BAC Information

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BAC

Clone NameB6Ng01-151N09
Chromosome6 (Build37)15 (Build37)
Map Location 18,835,443 - 18,835,96841,437,298 - 41,438,472
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151N09.bB6Ng01-151N09.g
ACCDH947557DH947558
length1,0001,141
definitionDH947557|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N09, 5' end.DH947558|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,443 - 18,835,968)(41,437,298 - 41,438,472)
sequence
gaattctttgttcagctctgagccccatcttttaagggggttatttgatt
ttctggagtccaccctcttgagttctttatatatatattggatattagtc
ccctatctgatttaagataggtaaagatcctttcccaatctgttggtggt
cttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttc
atgaggtcccatttgtcaattcttgatcttacagcacaagccattgctgt
tctattcaggaattttttccctgtgcccatatcttggaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatatgaagttccttg
atccacttagatttgaccttagtacaaggaaagaggaatgggtcgattcg
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctgtctttcttccactggatggttttagctccattgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtcactataccagtaccatgcagtttttataacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccacaaaagagcaat
ctgcaaattcatctggaataacaaaaaacctgggatagcaaaagcttgct
gtcatttttgttgtttgaggtggaactgtgtttgaggtggttctcgtctt
ttgggtttgttgggagaagattgatttcttgctttcttttgggtgtattt
tcattccttgtgttggaattttccttctgtttccccctataggtctggat
tggtggaaagatattgtttaaattttgtttgtcatggaatgtcttggctt
ctccatctacagtaattgagtgttttgctcaatataatagccagagctag
catttttggtctctaggtctgtatgatattgcccatgatctctggctttt

gaattcaacacttctgaccttcatgaacacatcacacaaatatgtacata
cacatacaaacacacaattaaagacaataaatcttagacatataatgaag
gaattgcttttcacaaacactggggctagaactaatcataactaatcagt
tgaaggtttgctttactttgaagcagagaaaacctctttctatgagcagt
gaatggaactccaggcaatgtaggatttgctgtttgttctgtacagtgag
ctcctgctgtgtcgtggccggcttactctcagggaggatagcgtttggga
tgtgttcatggccctgccacgtatctctttttgttttgattgcctgtggg
tttccattctagtccgaattctgaacatcaatgattcagtcaccttcccc
ttccatcagcaaaaaagtcacattgtgtgcggacttccaagcttccattt
cctgagtatcttttgtgtgcctcaaacagaagaaaatgcggagagacaga
catgaagctgcattctttgaggtggtagggaatggtttaagaaatagaca
cttgggaggatgtgcccaggcatgattttgatcaaaagaccacagagcca
ttgcactgtgacaagatgtgccttcataatctgcctctagcacggcgttg
gtaaaatgcctggctcgtttaactgtttcagtcgggtatctatttcaaac
acccaggcaattgatcgtccacatatctgagcactcaccacactatgaat
aaattatggcccattcatcatgtgaaatacacaccaagacaaaactgagc
tgaagtcccacacaccactcccctcaaagcggtgctacattacagtcttg
caagtaatgtttgtactattttcattttgtttaaaaatatgaaccaaccc
acatgattgtagttaggacaaagaaagttgggcaaggacactctacctgc
caagagaagaagcagatgtgtaggagtggtggcatgcagatcatacacag
cacaggcacactgaatagtatgtagctgtataaacagtgcattctccaca
gtcagtgacttcgatctgagtcattttaagaaacaattgaaagttctagt
agtgacacaacttttaagttgatgaatctatacaacacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835443_18835968
seq2: B6Ng01-151N09.b_48_575 (reverse)

seq1  CAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCT  50
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAATGGAGCT  50

seq1  AAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCA  100
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCA  100

seq1  CAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTC  150
      ||||||||||||||| |||||||||||| ||||||| |||| | | | ||
seq2  CAACTGGTTGTTATCATGTAGAAGAATGCGAATCGACCCATTCCTCTTTC  150

seq1  CATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCA  200
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCATATAAAACCA  200

seq1  GAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATAT  250
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  GAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCCAAGATAT  250

seq1  GGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGA  299
      ||||| |||| |||| |||||||| |||||||||||||| |||||||| |
seq2  GGGCACAGGGAAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAA  300

seq1  GGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAG  349
      | |  ||||| |||||||||||||| |||||||| ||||| |||||||||
seq2  GATCAAGAATTGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAG  350

seq1  GCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAG  399
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCAAAAGACACCGTCAATAAGAC-AAAAGACCACCAACAGATTGGGAAAG  399

seq1  GATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCA--ACATATA  447
      |||||||||||||| ||||||||||||||||||||||||||  | |||||
seq2  GATCTTTACCTATCTTAAATCAGATAGGGGACTAATATCCAATATATATA  449

