BAC Information

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BAC

Clone NameB6Ng01-152O10
Chromosome6 (Build37)
Map Location 99,293,482 - 99,440,195
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665963, LOC665979, Foxp1
Downstream geneEif4e3, Gpr27, Prok2, LOC384466, LOC626503, LOC100043703, Rybp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152O10.bB6Ng01-152O10.g
ACCDH948359DH948360
length6231,005
definitionDH948359|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O10, 5' end.DH948360|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,293,482 - 99,294,113)(99,439,190 - 99,440,195)
sequence
gaattcacttaatgactaaatagattctaagtttcctcttagtttgaaca
tagctagaacaataaaaactcaataatcacacaaccagctgatgtgcaga
atctacaagaacaagctctaagcaactctactaccccaccctttccccac
tccacattactaacccaggccagccacacccatctgctttctctccctca
attctaccaagaccaggtcacatcttgtcccagccctggttattcccatg
tctagcttctcctggctgcctccttcttatcaagcatatctcagctcaaa
taccaactcctccaggaagtctaactggactaaaacccaccctccctcca
tcattctgctgcatgtccttcgattggacattgttcttcattataggttt
caagtgtgtcttagactacaagtttggttcttggcagtcttggtaacagt
tgtttttccagaacttaacagccctggctagctcatagagtctcccacaa
tgaatgctacatgggcaaatgaatctttcccaaatcacaccggcttccac
aatactccttcctcccagaaactggaacccttccaagggcaaggtttggc
atttcctgctgatgaggagggga
gaattcagccttgagtatttatttctaggtttcacaatttgtttgtcttc
attgtgggctttcttcttcccctttcttcccttccttccctccctccctg
aggcttgccctgcctctcctcacttgcctttgtaatttccccttttctct
agatcatagtgatgacggacccttagattttttttttttttcatgaagac
tagttgtgtggctgcaatgtaccacggggtagtggctcaggcggtgcaac
agtgaatgtctgtggagtgggttctacaggcgccacagctccctggcttt
ggggtccagggcctctgagaagtgagctttgagtacgggcagtgcacttt
acacaccctggcatctcatcagccacagagagggggcaagattcatgcac
ccaacctacaagtcgtactgtattgactctgtatcatagaactgaggagt
gcgcacggcagatatggccacaggcccagccgtctatcaccacagctttt
caaagggaccttaggagaaacacgtggaaccgtaacttgatcgcagaagt
tgggtcattaacatcgcagaaacagcccttcaggtgtgttggttacactt
tccagactcagtgagtagttcttcattctttacaagatcagccaggtgga
cttggctaacagtgactccatcgtagccgataagcttctttgttaatgag
gccaaagtgggaattcctgcttcttgtgggctggctgccttcactttctt
tcctggggaactgaccactagttctggccagctggcttgtgaatgtgaag
tgtcagaagttgggtgctgtggctagtagctcacaccctgacccctcctg
gggcaaaccatcaccacttcactgcccagtagtcccacgcatacattgtc
tcctcccctgaaagacagtagagtggtgagggttaatgagaaactggcct
ggctttcagacagtttccaggaaatacaggtattatttaaagtgatttag
gaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_99293482_99294113
seq2: B6Ng01-152O10.b_46_668

seq1  GAATTCACTTAATGACTAAATAGATTCTAAGTTTCCTCTTAGTTTGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAATGACTAAATAGATTCTAAGTTTCCTCTTAGTTTGAACA  50

seq1  TAGCTAGAACAATAAAAACTCAATAATCACACAACCAGCTGATGTGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGAACAATAAAAACTCAATAATCACACAACCAGCTGATGTGCAGA  100

seq1  ATCTACAAGAACAAGCTCTAAGCAACTCTACTACCCCACCCTTTCCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAAGAACAAGCTCTAAGCAACTCTACTACCCCACCCTTTCCCCAC  150

seq1  TCCACATTACTAACCCAGGCCAGCCACACCCATCTGCTTTCTCTCCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATTACTAACCCAGGCCAGCCACACCCATCTGCTTTCTCTCCCTCA  200

seq1  ATTCTACCAAGACCAGGTCACATCTTGTCCCAGCCCTGGTTATTCCCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACCAAGACCAGGTCACATCTTGTCCCAGCCCTGGTTATTCCCATG  250

seq1  TCTAGCTTCTCCTGGCTGCCTCCTTCTTATCAAGCATATCTCAGCTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTCTCCTGGCTGCCTCCTTCTTATCAAGCATATCTCAGCTCAAA  300

seq1  TACCAACTCCTCCAGGAAGTCTAACTGGACTAAAACCCACCCTCCCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACTCCTCCAGGAAGTCTAACTGGACTAAAACCCACCCTCCCTCCA  350

seq1  TCATTCTGCTGCATGTCCTTCGATTGGACATTGTTCTTCATTATAGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGCTGCATGTCCTTCGATTGGACATTGTTCTTCATTATAGGTTT  400

seq1  CAAGTGTGTCTCAGACTACAAGTTT-GTTCTTGGCAGTCTTGTTAACAGT  449
      ||||||||||| ||||||||||||| |||||||||||||||| |||||||
seq2  CAAGTGTGTCTTAGACTACAAGTTTGGTTCTTGGCAGTCTTGGTAACAGT  450

seq1  TGTATTTCCAGAACTTAACAGCCCTGGCTAGCTCATAGAGTCTCCCACAA  499
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCCAGAACTTAACAGCCCTGGCTAGCTCATAGAGTCTCCCACAA  500

