BAC Information

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BAC

Clone NameB6Ng01-152D11
Chromosome6 (Build37)
Map Location 75,504,532 - 75,505,732
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152D11.bB6Ng01-152D11.g
ACCDH947843DH947844
length9561,183
definitionDH947843|Mus musculus domesticus DNA, BAC clone: B6Ng01-152D11, 5' end.DH947844|Mus musculus domesticus DNA, BAC clone: B6Ng01-152D11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtagcttactgaacagtaaataatgatgaatttgtgaattct
gtgtttcagtgggagattctagctttaaaacaatataacatgtgaagaag
taaaggcagacatgcagaggtgagatcttgcatatacagtctcaggttcc
catcttcatattcatacatacacacaatacatatatatacacatagagga
ggattatccttttttaataaattgaacatttagttggaaatggtcatata
agtagcgggctaaaaagattagaggcaatttttcacaaggcagatagcag
gttcagatgttttgtttctttactgaagaaaaaaagagaaagataaatgt
ttgtcaacctttgctcatgtcttcagcaatagctgaattcctcatcttga
aaaaaatgagttttgctgatggagtaaagaagaggaagctgattggagag
tagaattttccattgatgagtacgacatattccttctattatttttatta
cttttggaagaaaatctattttattatattttagaatggctactacaact
tgtttcttggatctgcttgattacaaaaaaatttccagccctctactatg
agataatgttttctttgttgctgagatatttcttgtatatagcagaacta
tgtgtcccacttatgcaaccattctgataactcatgcctttaattagggg
atttagtcgattgatgttgagtgatattaataaccaatagctgtatttac
tgttatgttgatgttggtggtgatggtatgtgtgtgatctcacctggttt
taatggtgtgaaattatttatttcgtatgtattcttaattttccttaccc
tgcttgggttgcaggtttgtttctacgtttcggtcttcaattattatttc
ttttttgatggattatatccttaattgcattcaaatttctcctttcttgt
gattcc

gaattctcatttattagtgataatattctcagtgccatgagtaaaccaaa
aacagagctttaaaagacattaaagaaacttgtgtagattgggaagatcg
agctggtctttgtacagaacatttatactaaaaaaaaaaatgttatttct
tcaaagacatcttgtaggctttggaagaccaaagtagatactgaaatctg
tttcaagccctcatttttctgctgtatttattattgttttattgtttctt
aattgtttctattatcatgaaaattgatttcattatagcatgtttatata
aatatatgattgtacattgctcatacttatgctccaaatattctttcatc
tgtcaatttaggttcccttattaaccataagtagttcttttctgctctcc
cctctctgcctctatgtgtgtatatgtgtctgtctctctatttgtctgtc
tgtttctgtgtcttcgttgcttttcttctatctttctgtctctctgtcac
tctttctgtctctgtctgactctattactatcaaaaacatatatacaggt
aaactgcaattctaagtataataaaaaatgtaaaggttaggtgattaact
accctttcccttttcgttatatctctagacatacaaaaatatttaatatt
tcatttttatgttttttaaatgcatgtgtctgtgtgagcaagtgccatgc
atgtgaagtatctgaaaaaaacattacaggatactggctccataagaggt
gaatttacagtttctctacaacaagacatgagttcggagaagcaaattgt
ggacctctgtaaaagcagaagacacacttcaccatttagccatctctcca
tccctataaagagatttttgtaagaatggcaaacataaatattcacaaat
gtaaatttatacatcacgaactattaaatttaaactgcataatattaaaa
ttgtgattggtattgtcactatatttatatgtactgcaatagaaaatatt
ataaattgtaaggagatccttcagcatggaataaatgcatctactggttt
atattaggagaaaaagtgggattcggggaatagagttgtctaagcaaact
tgctatactaacagatgtttgaaataaattgagttaggcattcagaacca
tttgtctcctagatgtaaacttcacatgaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75504532_75505732
seq2: B6Ng01-152D11.g_68_1250

seq1  GAATTCTCATTTATTAGTGATAATATTCTCAGTGCCATGAGTAAACCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTATTAGTGATAATATTCTCAGTGCCATGAGTAAACCAAA  50

seq1  AACAGAGCTTTAAAAGACATTAAAGAAACTTGTGTAGATTGGGAAGATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCTTTAAAAGACATTAAAGAAACTTGTGTAGATTGGGAAGATCG  100

seq1  AGCTGGTCTTTGTACAGAACATTTATACTAAAAAAAAAAATGTTATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTCTTTGTACAGAACATTTATACTAAAAAAAAAAATGTTATTTCT  150

seq1  TCAAAGACATCTTGTAGGCTTTGGAAGACCAAAGTAGATACTGAAATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACATCTTGTAGGCTTTGGAAGACCAAAGTAGATACTGAAATCTG  200

