BAC Information

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BAC

Clone NameB6Ng01-153I07
Chromosome6 (Build37)
Map Location 110,779,144 - 110,929,207
singlet/doubletdoublet
Overlap geneGrm7
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153I07.bB6Ng01-153I07.g
ACCDH948808DH948809
length633778
definitionDH948808|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I07, 5' end.DH948809|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,928,575 - 110,929,207)(110,779,144 - 110,779,920)
sequence
gaattctctatcaggtaaatatcagagaaaagcaagtgtagctgtgcagg
ctaccaattcatcctagagcaatggaaactcagcttatagcatctgtcag
ggcctgatatacagtaagcactgcatatacggagtattgcttaccattga
agaaactatttttagttactgctaaagacaacataagcacacaggtggca
gtggttattagatgaacatatgagtaataaaaccatagtttaaagtttag
actggcttgcttttgttcctctcagcactactttttttttcttcatctta
tcataagaccaacatcccagagcactttggctattactttctcactaaaa
tttgcaattatatatttgtgtgatgactccactaatgttcatctctgaca
atctgagaggcagaggtgtttctattttagttttgcccttcactgacatt
cgaaactatcaagtgtctgactgataacactaaaatatttattagatgaa
ccgataggtgagtatggaaagaatgattagagaatgattgcacaagtgac
agaagagagatgaaaaaagcagtcagagtaatatggcaggagtagaggga
gagagggaaggaaggaagtaggatgaagtgttg
gaattcagaaccaagtgcatattagacacactcagtttcaccaacctaca
cactcaacactcattgctgaattctttttctctcccatggttgtcaatat
tctgaaaatgtgctgtaaagcaatttccagcaacaatggaatgcagccct
aattaccaccttctagttggcctcatgaccataaggataaataactgatc
ctcctgggtttactgttttcttaagctatgtctgtaaattaaggcatgtg
tgtgtgtgtgtgtgtgtgtgtgtgtattctacaatttttacttttaattt
ttgatgatttgatatgatgtgaactgaagatactgactcatctgtagtga
aatcctatctgggtatcatataatatgaggaaagatacaagttcaaccat
ctagtgattgggtagcaaagtagatttcctatggagattcaatggaagat
agatcatggagtttaaataacttgtatcagttccaaggacatgaaggaaa
cgttgtgtcatctaataggatgctggtagtgattgaacttgaatttggtt
gagcccttctgcaaataaaagaagaaaacaaacaaatctaaaggatgagt
tttattataaagaaaattagaacaaaattaatacaataccagctatttga
gcaatattaatcagataggaacacaagaaataaagaaggtccctttttac
caaatactccagatgcattttctggatccacggactttgacataatttca
tcctggaaaaaaaaatcatatatcaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110928575_110929207
seq2: B6Ng01-153I07.b_38_670 (reverse)

seq1  CAACACTTCATCCTACTTCCTTCCTTCCCTCTCTCCCTCTACTCCTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTTCATCCTACTTCCTTCCTTCCCTCTCTCCCTCTACTCCTGCCA  50

seq1  TATTACTCTGACTGCTTTTTTCATCTCTCTTCTGTCACTTGTGCAATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCTGACTGCTTTTTTCATCTCTCTTCTGTCACTTGTGCAATCAT  100

seq1  TCTCTAATCATTCTTTCCATACTCACCTATCGGTTCATCTAATAAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATCATTCTTTCCATACTCACCTATCGGTTCATCTAATAAATATT  150

seq1  TTAGTGTTATCAGTCAGACACTTGATAGTTTCGAATGTCAGTGAAGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTATCAGTCAGACACTTGATAGTTTCGAATGTCAGTGAAGGGCA  200

seq1  AAACTAAAATAGAAACACCTCTGCCTCTCAGATTGTCAGAGATGAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAATAGAAACACCTCTGCCTCTCAGATTGTCAGAGATGAACATT  250

seq1  AGTGGAGTCATCACACAAATATATAATTGCAAATTTTAGTGAGAAAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGTCATCACACAAATATATAATTGCAAATTTTAGTGAGAAAGTAA  300

seq1  TAGCCAAAGTGCTCTGGGATGTTGGTCTTATGATAAGATGAAGAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAAAGTGCTCTGGGATGTTGGTCTTATGATAAGATGAAGAAAAAAA  350

seq1  AAGTAGTGCTGAGAGGAACAAAAGCAAGCCAGTCTAAACTTTAAACTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTGCTGAGAGGAACAAAAGCAAGCCAGTCTAAACTTTAAACTATG  400

seq1  GTTTTATTACTCATATGTTCATCTAATAACCACTGCCACCTGTGTGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTACTCATATGTTCATCTAATAACCACTGCCACCTGTGTGCTTA  450

