BAC Information

Click to search

BAC

Clone NameB6Ng01-152P17
Chromosome6 (Build37)
Map Location 18,835,446 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152P17.bB6Ng01-152P17.g
ACCDH948421DH948422
length9781,214
definitionDH948421|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P17, 5' end.DH948422|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccgcatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtcgt
tttatcttattgacagtgtcttttgccttgcagaagctttggagtttcat
gaggtcccatttgtcaattcctgatcttacagcacaagccattgctgttc
tattcaggaatttttcccttgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagatatgtatggatcgatttgca
ttcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgtgtcttcaattctattgcattggt
ctacttgtctgtcagtataccagtaccatgcagtttttatcacaattgct
ctgtagcaaagctttaggtcaggcatattgattccaccagaggttcttct
attcttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcagattgctcttcctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatttgtagattgcttttggcaagatagccatttt
taaaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttcttcttcagagacttgaagttttatcatacag
atctttcatttccttagagtcacgcccagatattttatattatttgtgac
tattgagaagtgtgttgtttccctaatt

gaattctgcattaaccccatctggtcctgggctttttttttggttgggag
actattaatgaatgcttctatttctttagagtatatgggactgtttacat
cgttaacttgatcgtggtttaactttggtacctggtatctgtctagaaat
ttgtccatttcgtccaggttttccagttttgttgagtatagtcttttgta
gaaggatctgatggtgttttggatttcttcagaatctgttgttatgtctc
cctttttatttctgagtttgttaattaggatgctgtccctgtgccctcta
gtgagtctgactaagggtttatctatcttgttgattttctcaaagaacca
gctccttgtttggatgattctttgaatagttcatcttatttctacttggt
tgattttgcccctgagtttggttatttcctgccttctactcctcttgggt
gaatttccttccttttttctagagcttttaggtgtgttgtcaagctgcta
gtgtgttctctctctagtttctttttggaggcactcagagctatttgttt
ccctctttgaaatgatttcacagtgtcccttaagtttgggtatgttgtgg
cttcattttcattaaattctaaaaagtctttaatttctttctttattcct
tccttgaccaagttatcattgagaagagtgttgttcagtttccatgtgaa
tgttggctttccattatttatgttgttattaaagatcaaccttagtccat
ggtgtttctaataggatgcatgggataatttcaatattttttgtatctat
tgaggcctgttttgtgacaaattatatgggtcagttttggagaaggtacc
atgagctgctgagaagaaggtatatcccttttgttttaggataaaatgtt
ctgtagatatctgttagtccatttgtttcataacttctgttagtttcacc
tgtgtccctttttagtttcttgtttcaatgatctattcggtcacatgatg
gaaagtgggttgttggagcctcctactaataatggtgaagagccaaggtg
tgcttggtgctttataagttctcttatatgaatgttgcctgcccttcgta
ttgaagcaccaaatatcacaatgaaaattcctctctgagagaattaacct
tttaagtgattcaggttcctccccttactttttttagaacctgtgatgtg
acagcgcacttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835446_18835968
seq2: B6Ng01-152P17.b_46_568 (reverse)

seq1  AGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAA  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAA  50

seq1  ACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAA  100
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAA  100

seq1  CTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCAT  150
      |||||||||||| ||||||||||||  ||||||||||||| ||||||| |
seq2  CTGGTTGTTATCATGTAGAAGAATGCAAATCGATCCATACATATCTCCTT  150

seq1  GTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAG  200

seq1  ACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGG  250

seq1  CAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGT  299
      || | ||||||| |||||||| |||||||||||||| |||||||| || |
seq2  CACAAGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGAT  300

seq1  AGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCA  349
         |||| |||||||||||||| |||||||||||||| ||||||||||||
seq2  CAGGAATTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTGCAAGGCA  350

seq1  AAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGAT  399
      |||||||| |||||||||| |||| |||||||||||||||||||||||||
seq2  AAAGACACTGTCAATAAGATAAAACGACCACCAACAGATTGGGAAAGGAT  400

seq1  CTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAG  450

seq1  AACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGG  499
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  AACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAA-AAATGC  499

seq1  GGCTCAGAACTGAACAAAGAATTC  523
      ||||||||||||||||||||||||
seq2  GGCTCAGAACTGAACAAAGAATTC  523


| Home | SequenceCutter | Blast | Download |