BAC Information

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BAC

Clone NameB6Ng01-150H11
Chromosome6 (Build37)
Map Location 128,434,916 - 128,513,381
singlet/doubletdoublet
Overlap genePzp, LOC384494, EG667610, BC048546
Upstream geneParp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598
Downstream geneKlrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150H11.bB6Ng01-150H11.g
ACCDH946539DH946540
length1,0211,058
definitionDH946539|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H11, 5' end.DH946540|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,512,758 - 128,513,381)(128,434,916 - 128,435,980)
sequence
gaattccatcacatcttcatactcagaatcgtttttctaaagtctccaca
aagaagctgggtgaacacctgtgacatcagcacttgagaggcacaggcag
gaggatcaggggttgaggaccaacctcagctgcatgagacatgtttttta
aaaaaaacaaaacaaaacaaacaaacaaaaaacagggctggagagatggc
tcagtgattaagagcactgactgctcttccaaaggtcctgagttcgattc
tcagcaatcacatggtggctcacaaccatctgtaatgagatccgatgact
tctggtgtgtctaaagacagctacagtgtactcatgtacattaaataaat
aaatattttaaaaaacaaacaaagctaacaacaaacaaaaccttttaaaa
ataaagaacattgccttgatatgtgggagatggggtatatgactattaaa
tttggggcctgtatttttctttaggtttcttgaaaaccttgctctcttgt
acctcactgtgctgtcagactaacttattctctctggtaggttatttggc
ctccttgtctggaggcctagagggtttggtttttatttcctcgaatatat
ttaaactaaaattttagtaagatatctcttaggatttattgggggaaggg
gtggaatccgaagcttagtctgcattgttacttaaaaattaagtttgttg
atttcttccctttcttgaaaattttcacacatgtgttagctcacttcaca
ggtgctcaaactctccagtttgcctgtggcctacttccattctttcttac
tttctcttttgttttctatttctctttctagaagctgggtgtgctgggtg
tggtgatgcacatctgtaatctttttgatttgggagggaaatcagaatgt
tcaagccacgatgagccttgtctcaacaaacaaaacaatggctgatttct
gtctgtcatttttctctagttttagcctttagattcgttctgatgtgttc
atcttctgagttcatctcaat
gaattcatctagaacacagaaatgattgagcagaaagtggttaattgtgg
gaaaacccctgaaaatacaggctagacttaagttattttgattgggggtg
gggcctaagagacccagggctgaggcacagaagcgaggagtagactccag
acttgctctgactgtgtgctcattgtatgtgctcagataaggaggagaca
tcgttaacactgttagcatagcgtaatcaagttcagagttggggctaaag
ggaagaatttcctactatgtactgtcccccaaccccattggggagattat
ctacagcacataaaaaaaaaatagatcaaatggtaggttttatgtcacat
atccgtagcaagatgtgatcttaaaaaaatattgctattctacctttcta
gaataatccagctctgagcaagccactttaaaggaaaattttagaactca
tgaccaattttcccatgatgtcttcatcagaatggccctaaggcttgttt
aaggtgctcccaagagatcaatatacaaaaacataattataagtgaccat
agactcacttttttcctggtgaaaagttgtggtgttttgtttaaggtaac
tttttcattaaactaggcagtgtctcctatcaaaactcagcgtgcctgga
ttccactcacctgtctcataataatcatagacttttatgggggctggttt
taagttctttactgggatgtcttgttccaccgcgaaggagaaaccgaggg
tttgattggttagctgcagagaggagaggagagaaatggactcaatggta
aacatagctaacaaaagacgatgtgcaaaaattctgtgagtggtctagtg
ccagaaatttagctttgcagatcagtcctggtcccatttccctttgtagc
tattttgtccttgcctgtgtgtgtgtgtgtgtgtacgcatgtgataaagg
agtggcagtagactggttctgaactcttgatggtctttattgtattgttg
tttcgggacagttttcaagggtttccttgtgtaatcctggctgccctgag
ctcgctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128512758_128513381
seq2: B6Ng01-150H11.b_449_1066 (reverse)

