BAC Information

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BAC

Clone NameB6Ng01-151C10
Chromosome6 (Build37)
Map Location 124,377,635 - 124,514,662
singlet/doubletdoublet
Overlap geneClstn3, C1rl, C1r, C1s
Upstream geneLOC626436, EG546912, LOC100043511, Vmn2r-ps32, EG546913, LOC100043516, EG435916, EG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5
Downstream geneLOC667277, EG317677, Mboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23, Spsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151C10.bB6Ng01-151C10.g
ACCDH947048DH947049
length302903
definitionDH947048|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C10, 5' end.DH947049|Mus musculus domesticus DNA, BAC clone: B6Ng01-151C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,514,361 - 124,514,662)(124,377,635 - 124,378,541)
sequence
atgagaaagatcctacattcaatctccatgactacagtaagcagatcaac
caactcacagatgagtttgagaatcattaagtaaacctgaatgcaaaaga
tcacagcgtggcagcctgagaatgggagtgtagagggggaatgtcaccct
acatgtggtggtggtgatggtggtgccgggttcttagtgatggtagaatg
gatggtaacgtttttattggtctcgcaaatgattgagtatggcggggaca
gagttgatgtggtgatgataacagggatggtggtaatgtggtggtgatgg
tg
gaattcaggaaattggtagcctcgttgggcgctagtccatcctcacacag
tatacgttcagacacccccaggaaacccccaagggtttgaaggatctcag
gaattctcacacagtctagaagaaccccacaatgtgactggtcttgggag
ttttagtgaatccacttaagagagttcttgaaaagctgaaatctgaaaag
agcctgacatcttccacagctcctcaaagaatggaagcagacatgttctt
gacccttcccaaaaaagcccccgaaaggggagggatgatgggtggataat
tccaagagagcccaaaagctgcaccctccactgaacttgcagccaacctc
cctggcaacactgaggcagggttccagggttctggtttggtaacatgaag
aaagacacagtgacacttgagccggcagttgacacgcttgcctctacagt
gtggcttcccagtagctcagcacttgcttcatcatggataaagctaatta
attttcctggccaagagtggacttaagagggacagagcctcccactgcag
gaggggaaaatgagtgaggccgagggaaatctgtttgctacgtctaatta
aattgagactagttgagcttgaaatccagccaatcctgaagtcctagggc
ttacccatcagtcaaatgcctacctcctttcccatgccttcttccctctc
aggaagcagctggagagagccaggttctgtaagagaggttaaagaatgtt
ctaggagatcttgagcaagaaaagaaagactcatttggagtcttgcctgc
tgccctttccctagatcattgaggtggcaccttgccctaattctattctc
tctctctctctctctctctctctcgtgtgtgtgtgtgtgtgtgagtgtgt
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_124514361_124514662
seq2: B6Ng01-151C10.b_54_355 (reverse)

seq1  CACCATCACCACCACATTACCACCATCCCTGTTATCATCACCACATCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCACCACCACATTACCACCATCCCTGTTATCATCACCACATCAAC  50

seq1  TCTGTCCCCGCCATACTCAATCATTTGCGAGACCAATAAAAACGTTACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCCGCCATACTCAATCATTTGCGAGACCAATAAAAACGTTACCA  100

seq1  TCCATTCTACCATCACTAAGAACCCGGCACCACCATCACCACCACCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTACCATCACTAAGAACCCGGCACCACCATCACCACCACCACAT  150

seq1  GTAGGGTGACATTCCCCCTCTACACTCCCATTCTCAGGCTGCCACGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTGACATTCCCCCTCTACACTCCCATTCTCAGGCTGCCACGCTGT  200

seq1  GATCTTTTGCATTCAGGTTTACTTAATGATTCTCAAACTCATCTGTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTGCATTCAGGTTTACTTAATGATTCTCAAACTCATCTGTGAGT  250

seq1  TGGTTGATCTGCTTACTGTAGTCATGGAGATTGAATGTAGGATCTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGATCTGCTTACTGTAGTCATGGAGATTGAATGTAGGATCTTTCTC  300