seq1  TTTCAAGCCCTCATTTTTCTGCTGTATTTATTATTGTTTTATTGTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGCCCTCATTTTTCTGCTGTATTTATTATTGTTTTATTGTTTCTT  250

seq1  AATTGTTTCTATTATCATGAAAATTGATTTCATTATAGCATGTTTATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTCTATTATCATGAAAATTGATTTCATTATAGCATGTTTATATA  300

seq1  AATATATGATTGTACATTGCTCATACTTATGCTCCAAATATTCTTTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGATTGTACATTGCTCATACTTATGCTCCAAATATTCTTTCATC  350

seq1  TGTCAATTTAGGTTCCCTTATTAACCATAAGTAGTTCTTTTCTGCTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATTTAGGTTCCCTTATTAACCATAAGTAGTTCTTTTCTGCTCTCC  400

seq1  CCTCTCTGCCTCTATGTGTGTATATGTGTCTGTCTCTCTATTTGTCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGCCTCTATGTGTGTATATGTGTCTGTCTCTCTATTTGTCTGTC  450

seq1  TGTTTCTGTGTCTTCGTTGCTTTTCTTCTATCTTTCTGTCTCTCTGTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGTGTCTTCGTTGCTTTTCTTCTATCTTTCTGTCTCTCTGTCAC  500

seq1  TCTTTCTGTCTCTGTCTGACTCTATTACTATCAAAAACATATATACAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGTCTCTGTCTGACTCTATTACTATCAAAAACATATATACAGGT  550

seq1  AAACTGCAATTCTAAGTATAATAAAAAATGTAAAGGTTAGGTGATTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAATTCTAAGTATAATAAAAAATGTAAAGGTTAGGTGATTAACT  600

seq1  ACCCTTTCCCTTTTCGTTATATCTCTAGACATACAAAAATATTTAATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCCCTTTTCGTTATATCTCTAGACATACAAAAATATTTAATATT  650

seq1  TCATTTTTATGTTTTTTAAATGCATGTGTCTGTGTGAGCAAGTGCCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTATGTTTTTTAAATGCATGTGTCTGTGTGAGCAAGTGCCATGC  700

seq1  ATGTGAAGTATCTGAAAAAAACATTACAGGATACTGGCTCCATAAGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAGTATCTGAAAAAAACATTACAGGATACTGGCTCCATAAGAGGT  750

seq1  GAATTTACAGTTTCTCTACAACAAGACATGAGTTCGGAGAAGCAAATTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACAGTTTCTCTACAACAAGACATGAGTTCGGAGAAGCAAATTGT  800

seq1  GGACCTCTGTAAAAGCAGAAGACACACTTCACCATTTAGCCATCTCTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCTGTAAAAGCAGAAGACACACTTCACCATTTAGCCATCTCTCCA  850

seq1  TCCCTATAAAGAGATTTTTGTAAGAATGGCAAACATAAATATTCACAAAA  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCCCTATAAAGAGATTTTTGTAAGAATGGCAAACATAAATATTCAC-AAA  899

seq1  TGTAAATTTATACATCACGAACTAATTAAATTTAAACTGCATAATATTAA  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTAAATTTATACATCACGAACT-ATTAAATTTAAACTGCATAATATTAA  948

seq1  AATTGTGATTGGTATTGTCACTATATTTATATGTACTGCAATAGAAAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGATTGGTATTGTCACTATATTTATATGTACTGCAATAGAAAATA  998

seq1  ATTTATTAAATTGTAAAGAGATCCTTCAGCATTGAATAGATGCATCTTAC  1050
        ||| |||||||||| ||||||||||||||| ||||| ||||||| |||
seq2  --TTA-TAAATTGTAAGGAGATCCTTCAGCATGGAATAAATGCATC-TAC  1044

seq1  TGGTTTATACTAGGAGAAAAAAGTTGAATCCGTGAATAGAGTTGTCAAAA  1100
      ||||||||| |||||||||||    || || | |||||||||||||  ||
seq2  TGGTTTATATTAGGAGAAAAAGTGGGATTCGGGGAATAGAGTTGTC-TAA  1093

seq1  GCAAAACTTGCTATACATAACAGATGTTTTAGAAATAAATTGAGTTATAG  1150
      || ||||||||||||| ||||||||||||  ||||||||||||||  |||
seq2  GC-AAACTTGCTATAC-TAACAGATGTTT--GAAATAAATTGAGT--TAG  1137

seq1  CAATTCATGACACTATTGTCTCCTATGATGTAAAAACTTCCACATGAAAG  1200
        ||||| ||  |  |||||||||| |||||  |||||| ||||||||||
seq2  GCATTCA-GAACCATTTGTCTCCTA-GATGT--AAACTT-CACATGAAAG  1182

seq1  A  1201
      |
seq2  A  1183


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