seq1  ATTGAGAATGAACTCAGAAGATGAACACATCAGAAACGAATTCTAAAGGC  50
      |||||| |||||||||||||||||||||||||| |||||| |||||||||
seq2  ATTGAG-ATGAACTCAGAAGATGAACACATCAG-AACGAA-TCTAAAGGC  47

seq1  TAAAAAGCCTAAGAGAAAAATGACAGACAGAAATCAGCCATTG-TTTGTT  99
      |||||   || |||||||||||||||||||||||||||||||| ||||||
seq2  TAAAA---CT-AGAGAAAAATGACAGACAGAAATCAGCCATTGTTTTGTT  93

seq1  TGTTGAGGCAAGGGCTCATCGTGGCTTTGAAC-TTCTGATTTCCCTCCCA  148
      ||||||| ||| ||||||||||||| |||||| |||||||||||||||||
seq2  TGTTGAGACAA-GGCTCATCGTGGC-TTGAACATTCTGATTTCCCTCCCA  141

seq1  AATCAAAAAGATTACAGATGTGCATCACCACACCCAGCACACCCAGCTTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAAAGATTACAGATGTGCATCACCACACCCAGCACACCCAGCTTC  191

seq1  TAG-AAGAGAAATAGAAAACAAAAGAGAAAGTAAGAAAGAATGGAAGTAG  247
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAGAAATAGAAAACAAAAGAGAAAGTAAGAAAGAATGGAAGTAG  241

seq1  GCCACAGGCAAACTGGAGAGTTTGAGCACCTGTGAAGTGAGCTAACACAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGGCAAACTGGAGAGTTTGAGCACCTGTGAAGTGAGCTAACACAT  291

seq1  GTGTGAAAATTTTCAAGAAAGGGAAGAAATCAACAAACTTAATTTTTAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAATTTTCAAGAAAGGGAAGAAATCAACAAACTTAATTTTTAAG  341

seq1  TAACAATGCAGACTAAGCTTCGGATTCCACCCCTTCCCCCAATAAATCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATGCAGACTAAGCTTCGGATTCCACCCCTTCCCCCAATAAATCCT  391

seq1  AAGAGATATCTTACTAAAATTTTAGTTTAAATATATTCGAGGAAATAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATATCTTACTAAAATTTTAGTTTAAATATATTCGAGGAAATAAAA  441

seq1  ACCAAACCCTCTAGGCCTCCAGACAAGGAGGCCAAATAACCTACCAGAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACCCTCTAGGCCTCCAGACAAGGAGGCCAAATAACCTACCAGAGA  491

seq1  GAATAAGTTAGTCTGACAGCACAGTGAGGTACAAGAGAGCAAGGTTTTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAGTTAGTCTGACAGCACAGTGAGGTACAAGAGAGCAAGGTTTTCA  541

seq1  AGAAACCTAAAGAAAAATACAGGCCCCAAATTTAATAGTCATATACCCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTAAAGAAAAATACAGGCCCCAAATTTAATAGTCATATACCCCA  591

seq1  TCTCCCACATATCAAGGCAATGTTCTT  624
      |||||||||||||||||||||||||||
seq2  TCTCCCACATATCAAGGCAATGTTCTT  618

seq1: chr6_128434916_128435980
seq2: B6Ng01-150H11.g_67_1124

seq1  GAATTCATCTAGAACACAGAAATGATTGAGCAGAAAGTGGTTAATTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAGAACACAGAAATGATTGAGCAGAAAGTGGTTAATTGTGG  50

seq1  GAAAACCCCTGAAAATACAGGCTAGACTTAAGTTATTTTGATTGGGGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCCTGAAAATACAGGCTAGACTTAAGTTATTTTGATTGGGGGTG  100

seq1  GGGCCTAAGAGACCCAGGGCTGAGGCACAGAAGCGAGGAGTAGACTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTAAGAGACCCAGGGCTGAGGCACAGAAGCGAGGAGTAGACTCCAG  150

seq1  ACTTGCTCTGACTGTGTGCTCATTGTATGTGCTCAGATAAGGAGGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCTGACTGTGTGCTCATTGTATGTGCTCAGATAAGGAGGAGACA  200