seq1  AT  302
      ||
seq2  AT  302

seq1: chr6_124377635_124378541
seq2: B6Ng01-151C10.g_70_972

seq1  GAATTCAGGAAATTGGTAGCCTCGTTGGGCGCTAGTCCATCCTCACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAATTGGTAGCCTCGTTGGGCGCTAGTCCATCCTCACACAG  50

seq1  TATACGTTCAGACACCCCCAGGAAACCCCCAAGGGTTTGAAGGATCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGTTCAGACACCCCCAGGAAACCCCCAAGGGTTTGAAGGATCTCAG  100

seq1  GAATTCTCACACAGTCTAGAAGAACCCCACAATGTGACTGGTCTTGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACACAGTCTAGAAGAACCCCACAATGTGACTGGTCTTGGGAG  150

seq1  TTTTAGTGAATCCACTTAAGAGAGTTCTTGAAAAGCTGAAATCTGAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTGAATCCACTTAAGAGAGTTCTTGAAAAGCTGAAATCTGAAAAG  200

seq1  AGCCTGACATCTTCCACAGCTCCTCAAAGAATGGAAGCAGACATGTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGACATCTTCCACAGCTCCTCAAAGAATGGAAGCAGACATGTTCTT  250

seq1  GACCCTTCCCAAAAAAGCCCCCGAAAGGGGAGGGATGATGGGTGGATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTCCCAAAAAAGCCCCCGAAAGGGGAGGGATGATGGGTGGATAAT  300

seq1  TCCAAGAGAGCCCAAAAGCTGCACCCTCCACTGAACTTGCAGCCAACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAGAGCCCAAAAGCTGCACCCTCCACTGAACTTGCAGCCAACCTC  350

seq1  CCTGGCAACACTGAGGCAGGGTTCCAGGGTTCTGGTTTGGTAACATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAACACTGAGGCAGGGTTCCAGGGTTCTGGTTTGGTAACATGAAG  400

seq1  AAAGACACAGTGACACTTGAGCCGGCAGTTGACACGCTTGCCTCTACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACACAGTGACACTTGAGCCGGCAGTTGACACGCTTGCCTCTACAGT  450

seq1  GTGGCTTCCCAGTAGCTCAGCACTTGCTTCATCATGGATAAAGCTAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTCCCAGTAGCTCAGCACTTGCTTCATCATGGATAAAGCTAATTA  500

seq1  ATTTTCCTGGCCAAGAGTGGACTTAAGAGGGACAGAGCCTCCCACTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGGCCAAGAGTGGACTTAAGAGGGACAGAGCCTCCCACTGCAG  550

seq1  GAGGGGAAAATGAGTGAGGCCGAGGGAAATCTGTTTGCTACGTCTAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAAAATGAGTGAGGCCGAGGGAAATCTGTTTGCTACGTCTAATTA  600

seq1  AATTGAGACTAGTTGAGCTTGAAATCCAGCCAATCCTGAAGTCCTAGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGACTAGTTGAGCTTGAAATCCAGCCAATCCTGAAGTCCTAGGGC  650

seq1  TTACCCATCAGTCAAATGCCTACCTCCTTTCCCATGCCTTCTTCCCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATCAGTCAAATGCCTACCTCCTTTCCCATGCCTTCTTCCCTCTC  700

seq1  AGGAAGCAGCTGGAGAGAGCCAGGTTCTGTAAGAGAGGTTAAAGAATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGCTGGAGAGAGCCAGGTTCTGTAAGAGAGGTTAAAGAATGTT  750

seq1  CTAGGAGATCTTGAGCAAGAAAAGAAAGACTCATTTGGAGTCTTGCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGATCTTGAGCAAGAAAAGAAAGACTCATTTGGAGTCTTGCCTGC  800

seq1  TGCCCTTTCCCTAGATCATTGAAGTTGGCACCTTG-CCTAATTCTATTCT  849
      ||||||||||||||||||||| || |||||||||| |||||||||||   
seq2  TGCCCTTTCCCTAGATCATTG-AGGTGGCACCTTGCCCTAATTCTAT---  846

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTGTGTGTGTGTGTGTGTG  899
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -TCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTGTGTGTGTGTGTGTGAG  895

seq1  TGTGTGTG  907
      ||||||||
seq2  TGTGTGTG  903