAAGCAACAAACACTAACTAACCAACCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATCCTATGTACAAAAAAAGCAACAAACACTAACTAACCAACCAA  988

seq1  CCAACCAATAGAAACCCACAGTGACATCCTAGTTCTTAATCGTGCTATCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAATAGAAACCCACAGTGACATCCTAGTTCTTAATCGTGCTATCA  1038

seq1  GAGACATAGGATATTGAAATGGTTGATACTAGTGATGATGGAGGGTATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATAGGATATTGAAATGGTTGATACTAGTGATGATGGAGGGTATTC  1088

seq1  TGTTTATTGGGATTATGCATTTGCATCTCTGTCATATGGGAAACAGAGAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTGGGATTATGCATTTGCATCTCTGTCATATGGGAAACAGAGAG  1138

seq1  GAATTC  1154
      ||||||
seq2  GAATTC  1144

seq1: chr6_129656938_129657801
seq2: B6Ng01-150A04.g_70_933

seq1  GAATTCCAGGGCCAAGAAGTGGGAGTGAGTGGGTAAGGGAGCAGGGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCAAGAAGTGGGAGTGAGTGGGTAAGGGAGCAGGGTGAG  50

seq1  GGGAGGGTATAGGGGACTTTTGGGATAACATTTGAAATGTAAATGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTATAGGGGACTTTTGGGATAACATTTGAAATGTAAATGAAGAA  100

seq1  AATATCTAATAAAAAAAAGAAATGTAAGATAGTAAAAAAAAAAAAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATAAAAAAAAGAAATGTAAGATAGTAAAAAAAAAAAAAAGAA  150

seq1  TGTATATCTAAGGCTAGAGAGATGGCGCAGTGGTTAAGCTCACTGACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCTAAGGCTAGAGAGATGGCGCAGTGGTTAAGCTCACTGACTGC  200

seq1  TCTTCCAAAGGTTTTGATTTCAATTCCAGCCAACCACATGGTGGCTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAAAGGTTTTGATTTCAATTCCAGCCAACCACATGGTGGCTCACA  250

seq1  ACTGTCTACAATGGTATCTGATGCTCTCTTCTTGTATGTCTGAAGACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTACAATGGTATCTGATGCTCTCTTCTTGTATGTCTGAAGACAGC  300

seq1  AACAATGTACTCACATACATAAAATAAGTAAATAAATCTTAAAAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTACTCACATACATAAAATAAGTAAATAAATCTTAAAAAATAAT  350

seq1  AATGTCTAGCCTCTTTGCTAGAGACAGACAAGTAGAACAATGGAATAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTAGCCTCTTTGCTAGAGACAGACAAGTAGAACAATGGAATAGAA  400

seq1  TTGAAGATCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGAC  450

seq1  AAGGGAGATAAAACCATCCAGTGGAAAAAAACAGCATTTTCAACAAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGATAAAACCATCCAGTGGAAAAAAACAGCATTTTCAACAAATGG  500

seq1  TGCTGGCACAACTGGCGGTTATCATGTAGAATAATGTGAATTGATCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCACAACTGGCGGTTATCATGTAGAATAATGTGAATTGATCCATT  550

seq1  CTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTCCACA  600

seq1  TAAAACCAGAGGCACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAGAGGCACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTC  650

seq1  GAAGATATGGACACAGGGGAAAAATTCCTGAATAGAACATTAATGGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATGGACACAGGGGAAAAATTCCTGAATAGAACATTAATGGCTTG  700

seq1  TGCTGTTAAGATCGAGGATTGACAAATGGGACCTCATAAAATTGAAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTAAGATCGAGGATTGACAAATGGGACCTCATAAAATTGAAAAGC  750

seq1  TTCTGTAAGGCAAAAGACACCGTCAATAAGACAGAAAGGCCACCAACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGGCAAAAGACACCGTCAATAAGACAGAAAGGCCACCAACAGA  800

seq1  TTGGGAAAGGATCTTTACCTGTCCTAAATCAGATAGGGTACTAATATCCA  850
      |||||||||||||||||||||| ||||||||||||||||||| |||| | 
seq2  TTGGGAAAGGATCTTTACCTGTTCTAAATCAGATAGGGTACT-ATATTCC  849

seq1  ATA-TATATAAAGAA  864
      ||| | |||||||||
seq2  ATATTTTATAAAGAA  864