BAC Information

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BAC

Clone NameB6Ng01-153F13
Chromosome6 (Build37)
Map Location 59,953,046 - 60,017,623
singlet/doubletdoublet
Overlap genenone
Upstream geneD430015B01Rik, Tigd2, Gprin3, EG634166, EG627108
Downstream geneEG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018, Mmrn1, LOC100041756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153F13.bB6Ng01-153F13.g
ACCDH948686DH948687
length1,045910
definitionDH948686|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F13, 5' end.DH948687|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,953,046 - 59,954,086)(60,016,725 - 60,017,623)
sequence
gaattctttgtttggctctgagccccttttttttaacgaggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattggtcc
tctatctgatttaggataggtaaagatcctttaccaatctgtttgtgggc
tttgttttactctgatccccattttttaatgaggttatttggttttctgg
agtccaccttcttgagctctttatatatattggatattagtcctctatct
gatttaggataggtaaagatcctttaccaatctgttggtgggctttttgt
cttattgacggtttcttttgccttacagaagctttgccatttcatgaggt
cccatttgtcaattcttgatcttacagcacaagccattgctgttttgttc
aggaacatttccaaaagattcttcacagtgaggtttcaaacattgctgtt
gtcatatttgatatcaggatttcctttactcatattgacatttattaata
ttttacttttactaacatagtttccaatacatgatatatttttactgtgt
tcttatttttacgattttaatataaggaaagattcaaacatcaatatgtg
agcactcaagtttaatatattttagctgcgttcacttgcaactccagatt
tctctaattactattaaatcccaatcatcttcttattccagaaacatttt
caatgccttgatttccattttaataaattgtttctttctaatgaaatgca
ttttctcacctgacatagtacgtcatgctcattaaactgtatttcttaaa
atagtttaacctcatgcatcagaatacactctggactatttttcggctgt
tgctcccataaatttacttgctagatagatagtatttgaatttccctgaa
aactaaaaaataatatgaattaaagtcatatttagatcatatatgtttga
gttttcacacccatatgtttgcacatatctcctgtaacttcacttatgag
ggatttcttatggccttgggtgggtactacatatacaatagtgca
gaattcagagacctttagaggcagtataaaaattctagattattgagagt
ctgggttgactgttgtctattcattgttggtcctgagtcctggtcattca
gtgttactgattatggtttgttaattgtattgctcaaaggtgatacgaga
agtgactcaggatctctctctctctctctctctcctatattttctctccg
atctcgtgatagaggggaaaatgtgtaaaaaaaaaaaaatggacaagggt
aaaaggtagaagggtataagatagaagaatttataaattatcagagatca
gcaacacttcatctgttcttcctcatgatatttaaattattgttgcccat
acgtgctcatccacctagatatggcctccttacactagtgcctgttatcc
tcaggaagattaggctcaatctctcactaagtaatcttaaattatagtca
tgtttgaatagctcaaaacctgcctaacttgggcttgcagtgtgttaata
aaaaatgcttggtctttgtgtctcttcttcaggaattaaaatgggctaga
acaggcagaaaatcctggtttttgtttgtttgtttgtttgtttgtttttc
tttcagatggactgaagctataaaaaagaattaactgctttgagagggaa
actgggatttaaaaatgtactaaggttatttgcttctcaactttctataa
tgtcagtatgggtccttatttttcttctttagggatttaaggatcttgag
ccaagtgttgcttatgaatggcagatgtgtgttcccctggttgcccaaac
tggatgcatagaaaaattgctggtgttactgaaaaacaagaaagggggaa
tgccttcatttttttggaggggctgttttctttctaatatttttttcaat
gagatacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_59953046_59954086
seq2: B6Ng01-153F13.b_46_1090

seq1  GAATTCTTTGTTTGGCTCTGAGCCCCTTTTTTTTAACGAGGTTATTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTGGCTCTGAGCCCCTTTTTTTTAACGAGGTTATTTGAT  50

seq1  TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTGGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTGGTCC  100

seq1  TCTATCTGATTTAGGATAGGTAAAGATCCTTTACCAATCTGTTTGTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGATTTAGGATAGGTAAAGATCCTTTACCAATCTGTTTGTGGGC  150

