BAC Information

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BAC

Clone NameB6Ng01-150K23
Chromosome6 (Build37)
Map Location 11,939,241 - 11,940,376
singlet/doubletsinglet
Overlap genePhf14
Upstream geneNdufa4, LOC100040844
Downstream geneEG625347, LOC435879, Thsd7a, LOC667735
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150K23.bB6Ng01-150K23.g
ACCDH946703DH946704
length1,1761,136
definitionDH946703|Mus musculus domesticus DNA, BAC clone: B6Ng01-150K23, 5' end.DH946704|Mus musculus domesticus DNA, BAC clone: B6Ng01-150K23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacactaaaactaaagtccctgggctttattttattggaagact
gctgatgactgcttctatttctttaggggttatagagctgtttgaatagt
ttacctggtattgatttcactttggtaagtggtatctatctagaatatca
tccatttcattaagattttccaattttgtggaatacaggcttttgatgta
agacctaatgattctttgaacttcctcagtatcttttattatgtctccct
tttcatttttgattttgtttatttagatattgtctctctgtcttttggat
agattctgtaagggtttgtttatcttcttgacttcctcaaagatccagta
cttggtttcattaattctttgtagtgtttactctgtttttaattgatatc
agccctgatttttaaaatttcctgccttctactcttttgtgtgctttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcctcttcctcctcctcctccacctcctcctc
ttcctctttctcctcttcttcctctttcttctcttttttgcctagagctt
tcaggtatacttttaaattgctgatatgagaactgtctaatttctttatg
gaagcagtgctatgaactttcctcttagcactgctttcattgtatcccag
aaatttgggtgccttcattttcactgggttgtagaaagtcattaatttct
ttatttctttacagatccagagattattgagtagagagttgttcagtttc
caggagtgtgtaggtttttcagtgtttctgttgttcttgaagtccagctt
tagtctcagatggtctgattagatagaaggcattatttcaattttcttgt
atatgctgagccttacattatggactaaactatatggtcaatttttggat
aatgatcatataggtactggaggaagaaggtatatttttcctggtggttg
ggtggaaattgtcctataagaggtctcgtatgtgcccttttgactcataa
aagctcttacttttattatttctctggataagctctttgctcgatagaac
ctggtcactaggtaaaaaaagaagttgaagactcaccactataatggtgg
gaggtcacggtgcccaattatgatat
gaattctttgttcgttggagcttatgaaaattcattctcagttctttaca
agatatatgatttatcttcctgaagaacaagtatctcttcattcaatcta
cagagcctcaaatgaacctgaaacattcttaactaaaattctgaaacgta
caaagttcactttcgtgcatgtaaaataacttctaactagtacatactag
ttgaaaagtagatactattattccgttataatttcattacttgcctataa
agcactgtaggaagagcagatgtcttttgtgtgcctccttcttttttact
tggtttcctttccttaggtgctcgtaagattgctggtacattcaacttct
attgatggaataaaagtagtacatgctgttttaaagatggaagtacaaag
cagtatttcccccacttgccactaaatctaaggaagccagcacttagaga
ggtaagtctgctttatattagcaaagggaaagaaaacagagtgataatct
taactacttctattataaagctacaactgcatagtctcgttagttctcag
aaatacattaaacttcatgaaaattacactacttccacttgaaaacctta
gaacaatgaggaaagtagaggaggcttaaaaatctaacacagtatagtta
aaaacaacaaaaaaataccagtgtgcttctttgcaatattccagctatat
tggtgttccataggttaattagagaaattatcgtattggactaaactccg
taaaaaagcagatgaaattctcttttgtactctactaatctgtagtacga
tggcttctgagacagtgaacatctatcaacgtcactgcttagtaccctgg
tgagctcacatctgttcagtcaactggaacagtatcatgtatgatacatg
tgtctgtgcagattgccttcacacaagcaattttcaatcctctgtgaagt
tacttaataaatgaaaatgtcttttatcacagatattttaaactatagag
tacaattttgtgataaaaatataaacccagacaaaacaaatgctagaatc
tgcaagtaactccaaatttccttttctgaatcttactagtacttattatt
aggaaaagttaaatatggtccaaagcaccctcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11939241_11940376
seq2: B6Ng01-150K23.g_67_1202 (reverse)

seq1  AGATGA-GTTGCTTTTGGACATATTAACTTTTTCCTATTAATAAGTACTT  49
      |||||| | |||||| |  |||||| |  |||||||| |||||||||| |
seq2  AGATGAGGGTGCTTTGGACCATATTTAACTTTTCCTAATAATAAGTAC-T  49

seq1  AGT-AGATTCAGAAAAGGAAATTTGGAGTTACTTGCAGA-TCTAGCATTT  97
      ||| ||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTAAGATTCAGAAAAGGAAATTTGGAGTTACTTGCAGATTCTAGCATTT  99

