BAC Information

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BAC

Clone NameB6Ng01-150F17
Chromosome6 (Build37)
Map Location 18,775,818 - 18,777,049
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829
Downstream geneLsm8, Ankrd7, LOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150F17.bB6Ng01-150F17.g
ACCDH946457DH946458
length1,2091,156
definitionDH946457|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F17, 5' end.DH946458|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaaaattattattaggaattatgaaattatcaatttgtctac
ccagcattgctacattagcgtacattctcactgagctgcagagaatctgc
ccaatagggccaactaatacccaggaatcgttagcttatggaatagtaac
tggaagggcaaatgagtagcaagacccatcctgggatgaaacctctgaag
gccctacagttcagagtttacccttcacagccatgcaagccagtggacaa
tctcctgaaaacttccttgcatgcttttagcttttcctagatggctcctg
acatttgatcataccctttccactccaacaactcctcccagatattccct
acctccctaaccacacattcttctgttttctctgtttactctcttcaacc
ccattaaacaaaacaaccaaaactcaaccaaactaataagactaaaatac
caaaacaaacaaacaaacaaacaaacaaacaaacccatgaattcagtttt
gtgttgttcagctactcctggtcatagagcctgcactcgagtatggttta
tatacccagtgacactctcttggagaaacctgattttccctttcccagca
gatgtcaagtgcaaatagattcttgattaggaatgtaactttgtgttaac
actcaccttcacaatgctgggactttgtctggtctgaacatgtataagtc
ttgtacatgtttctgtgggttcacatgtgagttagtcctggtgtgtcttg
attagatacttccttgaagtcatctactagttaccttttttatacagcag
acacctgattaaagatggtactgatacaagagactgggtcctcaatatca
attagcaataaggaaaatgtcccctcattcatgcctacaagccaatctta
tggagtcaactcattaattgagattcactctttcctggcatgttaggcca
tcagtataaagtatgaaaagcagaaactcacagaacagatatacagaagt
aaaaaagatagtattattgtggactattatagattatattatcaaaagtg
agaacctagaaaaaagatatttctaaactatcttccttactattgaacag
aaggaacagaaattcttataaggcatagaggaaattgagtcaataattta
atgccatggcctagagaattgtcagtaatactgtcagcatatcaggatat
tttaaaatg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctctattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccaa
taaatgagctagagaaagtaccaaggagctaaagggatctgcaccctata
ggtggaacaacattatgactacagtacccgagctctgacttctagctgca
tatgcatcaaagatgctagtcgcaatcactggaaaagagcccattggaac
gcaaacttaattgcccagtacaggacgccaggccataaaagggaaatggg
tgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18775818_18777049
seq2: B6Ng01-150F17.b_44_1252

seq1  GAATTCTGTAAAATTATTATTAGGAATTATGAAATTATCAATTTGTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAAATTATTATTAGGAATTATGAAATTATCAATTTGTCTAC  50

seq1  CCAGCATTGCTACATTAGCGTACATTCTCACTGAGCTGCAGAGAATCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATTGCTACATTAGCGTACATTCTCACTGAGCTGCAGAGAATCTGC  100

seq1  CCAATAGGGCCAACTAATACCCAGGAATCGTTAGCTTATGGAATAGTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGGGCCAACTAATACCCAGGAATCGTTAGCTTATGGAATAGTAAC  150

seq1  TGGAAGGGCAAATGAGTAGCAAGACCCATCCTGGGATGAAACCTCTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGGCAAATGAGTAGCAAGACCCATCCTGGGATGAAACCTCTGAAG  200

seq1  GCCCTACAGTTCAGAGTTTACCCTTCACAGCCATGCAAGCCAGTGGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACAGTTCAGAGTTTACCCTTCACAGCCATGCAAGCCAGTGGACAA  250

seq1  TCTCCTGAAAACTTCCTTGCATGCTTTTAGCTTTTCCTAGATGGCTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGAAAACTTCCTTGCATGCTTTTAGCTTTTCCTAGATGGCTCCTG  300

seq1  ACATTTGATCATACCCTTTCCACTCCAACAACTCCTCCCAGATATTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGATCATACCCTTTCCACTCCAACAACTCCTCCCAGATATTCCCT  350

seq1  ACCTCCCTAACCACACATTCTTCTGTTTTCTCTGTTTACTCTCTTCAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCTAACCACACATTCTTCTGTTTTCTCTGTTTACTCTCTTCAACC  400