seq1  TCGTTAACACTGTTAGCATAGCGTAATCAAGTTCAGAGTTGGGGCTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAACACTGTTAGCATAGCGTAATCAAGTTCAGAGTTGGGGCTAAAG  250

seq1  GGAAGAATTTCCTACTATGTACTGTCCCCCAACCCCATTGGGGAGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAATTTCCTACTATGTACTGTCCCCCAACCCCATTGGGGAGATTAT  300

seq1  CTACAGCACATAAAAAAAAAATAGATCAAATGGTAGGTTTTATGTCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCACATAAAAAAAAAATAGATCAAATGGTAGGTTTTATGTCACAT  350

seq1  ATCCGTAGCAAGATGTGATCTTAAAAAAATATTGCTATTCTACCTTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTAGCAAGATGTGATCTTAAAAAAATATTGCTATTCTACCTTTCTA  400

seq1  GAATAATCCAGCTCTGAGCAAGCCACTTTAAAGGAAAATTTTAGAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATCCAGCTCTGAGCAAGCCACTTTAAAGGAAAATTTTAGAACTCA  450

seq1  TGACCAATTTTCCCATGATGTCTTCATCAGAATGGCCCTAAGGCTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAATTTTCCCATGATGTCTTCATCAGAATGGCCCTAAGGCTTGTTT  500

seq1  AAGGTGCTCCCAAGAGATCAATATACAAAAACATAATTATAAGTGACCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCTCCCAAGAGATCAATATACAAAAACATAATTATAAGTGACCAT  550

seq1  AGACTCACTTTTTTCCTGGTGAAAAGTTGTGGTGTTTTGTTTAAGGTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACTTTTTTCCTGGTGAAAAGTTGTGGTGTTTTGTTTAAGGTAAC  600

seq1  TTTTTCATTAAACTAGGCAGTGTCTCCTATCAAAACTCAGCGTGCCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTAAACTAGGCAGTGTCTCCTATCAAAACTCAGCGTGCCTGGA  650

seq1  TTCCACTCACCTGTCTCATAATAATCATAGACTTTTATGGGGGCTGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTCACCTGTCTCATAATAATCATAGACTTTTATGGGGGCTGGTTT  700

seq1  TAAGTTCTTTACTGGGATGTCTTGTTCCACCGCGAAGGAGAAACCGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTTTACTGGGATGTCTTGTTCCACCGCGAAGGAGAAACCGAGGG  750

seq1  TTTGATTGGTTAGCTGCAGAGAGGAGAGGAGAGAAATGGACTCAATGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTGGTTAGCTGCAGAGAGGAGAGGAGAGAAATGGACTCAATGGTA  800

seq1  AACATAGCTAACAAAAGACGATGTGCAAAAATTCTGTGAGTGGTCTAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCTAACAAAAGACGATGTGCAAAAATTCTGTGAGTGGTCTAGTG  850

seq1  CCAGAAATTTAGCTTTGCAGATCAGTCCTGGTCCCATTTCCCTTTGTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATTTAGCTTTGCAGATCAGTCCTGGTCCCATTTCCCTTTGTAGC  900

seq1  TATTTTGTCCTTGCCTGTGTGTGTGTGTGTGTGTACGCATGTGATAAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTCCTTGCCTGTGTGTGTGTGTGTGTGTACGCATGTGATAAAGG  950

seq1  AGTGGCAGTAAGACTGGTTCTGAACTCTTGATGGTCTTTTATTGTTATTG  1000
      ||||||||| |||||||||||||||||||||||||| ||||||| |||||
seq2  AGTGGCAGT-AGACTGGTTCTGAACTCTTGATGGTC-TTTATTG-TATTG  997

seq1  TTGTTTTTCGGGGACAGTTTTCCAGGGTTTCCCTGTGTATCCCTGGCTGC  1050
      ||||||    |||||||||||| ||||||||| ||||||  |||||||||
seq2  TTGTTT---CGGGACAGTTTTCAAGGGTTTCCTTGTGTAATCCTGGCTGC  1044

seq1  CCTGGAGCTCGCTCT  1065
      ||| |||||||||||
seq2  CCT-GAGCTCGCTCT  1058