BAC Information

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BAC

Clone NameB6Ng01-152A15
Chromosome6 (Build37)6 (Build37)
Map Location 18,834,821 - 18,835,43541,491,707 - 41,492,730
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152A15.bB6Ng01-152A15.g
ACCDH947712DH947713
length8821,021
definitionDH947712|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A15, 5' end.DH947713|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,834,821 - 18,835,435)(41,491,707 - 41,492,730)
sequence
gaattctattccattgttctacttttctgtcgctataccagtaccatgca
gtttttatcacaattgctctgtagtacagctttaggtcaggcatagtgat
tctaccagaggttcttttctcaatgagaagagtttttgctattctaggtt
tattgttattccagatgaacctgcaaattgccctttctaacttcatgaag
aattgaattggaatcttgatggggattgcattgaatctgtagattgcttt
cagcaagatagacatttttactatattgatcctgccaatccatgagcatg
ggagatctttccatcttctgagatcttctttaattttttcttcagagatt
tgaagttcttatcatacagatctttcaatccttagttagagacaccacaa
ggtattttgtattatttgtgactattgtgaagggtgttgtttccctaatt
tctttctcagcctgtttatcctttgtgtagagaaaggccattgacttgtt
tgtgttaattttatatccagctacttcactgaagctgtttatcaggttta
ggagttctctggtagaatttttagggtcacttatatatactatcatatca
tctgcaaaaagtgatattttgatttcttcctttccaaattgtatcccctt
gatctccttttgttgtagaattgttctggctaggacttcaagtactatgc
tgagtaggtcgggagaaagtaggcagcctagtttagtccctgattttagg
gggattgcttccagcttctcaccatttactttgatgttggctactggttt
gctgtagattgcttttatcatgtttaggtataggcctcaaattcctgatc
tttccaagacttttatcatgatgggtgttgga
gaattcttcctctttcctcaccttcctcaatacagacccggggttactca
cattctccatctacctccagaactggtaaggcaatcttgaccttgcatga
ggccgatctcaaattgaggaggagataccacttttggcttgggaacggat
atccatctattcactcagggtttgacaaagtgaatttgaaatctgaaggc
ttcctgttggtgtccaggtagcctccaatgagaaaggacttgtaacttct
ttcccacaaagggtttatttttctacttaatgctttttaataagttcata
atttcccatgcatgtacggatactttgctgatggttaacatgataagggc
tgaatggtggtcccacttccctggatagcctttcacactcgtgggaaact
tgctagggcaagaagatgcatagatgttataagaccttgtgagtccactc
acatagactcctcctcacatgttaaatgcattttttgggctgagagttgg
tgtttttttgggtagagctttttgtaaaagcacctcttccagttgaatca
ttgtggcccccccagtccccacaatgttacatcgtgatacaaaaaagttt
cttccccacaggtgcctaccccagagcctgggcaggggcagggagaccag
gtggcagagaggtttgtctgactgagaggggctgggaaaagtctcaagct
gggtaaatctaaagaggggaggagcttggagatgtccttgggactggtat
tgttgatgggggcagggagccctgttctgaatgtggtctcactctgggag
aacatctatatcactgggtttcctcctctttgtcacagtgcccacctgct
tagactggcatttatagagaaatgggtgggaggagttaagtgataaggtc
cctaccagagactcacagaacagctgatgtaactaagaacgcagagaaac
attgcctcagaaactatcatcatcttgttgctaatgtgacaatgtccagc
tttctcatttacttatccgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18834821_18835435
seq2: B6Ng01-152A15.b_46_658 (reverse)

seq1  TCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTC  50

seq1  TACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGAT  100
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACCAGAGAACTCCTAAACCTGATAAACAGCTTCAGTGAAGTAGCTGGAT  100

seq1  ATAAAATAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAA  150
      ||||||| ||| ||||||||||||||||||||||||| |||||| |||||
seq2  ATAAAATTAACACAAACAAGTCAATGGCCTTTCTCTACACAAAGGATAAA  150

seq1  CAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGCCACAAA  200
      |||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  CAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCACAATAGTCACAAA  200

seq1  TAATATAAAATATCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGT  250
      ||||| |||||| ||||  ||| |||||||||||| | ||||||||||||
seq2  TAATACAAAATACCTTGTGGTGTCTCTAACTAAGG-ATTGAAAGATCTGT  249

seq1  ATGATAAAAACTTCAAATCTCTGAAGAAAGAAATTAAAGAAGATCTCAGA  300
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGATAAGAACTTCAAATCTCTGAAGAAA-AAATTAAAGAAGATCTCAGA  298

seq1  AGATGGAAAAATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAA  350
      ||||||||| ||||||||||||||||||||||||||||||| || |||||
seq2  AGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAA  348

seq1  AATGGCTCTCTTGCCAAAAGCAATCTGCAGATTCAATGCAATCCCCATCA  400
      |||| || ||||||  |||||||||| |||||||||||||||||||||||
seq2  AATGTCTATCTTGCTGAAAGCAATCTACAGATTCAATGCAATCCCCATCA  398

seq1  AAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTC  450
      | ||||||| |||||||||||   | |||||| | ||||||||||  |||
seq2  AGATTCCAATTCAATTCTTCATGAAGTTAGAAAGGGCAATTTGCAGGTTC  448

seq1  ATCTGGAATAACAAAAAACCTAGGATAGCAAAACCTCTTCTCAAGGATAA  500
      |||||||||||||| |||||||| ||||||||| |||||||||  || ||
seq2  ATCTGGAATAACAATAAACCTAGAATAGCAAAAACTCTTCTCATTGAGAA  498