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  497
      |||||||||||||| |||||||| ||||||||||||||||||| |||| |
seq2  TAAAGAACTCAAGAGGGTGGACTCCAGAAAATCAAATAACCCCCTTAAAA  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  526
       |||||||||||| |||||||||||||||
seq2  GATGGGGCTCAGAGCTGAACAAAGAATTC  528

seq1: chr15_41437298_41438472
seq2: B6Ng01-151N09.g_67_1207 (reverse)

seq1  CAGGTGGTTGTATAGACTACAATTCAACTTTTAAAAGTTGTGTCACTTAC  50
      ||||| |||||||||| | ||  |||||  |||||||||||||||| |||
seq2  CAGGT-GTTGTATAGA-TTCA--TCAAC--TTAAAAGTTGTGTCAC-TAC  43

seq1  TGAGAAAACTTATCAATTGTTTCTTTAGAAATGACTTCAGATCGGAGTCC  100
      |   | ||||| |||||||||||||   ||||||| |||||||| ||| |
seq2  T---AGAACTT-TCAATTGTTTCTT--AAAATGAC-TCAGATCGAAGT-C  85

seq1  ACTGACTGTGGAGAAATGCCACTGTTTAATACAGGCTACATACTATTCAG  150
      ||||||||||||| |||| |||||||| ||||| ||||||||||||||||
seq2  ACTGACTGTGGAG-AATG-CACTGTTT-ATACA-GCTACATACTATTCAG  131

seq1  TGTGCCCTGTGCCTTGTGTATTGGTCTGCAATTGCCACCACTCCTACAAC  200
      |||| |||||||  |||||| || ||||||  ||||||||||||||| ||
seq2  TGTG-CCTGTGC--TGTGTA-TGATCTGCA--TGCCACCACTCCTAC-AC  174

seq1  ATCTGCTTCTTTCTCTTTGGCAGGGTAGAGTGTCCTTGCCCAACTTTCTT  250
      ||||||||| ||||| |||||| |||||||||||||||||||||||||||
seq2  ATCTGCTTC-TTCTC-TTGGCA-GGTAGAGTGTCCTTGCCCAACTTTCTT  221

seq1  TGTCCTTAACCTACAATCATGTGGGTTGGTTCATATTTTTAAACAAAAAT  300
      ||||||  | |||||||||||||||||||||||||||||||||| |||||
seq2  TGTCCT--AACTACAATCATGTGGGTTGGTTCATATTTTTAAAC-AAAAT  268

seq1  GAAAATAGTACAAACATTACTTTGCAAGACTGTAATGTAGCACCTGCTTT  350
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  GAAAATAGTACAAACATTAC-TTGCAAGACTGTAATGTAGCACC-GCTTT  316

seq1  GAGGGGAGTGGTGTGTGGGACTTCAGCTCAGTTTTGTCTTGGTGTGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGTGGTGTGTGGGACTTCAGCTCAGTTTTGTCTTGGTGTGTATT  366

seq1  TCACATGATGAATGGGCCATAATTTATTCATAGTGTGGTGAGTGCTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGATGAATGGGCCATAATTTATTCATAGTGTGGTGAGTGCTCAGA  416

seq1  TATGTGGACGATCAATTGCCTGGGTGTTTGAAATAGATACCCGACTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGACGATCAATTGCCTGGGTGTTTGAAATAGATACCCGACTGAAA  466

seq1  CAGTTAAACGAGCCAGGCATTTTACCAACGCCGTGCTAGAGGCAGATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAACGAGCCAGGCATTTTACCAACGCCGTGCTAGAGGCAGATTAT  516

seq1  GAAGGCACATCTTGTCACAGTGCAATGGCTCTGTGGTCTTTTGATCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCACATCTTGTCACAGTGCAATGGCTCTGTGGTCTTTTGATCAAAA  566

seq1  TCATGCCTGGGCACATCCTCCCAAGTGTCTATTTCTTAAACCATTCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTGGGCACATCCTCCCAAGTGTCTATTTCTTAAACCATTCCCTA  616

seq1  CCACCTCAAAGAATGCAGCTTCATGTCTGTCTCTCCGCATTTTCTTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCAAAGAATGCAGCTTCATGTCTGTCTCTCCGCATTTTCTTCTGT  666

seq1  TTGAGGCACACAAAAGATACTCAGGAAATGGAAGCTTGGAAGTCCGCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCACACAAAAGATACTCAGGAAATGGAAGCTTGGAAGTCCGCACA  716

seq1  CAATGTGACTTTTTTGCTGATGGAAGGGGAAGGTGACTGAATCATTGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGACTTTTTTGCTGATGGAAGGGGAAGGTGACTGAATCATTGATG  766

seq1  TTCAGAATTCGGACTAGAATGGAAACCCACAGGCAATCAAAACAAAAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATTCGGACTAGAATGGAAACCCACAGGCAATCAAAACAAAAAGA  816

seq1  GATACGTGGCAGGGCCATGAACACATCCCAAACGCTATCCTCCCTGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACGTGGCAGGGCCATGAACACATCCCAAACGCTATCCTCCCTGAGAG  866

seq1  TAAGCCGGCCACGACACAGCAGGAGCTCACTGTACAGAACAAACAGCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCGGCCACGACACAGCAGGAGCTCACTGTACAGAACAAACAGCAAA  916

seq1  TCCTACATTGCCTGGAGTTCCATTCACTGCTCATAGAAAGAGGTTTTCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACATTGCCTGGAGTTCCATTCACTGCTCATAGAAAGAGGTTTTCTC  966

seq1  TGCTTCAAAGTAAAGCAAACCTTCAACTGATTAGTTATGATTAGTTCTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAAAGTAAAGCAAACCTTCAACTGATTAGTTATGATTAGTTCTAG  1016

seq1  CCCCAGTGTTTGTGAAAAGCAATTCCTTCATTATATGTCTAAGATTTATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTGTTTGTGAAAAGCAATTCCTTCATTATATGTCTAAGATTTATT  1066

seq1  GTCTTTAATTGTGTGTTTGTATGTGTATGTACATATTTGTGTGATGTGTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAATTGTGTGTTTGTATGTGTATGTACATATTTGTGTGATGTGTT  1116

seq1  CATGAAGGTCAGAAGTGTTGAATTC  1175
      |||||||||||||||||||||||||
seq2  CATGAAGGTCAGAAGTGTTGAATTC  1141