BAC Information

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BAC

Clone NameB6Ng01-152F07
Chromosome6 (Build37)6 (Build37)
Map Location 18,835,579 - 18,835,968130,853,728 - 130,854,876
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152F07.bB6Ng01-152F07.g
ACCDH947931DH947932
length1,0141,137
definitionDH947931|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F07, 5' end.DH947932|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,579 - 18,835,968)(130,853,728 - 130,854,876)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttctatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaaactgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaaatttggagtttca
ttagttcccatttgtcaattctcgatcttacagcacaagccattgttgtt
ctgttcaggaattttttcccctgtggccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttctttg
atccatttagatttgaccttagtacaaggagataagtatggagtttttgc
tatcctaggttttttgttattccagatgaatttgcaaattgctccttcta
attccttgaagaattgagtcagaattttgatggggattgcattgaatctg
tagattgctattggcaagatagccatttttacaatgttgatcctgccaat
ccatgagcatgggagatctttccatcttctgagatcttctttaatttctt
tcttcagagacttgaagtttttatcatacagatctttcacttccttagtg
agagtcactccgagatattttatattatttgtgactattgagaagggtgt
tgtttccctaatttctttctcagcctgtttattctttgtgtagagaaagg
ccattgacttgtttgagttaattttatatccagctacttcaccgaagctg
tttatcaggtttaggagttctctggtggaatttttagggtcacttatata
tactatcatatcatctgcaaaaagtgataatttgacttcctcctttccaa
tttgtatcccttgatctcctttgtgtcgaattgctctggctaatacttca
agtactatgttgaaaacataggagaaagtgggcagccttgtctagtcctg
atttagtgggattg
gaattcttgcctcttcctcccaaattctgaagctacatttgtccatactt
gtatttatccacattaataatttaagatttgatcatttttcatagattca
ctattcatctttccctgcctattatgaaaaagactggctgacacattctg
ctaattatttcagagtcttacctctattgaaccctggtctataaaggaat
tgtcttcttttcccacatatattgaagaaacttttaattattagttatta
tttgatcagatacctgttcctaagccaagtcagaactggttttttatcct
gctaattcagactcccaaaatcttatcacccatgtttcctctcaaaggat
gagtttatagatatcacctttcctttgatttatattctattcaactttta
aaattattttcacagcaatgtagatttgggacacctaataaacaatacag
cagagactgcagtgtgttgattacagggaagtctttcaatcaccatgttt
caatgaataacttttagctttgacgttaagaagaaaaagacaaaaaacca
accaaacaaacaaacaaactgtgttcataaaccatcatttgtacctttat
tacacacctttttctctataaaaagcaggcatatgagaccttgtattgta
ttttacatacatttatttcttcctttaaatctattgtcattgctcaaagt
ataatatgagagcattttcagtataaaactattgcttattatttcagcaa
tgatggaaaaaaattctacttgctagataaagatactggtatgaaaagca
taatgtgttgagctgttatcagagacaatattttttgttactatgttaat
gtatttttgggtggattaatttgcatgcacatataaaggtcccacagcaa
cagagcaattagtggacatctgaaagaattaaatctctcctttaattatg
agcatctgagactaaactgagcttgtcagtttggtgtcaacagtcctcaa
cccattaagccactggcctaaaacaatactttagcagttagggaaaaaca
tatttttgtgtaccacatttatttatttcatattctatgcattttagtca
taaccttgcttccaatcatgcactctaaaataaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835579_18835968
seq2: B6Ng01-152F07.b_48_439 (reverse)

seq1  TCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAAC  50
      ||||||||||||||| |||||||||||||||||||| |||||||| ||||
seq2  TCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAAC  50

seq1  TTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAA  100

seq1  AGCCTTGAAGATATGGGCAGAGGGG-AAAAGTTCCTGAACAGAACAGCAA  149
      |||||||||||||||| || ||||| |||| ||||||||||||||| |||
seq2  AGCCTTGAAGATATGGCCACAGGGGAAAAAATTCCTGAACAGAACAACAA  150

seq1  TGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAACTC  198
      |||| |||||||| || | |||||| ||||||||||| ||||||||||||
seq2  TGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGAACTAATGAAACTC  200

seq1  CAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACC  248
      |||| |||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAATTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAGAGACCACC  250

seq1  AACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAA  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAA  300

seq1  TATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAAT  348
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATCCAACATATAGAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAAT  350

seq1  AACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  390
      ||||||||||| ||||||||||||||||||||||||||||||
seq2  AACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  392

seq1: chr6_130853728_130854876
seq2: B6Ng01-152F07.g_66_1202 (reverse)

seq1  AGCTTATATTTTAGATGGCCATGATTTTTGAAGCAAAGTTTATTGACTAA  50
      ||||| ||||||||| |  |||||  || ||||||| |||   |||||||
seq2  AGCTT-TATTTTAGA-GTGCATGA--TTGGAAGCAAGGTT--ATGACTAA  44