seq1  AAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAG  550
      ||||||||||||| ||||||| ||||||||||||||||| ||||||||||
seq2  AAGAACCTCTGGTAGAATCACTATGCCTGACCTAAAGCTGTACTACAGAG  548

seq1  CAATTGTGGTAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGAC  600
      |||||||| ||||||||||||||||||||||||| |||||| ||||||| 
seq2  CAATTGTGATAAAAACTGCATGGTACTGGTATAGCGACAGAAAAGTAGAA  598

seq1  CAATGGAATAGAATT  615
      |||||||||||||||
seq2  CAATGGAATAGAATT  613

seq1: chr6_41491707_41492730
seq2: B6Ng01-152A15.g_68_1088 (reverse)

seq1  TACGGACTAAGTAAATGAGAAAGCTGAACATTGTCCAGTAAGCAACAGGA  50
      |||||| ||||||||||||||||||| ||||||||   | ||||||| | 
seq2  TACGGA-TAAGTAAATGAGAAAGCTGGACATTGTCACATTAGCAACAAG-  48

seq1  ATGATGATAGTTTCTGAGGC-ATGTGTCTCTGCGTTCTAAGTTACATCAG  99
      |||||||||||||||||||| |||| |||||||||||| |||||||||||
seq2  ATGATGATAGTTTCTGAGGCAATGTTTCTCTGCGTTCTTAGTTACATCAG  98

seq1  CTGTTCTGTGGAGTCTCCTGGTAGGGACCTTATCACTTCACTCCTCCCAC  149
      ||||||||| |||||| ||||||||||||||||||||| |||||||||||
seq2  CTGTTCTGT-GAGTCT-CTGGTAGGGACCTTATCACTTAACTCCTCCCAC  146

seq1  CCATTTCTCTATAAATGCCAGTCTAAGCAGGTGGGCACTGTGACAAAGAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTCTATAAATGCCAGTCTAAGCAGGTGGGCACTGTGACAAAGAG  196

seq1  GAGGAAACCCAGTGATATAGATGTTCTCCCAGAGTGAGACCACATTCAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACCCAGTGATATAGATGTTCTCCCAGAGTGAGACCACATTCAGA  246

seq1  ACAGGGCTCCCTGCCCCCATCAACAATACCAGTCCCAAGGACATCTCCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCTCCCTGCCCCCATCAACAATACCAGTCCCAAGGACATCTCCAA  296

seq1  GCTCCTCCCCTCTTTAGATTTACCCAGCTTGAGACTTTTCCCAGCCCCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCCCTCTTTAGATTTACCCAGCTTGAGACTTTTCCCAGCCCCTC  346

seq1  TCAGTCAGACAAACCTCTCTGCCACCTGGTCTCCCTGCCCCTGCCCAGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAGACAAACCTCTCTGCCACCTGGTCTCCCTGCCCCTGCCCAGGC  396

seq1  TCTGGGGTAGGCACCTGTGGGGAAGAAACTTTTTTGTATCACGATGTAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTAGGCACCTGTGGGGAAGAAACTTTTTTGTATCACGATGTAAC  446

seq1  ATTGTGGGGACTGGGGGGGCCACAATGATTCAACTGGAAGAGGTGCTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGGGACTGGGGGGGCCACAATGATTCAACTGGAAGAGGTGCTTTT  496

seq1  ACAAAAAGCTCTACCCAAAAAAACACCAACTCTCAGCCCAAAAAATGCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGCTCTACCCAAAAAAACACCAACTCTCAGCCCAAAAAATGCAT  546

seq1  TTAACATGTGAGGAGGAGTCTATGTGAGTGGACTCACAAGGTCTTATAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGTGAGGAGGAGTCTATGTGAGTGGACTCACAAGGTCTTATAAC  596

seq1  ATCTATGCATCTTCTTGCCCTAGCAAGTTTCCCACGAGTGTGAAAGGCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGCATCTTCTTGCCCTAGCAAGTTTCCCACGAGTGTGAAAGGCTA  646

seq1  TCCAGGGAAGTGGGACCACCATTCAGCCCTTATCATGTTAACCATCAGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGAAGTGGGACCACCATTCAGCCCTTATCATGTTAACCATCAGCA  696

seq1  AAGTATCCGTACATGCATGGGAAATTATGAACTTATTAAAAAGCATTAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCCGTACATGCATGGGAAATTATGAACTTATTAAAAAGCATTAAG  746

seq1  TAGAAAAATAAACCCTTTGTGGGAAAGAAGTTACAAGTCCTTTCTCATTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATAAACCCTTTGTGGGAAAGAAGTTACAAGTCCTTTCTCATTG  796

seq1  GAGGCTACCTGGACACCAACAGGAAGCCTTCAGATTTCAAATTCACTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTACCTGGACACCAACAGGAAGCCTTCAGATTTCAAATTCACTTTG  846

seq1  TCAAACCCTGAGTGAATAGATGGATATCCGTTCCCAAGCCAAAAGTGGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCCTGAGTGAATAGATGGATATCCGTTCCCAAGCCAAAAGTGGTA  896

seq1  TCTCCTCCTCAATTTGAGATCGGCCTCATGCAAGGTCAAGATTGCCTTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCTCAATTTGAGATCGGCCTCATGCAAGGTCAAGATTGCCTTAC  946

seq1  CAGTTCTGGAGGTAGATGGAGAATGTGAGTAACCCCGGGTCTGTATTGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGGAGGTAGATGGAGAATGTGAGTAACCCCGGGTCTGTATTGAG  996

seq1  GAAGGTGAGGAAAGAGGAAGAATTC  1024
      |||||||||||||||||||||||||
seq2  GAAGGTGAGGAAAGAGGAAGAATTC  1021