seq1  TTTGTTTTACTCTGATCCCCATTTTTTAATGAGGTTATTTGGTTTTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTACTCTGATCCCCATTTTTTAATGAGGTTATTTGGTTTTCTGG  200

seq1  AGTCCACCTTCTTGAGCTCTTTATATATATTGGATATTAGTCCTCTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACCTTCTTGAGCTCTTTATATATATTGGATATTAGTCCTCTATCT  250

seq1  GATTTAGGATAGGTAAAGATCCTTTACCAATCTGTTGGTGGGCTTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGGATAGGTAAAGATCCTTTACCAATCTGTTGGTGGGCTTTTTGT  300

seq1  CTTATTGACGGTTTCTTTTGCCTTACAGAAGCTTTGCCATTTCATGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGACGGTTTCTTTTGCCTTACAGAAGCTTTGCCATTTCATGAGGT  350

seq1  CCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTTTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTTTGTTC  400

seq1  AGGAACATTTCCAAAAGATTCTTCACAGTGAGGTTTCAAACATTGCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATTTCCAAAAGATTCTTCACAGTGAGGTTTCAAACATTGCTGTT  450

seq1  GTCATATTTGATATCAGGATTTCCTTTACTCATATTGACATTTATTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATTTGATATCAGGATTTCCTTTACTCATATTGACATTTATTAATA  500

seq1  TTTTACTTTTACTAACATAGTTTCCAATACATGATATATTTTTACTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTTACTAACATAGTTTCCAATACATGATATATTTTTACTGTGT  550

seq1  TCTTATTTTTACGATTTTAATATAAGGAAAGATTCAAACATCAATATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTTTACGATTTTAATATAAGGAAAGATTCAAACATCAATATGTG  600

seq1  AGCACTCAAGTTTAATATATTTTAGCTGCGTTCACTTGCAACTCCAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCAAGTTTAATATATTTTAGCTGCGTTCACTTGCAACTCCAGATT  650

seq1  TCTCTAATTACTATTAAATCCCAATCATCTTCTTATTCCAGAAACATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATTACTATTAAATCCCAATCATCTTCTTATTCCAGAAACATTTT  700

seq1  CAATGCCTTGATTTCCATTTTAATAAATTGTTTC-TTCTAATGAAATGCA  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAATGCCTTGATTTCCATTTTAATAAATTGTTTCTTTCTAATGAAATGCA  750

seq1  TTTTCTCACCTGACATAGTACGTCATGCTCATTAAACTGTATTTCTTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCACCTGACATAGTACGTCATGCTCATTAAACTGTATTTCTTAAA  800

seq1  ATAG-TTAACCTCATGCATCAGAATACACTCTGGACTA-TTTTCGGCTGT  847
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATAGTTTAACCTCATGCATCAGAATACACTCTGGACTATTTTTCGGCTGT  850

seq1  TGCTCCCATAAATTTACTTGCTAGATAGATAGTA-TTGAATTTCCCTGAA  896
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGCTCCCATAAATTTACTTGCTAGATAGATAGTATTTGAATTTCCCTGAA  900

seq1  AACTAAAAAATAATATGAATTAAAGTCATAATTCAGATCATATATGTTTG  946
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  AACTAAAAAATAATATGAATTAAAGTCAT-ATTTAGATCATATATGTTTG  949

seq1  AGTTTTCACACCCATATGTTTGCACATAATCTCCTGTAACTTCACTTATG  996
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTTTTCACACCCATATGTTTGCACAT-ATCTCCTGTAACTTCACTTATG  998

seq1  AGGGATATCTTATGGCCTT-GGTAGGTACTACATATAC-ATAGTGCA  1041
      |||||| |||||||||||| ||| |||||||||||||| ||||||||
seq2  AGGGATTTCTTATGGCCTTGGGTGGGTACTACATATACAATAGTGCA  1045

seq1: chr6_60016725_60017623
seq2: B6Ng01-153F13.g_70_979 (reverse)

seq1  CATGTATCTCATTGAAAATATTGTGTGAAAG-AAACAGCCCCTCAGAAAA  49
      |||||||||||||||||| | | |  ||||| ||||||||||||  ||||
seq2  CATGTATCTCATTGAAAAAAATATTAGAAAGAAAACAGCCCCTCCAAAAA  50