seq1  GTGATTGCTACATGGGCAAATGAATCATATCCCACATCACACCGGTCTCC  549
       ||| ||||||||||||||||||||| | ||||| |||||||||| || |
seq2  -TGAATGCTACATGGGCAAATGAATC-TTTCCCAAATCACACCGG-CTTC  547

seq1  AACAATACATCCTTCCTCCCAGAAACATGGAATCCTTTCATATGGTCAAT  599
       ||||||| ||||||||||||||||| ||||| |||| |  | || ||| 
seq2  CACAATAC-TCCTTCCTCCCAGAAAC-TGGAACCCTTCC--AAGGGCAAG  593

seq1  GTTTTGCAATTTCCTGCATGAATGAGGAGGGGA  632
      |||| || ||||||||| || ||||||||||||
seq2  GTTTGGC-ATTTCCTGC-TG-ATGAGGAGGGGA  623

seq1: chr6_99439190_99440195
seq2: B6Ng01-152O10.g_68_1072 (reverse)

seq1  TTTTCCTAAATCACTTTAAATAATACCTGTATCTCCTGGAAACTGTCTGA  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTCCTAAATCACTTTAAATAATACCTGTATTTCCTGGAAACTGTCTGA  50

seq1  AAGCCAGGCCAGTTTCTCATTAACCCTCACCACTCTACTGTCTTTCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGCCAGTTTCTCATTAACCCTCACCACTCTACTGTCTTTCAGGG  100

seq1  GAGGAGACAATGTATGCGTGGGACTACTGGGCAGTGAAGTGGGTGATGGT  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGGAGACAATGTATGCGTGGGACTACTGGGCAGTGAAGT-GGTGATGGT  149

seq1  TTGCCCCAGGAGGGGTCAGGGTGTGAGCTACTAGCCACAGCACCCAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCAGGAGGGGTCAGGGTGTGAGCTACTAGCCACAGCACCCAACTT  199

seq1  CTGACACTTCACATTCACAAGCCAGCTGGCCAGAACTAGTGGTCAGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACTTCACATTCACAAGCCAGCTGGCCAGAACTAGTGGTCAGTTCC  249

seq1  CCAGGAAAGAAAGTGAAGGCAGCCAGCCCACAAGAAGCAGGAATTCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAGAAAGTGAAGGCAGCCAGCCCACAAGAAGCAGGAATTCCCAC  299

seq1  TTTGGCCTCATTAACAAAGAAGCTTATCGGCTACGATGGAGTCACTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTCATTAACAAAGAAGCTTATCGGCTACGATGGAGTCACTGTTA  349

seq1  GCCAAGTCCACCTGGCTGATCTTGTAAAGAATGAAGAACTACTCACTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTCCACCTGGCTGATCTTGTAAAGAATGAAGAACTACTCACTGAG  399

seq1  TCTGGAAAGTGTAACCAACACACCTGAAGGGCTGTTTCTGCGATGTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAAGTGTAACCAACACACCTGAAGGGCTGTTTCTGCGATGTTAAT  449

seq1  GACCCAACTTCTGCGATCAAGTTACGGTTCCACGTGTTTCTCCTAAGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAACTTCTGCGATCAAGTTACGGTTCCACGTGTTTCTCCTAAGGTC  499

seq1  CCTTTGAAAAGCTGTGGTGATAGACGGCTGGGCCTGTGGCCATATCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAAAAGCTGTGGTGATAGACGGCTGGGCCTGTGGCCATATCTGCC  549

seq1  GTGCGCACTCCTCAGTTCTATGATACAGAGTCAATACAGTACGACTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCACTCCTCAGTTCTATGATACAGAGTCAATACAGTACGACTTGTA  599

seq1  GGTTGGGTGCATGAATCTTGCCCCCTCTCTGTGGCTGATGAGATGCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGTGCATGAATCTTGCCCCCTCTCTGTGGCTGATGAGATGCCAGG  649

seq1  GTGTGTAAAGTGCACTGCCCGTACTCAAAGCTCACTTCTCAGAGGCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAAAGTGCACTGCCCGTACTCAAAGCTCACTTCTCAGAGGCCCTG  699

seq1  GACCCCAAAGCCAGGGAGCTGTGGCGCCTGTAGAACCCACTCCACAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAAAGCCAGGGAGCTGTGGCGCCTGTAGAACCCACTCCACAGACA  749

seq1  TTCACTGTTGCACCGCCTGAGCCACTACCCCGTGGTACATTGCAGCCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTTGCACCGCCTGAGCCACTACCCCGTGGTACATTGCAGCCACA  799

seq1  CAACTAGTCTTCATGAAAAAAAAAAAAAATCTAAGGGTCCGTCATCACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGTCTTCATGAAAAAAAAAAAAAATCTAAGGGTCCGTCATCACTA  849

seq1  TGATCTAGAGAAAAGGGGAAATTACAAAGGCAAGTGAGGAGAGGCAGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTAGAGAAAAGGGGAAATTACAAAGGCAAGTGAGGAGAGGCAGGGC  899

seq1  AAGCCTCAGGGAGGGAGGGAAGGAAGGGAAGAAAGGGGAAGAAGAAAGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCAGGGAGGGAGGGAAGGAAGGGAAGAAAGGGGAAGAAGAAAGCC  949

seq1  CACAATGAAGACAAACAAATTGTGAAACCTAGAAATAAATACTCAAGGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGAAGACAAACAAATTGTGAAACCTAGAAATAAATACTCAAGGCT  999

seq1  GAATTC  1006
      ||||||
seq2  GAATTC  1005