seq1  AATGCATAGAATATGGAATTAAATAAATGTGTATCACTAAAATATGTTTT  100
      |||||||||||||| ||| ||||||||||||   ||| ||||||||||||
seq2  AATGCATAGAATAT-GAAATAAATAAATGTGGTACACAAAAATATGTTTT  93

seq1  TCCCTAAACTGCTAAAGTATTGTCTTAGGCCAGTGGCTTAAATGGGTTGA  150
      ||||| ||||||||||||||||| ||||||||||||||| ||||||||||
seq2  TCCCT-AACTGCTAAAGTATTGTTTTAGGCCAGTGGCTT-AATGGGTTGA  141

seq1  -GACTGTTGACACCAAACCTGACAAGCTCAGTTTAGTCCTCAGATGCCTC  199
       |||||||||||||||| ||||||||||||||||||| |||||||| |||
seq2  GGACTGTTGACACCAAA-CTGACAAGCTCAGTTTAGT-CTCAGATG-CTC  188

seq1  ATAATTAAAGGAGAGATTTAATTCTTTTCAGATGTCCACTAATTGCTCTG  249
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAATTAAAGGAGAGATTTAATTC-TTTCAGATGTCCACTAATTGCTCTG  237

seq1  TTGCTGTGGGACCTTTATATGTGCATGCAAATTAATCCACCCAAAAATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGGGACCTTTATATGTGCATGCAAATTAATCCACCCAAAAATAC  287

seq1  ATTAACATAGTAACAAAAAATATTGTCTCTGATAACAGCTCAACACATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATAGTAACAAAAAATATTGTCTCTGATAACAGCTCAACACATTA  337

seq1  TGCTTTTCATACCAGTATCTTTATCTAGCAAGTAGAATTTTTTTCCATCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCATACCAGTATCTTTATCTAGCAAGTAGAATTTTTTTCCATCA  387

seq1  TTGCTGAAATAATAAGCAATAGTTTTATACTGAAAATGCTCTCATATTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAATAATAAGCAATAGTTTTATACTGAAAATGCTCTCATATTAT  437

seq1  ACTTTGAGCAATGACAATAGATTTAAAGGAAGAAATAAATGTATGTAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAGCAATGACAATAGATTTAAAGGAAGAAATAAATGTATGTAAAA  487

seq1  TACAATACAAGGTCTCATATGCCTGCTTTTTATAGAGAAAAAGGTGTGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATACAAGGTCTCATATGCCTGCTTTTTATAGAGAAAAAGGTGTGTA  537

seq1  ATAAAGGTACAAATGATGGTTTATGAACACAGTTTGTTTGTTTGTTTGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGTACAAATGATGGTTTATGAACACAGTTTGTTTGTTTGTTTGGT  587

seq1  TGGTTTTTTGTCTTTTTCTTCTTAACGTCAAAGCTAAAAGTTATTCATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTGTCTTTTTCTTCTTAACGTCAAAGCTAAAAGTTATTCATTG  637

seq1  AAACATGGTGATTGAAAGACTTCCCTGTAATCAACACACTGCAGTCTCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGTGATTGAAAGACTTCCCTGTAATCAACACACTGCAGTCTCTG  687

seq1  CTGTATTGTTTATTAGGTGTCCCAAATCTACATTGCTGTGAAAATAATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTGTTTATTAGGTGTCCCAAATCTACATTGCTGTGAAAATAATTT  737

seq1  TAAAAGTTGAATAGAATATAAATCAAAGGAAAGGTGATATCTATAAACTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTGAATAGAATATAAATCAAAGGAAAGGTGATATCTATAAACTC  787

seq1  ATCCTTTGAGAGGAAACATGGGTGATAAGATTTTGGGAGTCTGAATTAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGAGAGGAAACATGGGTGATAAGATTTTGGGAGTCTGAATTAGC  837

seq1  AGGATAAAAAACCAGTTCTGACTTGGCTTAGGAACAGGTATCTGATCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAAAAACCAGTTCTGACTTGGCTTAGGAACAGGTATCTGATCAAA  887

seq1  TAATAACTAATAATTAAAAGTTTCTTCAATATATGTGGGAAAAGAAGACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTAATAATTAAAAGTTTCTTCAATATATGTGGGAAAAGAAGACA  937

seq1  ATTCCTTTATAGACCAGGGTTCAATAGAGGTAAGACTCTGAAATAATTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTATAGACCAGGGTTCAATAGAGGTAAGACTCTGAAATAATTAG  987

seq1  CAGAATGTGTCAGCCAGTCTTTTTCATAATAGGCAGGGAAAGATGAATAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTGTCAGCCAGTCTTTTTCATAATAGGCAGGGAAAGATGAATAG  1037

seq1  TGAATCTATGAAAAATGATCAAATCTTAAATTATTAATGTGGATAAATAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTATGAAAAATGATCAAATCTTAAATTATTAATGTGGATAAATAC  1087

seq1  AAGTATGGACAAATGTAGCTTCAGAATTTGGGAGGAAGAGGCAAGAATTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGGACAAATGTAGCTTCAGAATTTGGGAGGAAGAGGCAAGAATTC  1137