seq1  TGTTGTCTTTAGCAGTAACTAAAAATAGTTTCTTCAATGGTAAGCAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCTTTAGCAGTAACTAAAAATAGTTTCTTCAATGGTAAGCAATAC  500

seq1  TCCGTATATGCAGTGCTTACTGTATATCAGGCCCTGACAGATGCTATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTATATGCAGTGCTTACTGTATATCAGGCCCTGACAGATGCTATAAG  550

seq1  CTGAGTTTCCATTGCTCTAGGATGAATTGGTAGCCTGCACAGCTACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTCCATTGCTCTAGGATGAATTGGTAGCCTGCACAGCTACACTT  600

seq1  GCTTTTCTCTGATATTTACCTGATAGAGAATTC  633
      |||||||||||||||||||||||||||||||||
seq2  GCTTTTCTCTGATATTTACCTGATAGAGAATTC  633

seq1: chr6_110779144_110779920
seq2: B6Ng01-153I07.g_67_844

seq1  GAATTCAGAACCAAGTGCATATTAGACACACTCAGTTTCACCAACCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACCAAGTGCATATTAGACACACTCAGTTTCACCAACCTACA  50

seq1  CACTCAACACTCATTGCTGAATTCTTTTTCTCTCCCATGGTTGTCAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACACTCATTGCTGAATTCTTTTTCTCTCCCATGGTTGTCAATAT  100

seq1  TCTGAAAATGTGCTGTAAAGCAATTTCCAGCAACAATGGAATGCAGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAATGTGCTGTAAAGCAATTTCCAGCAACAATGGAATGCAGCCCT  150

seq1  AATTACCACCTTCTAGTTGGCCTCATGACCATAAGGATAAATAACTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCACCTTCTAGTTGGCCTCATGACCATAAGGATAAATAACTGATC  200

seq1  CTCCTGGGTTTACTGTTTTCTTAAGCTATGTCTGTAAATTAAGGCATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGTTTACTGTTTTCTTAAGCTATGTCTGTAAATTAAGGCATGTG  250

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTATTCTACAATTTTTACTTTTAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTATTCTACAATTTTTACTTTTAATTT  300

seq1  TTGATGATTTGATATGATGTGAACTGAAGATACTGACTCATCTGTAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGATTTGATATGATGTGAACTGAAGATACTGACTCATCTGTAGTGA  350

seq1  AATCCTATCTGGGTATCATATAATATGAGGAAAGATACAAGTTCAACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTATCTGGGTATCATATAATATGAGGAAAGATACAAGTTCAACCAT  400

seq1  CTAGTGATTGGGTAGCAAAGTAGATTTCCTATGGAGATTCAATGGAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGATTGGGTAGCAAAGTAGATTTCCTATGGAGATTCAATGGAAGAT  450

seq1  AGATCATGGAGTTTAAATAACTTGTATCAGTTCCAAGGACATGAAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATGGAGTTTAAATAACTTGTATCAGTTCCAAGGACATGAAGGAAA  500

seq1  CGTTGTGTCATCTAATAGGATGCTGGTAGTGATTGAACTTGAATTTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTGTCATCTAATAGGATGCTGGTAGTGATTGAACTTGAATTTGGTT  550

seq1  GAGCCCTTCTGCAAATAAAAGAAG-AAACAAACAAATCTAAAGGATGAGT  599
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAGCCCTTCTGCAAATAAAAGAAGAAAACAAACAAATCTAAAGGATGAGT  600

seq1  TTTATTAT-AAGAAAATTAGAAC-AAATTAATACAATACCAGCTATTTGA  647
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  TTTATTATAAAGAAAATTAGAACAAAATTAATACAATACCAGCTATTTGA  650

seq1  GCAATATTAATCAGATAAGGAACACAAGAAATAAAGCAAGGTCCC-TTTT  696
      |||||||||||||||| ||||||||||||||||||| |||||||| ||||
seq2  GCAATATTAATCAGAT-AGGAACACAAGAAATAAAG-AAGGTCCCTTTTT  698

seq1  ACCAAATACCTCCAGATGCA-TTTCTGGATCCACGGACTTTGACAAAATT  745
      |||||||| ||||||||||| |||||||||||||||||||||||| ||||
seq2  ACCAAATA-CTCCAGATGCATTTTCTGGATCCACGGACTTTGACATAATT  747

seq1  TCATCCTGGAAAAAAAAAATCATATATCAACA  777
      ||||||||| ||||||||||||||||||||||
seq2  TCATCCTGG-AAAAAAAAATCATATATCAACA  778