seq1  ATTGAAGGCAAT-CCCCTTTCTTGTTTTTCAGTAACACCAGC-ACTTTTC  97
      | |||||||| | ||||||||||||||||||||||||||||| | |||||
seq2  AATGAAGGCATTCCCCCTTTCTTGTTTTTCAGTAACACCAGCAATTTTTC  100

seq1  TATGCATCCAGTTTGGCCAAC--AGGGAACACACATCTGCCATTCATAAG  145
      |||||||||||||||| ||||   ||||||||||||||||||||||||||
seq2  TATGCATCCAGTTTGGGCAACCAGGGGAACACACATCTGCCATTCATAAG  150

seq1  CAACACTTGGCTC-AGATCCTTAAAT-CCTAAAGAAG-AAAATAAGGACC  192
      ||||||||||||| |||||||||||| |||||||||| ||||||||||||
seq2  CAACACTTGGCTCAAGATCCTTAAATCCCTAAAGAAGAAAAATAAGGACC  200

seq1  CATACTGACATTATAG-AAGTTGAGAAGCAAATAACCTTAGTACA-TTTT  240
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  CATACTGACATTATAGAAAGTTGAGAAGCAAATAACCTTAGTACATTTTT  250

seq1  AAATCCCAGTTTCCCTCTCACAGCAGTTAATTC-TTTTTATAGCTTCAGT  289
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  AAATCCCAGTTTCCCTCTCAAAGCAGTTAATTCTTTTTTATAGCTTCAGT  300

seq1  CCATCTGAAAGAAAAACAAACAAACAAACAAACAAACAAAAACCAGGATT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGAAAGAAAAACAAACAAACAAACAAACAAACAAAAACCAGGATT  350

seq1  TTCTGCCTGTTCTAGCCCATTTTAATTCCTGAAGAAGAGACACAAAGACC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTGTTCTAGCCCATTTTAATTCCTGAAGAAGAGACACAAAGACC  400

seq1  AAGCATTTTTTATTAACACACTGCAAGCCCAAGTTAGGCAGGTTTTGAGC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTTTTATTAACACACTGCAAGCCCAAGTTAGGCAGGTTTTGAGC  450

seq1  TATTCAAACATGACTATAATTTAAGATTACTTAGTGAGAGATTGAGCCTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAACATGACTATAATTTAAGATTACTTAGTGAGAGATTGAGCCTA  500

seq1  ATCTTCCTGAGGATAACAGGCACTAGTGTAAGGAGGCCATATCTAGGTGG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTGAGGATAACAGGCACTAGTGTAAGGAGGCCATATCTAGGTGG  550

seq1  ATGAGCACGTATGGGCAACAATAATTTAAATATCATGAGGAAGAACAGAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACGTATGGGCAACAATAATTTAAATATCATGAGGAAGAACAGAT  600

seq1  GAAGTGTTGCTGATCTCTGATAATTTATAAATTCTTCTATCTTATACCCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTGCTGATCTCTGATAATTTATAAATTCTTCTATCTTATACCCT  650

seq1  TCTACCTTTTACCCTTGTCCATTTTTTTTTTTTTACACATTTTCCCCTCT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTTTTACCCTTGTCCATTTTTTTTTTTTTACACATTTTCCCCTCT  700

seq1  ATCACGAGATCGGAGAGAAAATATAGGAGAGAGAGAGAGAGAGAGAGATC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGAGATCGGAGAGAAAATATAGGAGAGAGAGAGAGAGAGAGAGATC  750

seq1  CTGAGTCACTTCTCGTATCACCTTTGAGCAATACAATTAACAAACCATAA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCACTTCTCGTATCACCTTTGAGCAATACAATTAACAAACCATAA  800

seq1  TCAGTAACACTGAATGACCAGGACTCAGGACCAACAATGAATAGACAACA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAACACTGAATGACCAGGACTCAGGACCAACAATGAATAGACAACA  850

seq1  GTCAACCCAGACTCTCAATAATCTAGAATTTTTATACTGCCTCTAAAGGT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACCCAGACTCTCAATAATCTAGAATTTTTATACTGCCTCTAAAGGT  900

seq1  CTCTGAATTC  899
      ||||||||||
seq2  CTCTGAATTC  910