seq1  CCATTAAACAAAACAACCAAAACTCAACCAAACTAATAAGACTAAAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAACAAAACAACCAAAACTCAACCAAACTAATAAGACTAAAATAC  450

seq1  CAAAACAAACAAACAAACAAACAAACAAACAAACCCATGAATTCAGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAACAAACAAACAAACAAACAAACAAACCCATGAATTCAGTTTT  500

seq1  GTGTTGTTCAGCTACTCCTGGTCATAGAGCCTGCACTCGAGTATGGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTCAGCTACTCCTGGTCATAGAGCCTGCACTCGAGTATGGTTTA  550

seq1  TATACCCAGTGACACTCTCTTGGAGAAACCTGATTTTCCCTTTCCCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCAGTGACACTCTCTTGGAGAAACCTGATTTTCCCTTTCCCAGCA  600

seq1  GATGTCAAGTGCAAATAGATTCTTGATTAGGAATGTAACTTTGTGTTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAAGTGCAAATAGATTCTTGATTAGGAATGTAACTTTGTGTTAAC  650

seq1  ACTCACCTTCACAATGCTGGGACTTTGTCTGGTCTGAACATGTATAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCTTCACAATGCTGGGACTTTGTCTGGTCTGAACATGTATAAGTC  700

seq1  TTGTACATGTTTCTGTGGGTTCACATGTGAGTTAGTCCTGGTGTGTCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACATGTTTCTGTGGGTTCACATGTGAGTTAGTCCTGGTGTGTCTTG  750

seq1  ATTAGATACTTCCTTGAAGTCATCTACTAGTTACCTTTTTTATACAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATACTTCCTTGAAGTCATCTACTAGTTACCTTTTTTATACAGCAG  800

seq1  ACACCTGATTAAAGATGGTACTGATACAAGAGACTGGGTCCTCAATATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGATTAAAGATGGTACTGATACAAGAGACTGGGTCCTCAATATCA  850

seq1  ATTAGCAATAAGGAAAATGTCCCCTCATTCATGCCTACAAGCCAATCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAATAAGGAAAATGTCCCCTCATTCATGCCTACAAGCCAATCTTA  900

seq1  TGGAGTCAACTCATTAATTGAGATTCACTCTTTCCTGGCATGTTAGGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCAACTCATTAATTGAGATTCACTCTTTCCTGGCATGTTAGGCCA  950

seq1  TCAGTATAAAGTATGAAAAGCAGGAAAACTCACAGAACAAGATAATACAG  1000
      |||||||||||||||||||||||  ||||||||||||| |||| ||||||
seq2  TCAGTATAAAGTATGAAAAGCAG--AAACTCACAGAAC-AGAT-ATACAG  996

seq1  AAGTAAAAAAGATAAGTAATTATTGTGGACTATTATAGATTATA-TATCA  1049
      ||||||||||||| ||| |||||||||||||||||||||||||| |||| 
seq2  AAGTAAAAAAGAT-AGT-ATTATTGTGGACTATTATAGATTATATTATC-  1043

seq1  AAAAGTTGAAGAACCTAAGAAAAAAGATATTCTAAAACTAATCTTCC-TA  1098
      ||||||   ||||||| ||||||||||||||   ||||| ||||||| ||
seq2  AAAAGT--GAGAACCT-AGAAAAAAGATATTTCTAAACT-ATCTTCCTTA  1089

seq1  CTA-TGAACAAGAAGGAACAGAAAATCTTATTAGAGCAATAAGAAGGAAA  1147
      ||| ||||| |||||||||||||| |||||| || || |||   ||||||
seq2  CTATTGAAC-AGAAGGAACAGAAATTCTTATAAG-GC-ATA--GAGGAAA  1134

seq1  TTGAGTCAATAATTTTAGATGGCATGGGCTAGGAGATTTGTCCAGAGTAA  1197
      |||||||||||||||   ||| ||||| ||| |||| |||||   ||| |
seq2  TTGAGTCAATAATTT--AATGCCATGGCCTA-GAGAATTGTC---AGT-A  1177

seq1  ATACTGTCAGTTATACAAGGATATATTTTAAAATG  1232
      ||||||||||  |||  |||  |||||||||||||
seq2  ATACTGTCAG-CATATCAGG--ATATTTTAAAATG  1209


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