seq1  GTTTTGTCTGGGTTTATATTTTTATCACAAAATTGTACTCTATAGTTTAA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTCTGGGTTTATATTTTTATCACAAAATTGTACTCTATAGTTTAA  149

seq1  AATATTCTGTGATAAAAGACATTTTCATTTATTAAGTAACTTCACAGAGG  197
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATA-TCTGTGATAAAAGACATTTTCATTTATTAAGTAACTTCACAGAGG  198

seq1  ATTGAAAATTGCCTTGTGTGAAGGCAATCTGCACAGACACATGTATCATA  247
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATTG-CTTGTGTGAAGGCAATCTGCACAGACACATGTATCATA  247

seq1  CATGATACTGTTCCAGTTGACTGAACAGATGTGAGCTCACCAGGGTACTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATACTGTTCCAGTTGACTGAACAGATGTGAGCTCACCAGGGTACTA  297

seq1  AGCAGTGACGTTGATAGATGTTCACTGTCTCAGAAGCCATCGTACTACAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGACGTTGATAGATGTTCACTGTCTCAGAAGCCATCGTACTACAG  347

seq1  ATTAGTAGAGTACAAAAGAGAATTTCATCTGCTTTTTTACGGAGTTTAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAGAGTACAAAAGAGAATTTCATCTGCTTTTTTACGGAGTTTAGT  397

seq1  CCAATACGATAATTTCTCTAATTAACCTATGGAACACCAATATAGCTGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACGATAATTTCTCTAATTAACCTATGGAACACCAATATAGCTGGA  447

seq1  ATATTGCAAAGAAGCACACTGGTATTTTTTTGTTGTTTTTAACTATACTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCAAAGAAGCACACTGGTATTTTTTTGTTGTTTTTAACTATACTG  497

seq1  TGTTAGATTTTTAAGCCTCCTCTACTTTCCTCATTGTTCTAAGGTTTTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGATTTTTAAGCCTCCTCTACTTTCCTCATTGTTCTAAGGTTTTCA  547

seq1  AGTGGAAGTAGTGTAATTTTCATGAAGTTTAATGTATTTCTGAGAACTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGTAGTGTAATTTTCATGAAGTTTAATGTATTTCTGAGAACTAA  597

seq1  CGAGACTATGCAGTTGTAGCTTTATAATAGAAGTAGTTAAGATTATCACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACTATGCAGTTGTAGCTTTATAATAGAAGTAGTTAAGATTATCACT  647

seq1  CTGTTTTCTTTCCCTTTGCTAATATAAAGCAGACTTACCTCTCTAAGTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTTTCCCTTTGCTAATATAAAGCAGACTTACCTCTCTAAGTGC  697

seq1  TGGCTTCCTTAGATTTAGTGGCAAGTGGGGGAAATACTGCTTTGTACTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCTTAGATTTAGTGGCAAGTGGGGGAAATACTGCTTTGTACTTC  747

seq1  CATCTTTAAAACAGCATGTACTACTTTTATTCCATCAATAGAAGTTGAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAAAACAGCATGTACTACTTTTATTCCATCAATAGAAGTTGAAT  797

seq1  GTACCAGCAATCTTACGAGCACCTAAGGAAAGGAAACCAAGTAAAAAAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGCAATCTTACGAGCACCTAAGGAAAGGAAACCAAGTAAAAAAGA  847

seq1  AGGAGGCACACAAAAGACATCTGCTCTTCCTACAGTGCTTTATAGGCAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCACACAAAAGACATCTGCTCTTCCTACAGTGCTTTATAGGCAAG  897

seq1  TAATGAAATTATAACGGAATAATAGTATCTACTTTTCAACTAGTATGTAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAATTATAACGGAATAATAGTATCTACTTTTCAACTAGTATGTAC  947

seq1  TAGTTAGAAGTTATTTTACATGCACGAAAGTGAACTTTGTACGTTTCAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGAAGTTATTTTACATGCACGAAAGTGAACTTTGTACGTTTCAGA  997

seq1  ATTTTAGTTAAGAATGTTTCAGGTTCATTTGAGGCTCTGTAGATTGAATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTTAAGAATGTTTCAGGTTCATTTGAGGCTCTGTAGATTGAATG  1047

seq1  AAGAGATACTTGTTCTTCAGGAAGATAAATCATATATCTTGTAAAGAACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATACTTGTTCTTCAGGAAGATAAATCATATATCTTGTAAAGAACT  1097

seq1  GAGAATGAATTTTCATAAGCTCCAACGAACAAAGAATTC  1136
      |||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGAATTTTCATAAGCTCCAACGAACAAAGAATTC  1136