BAC Information

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BAC

Clone NameB6Ng01-153N14
Chromosome6 (Build37)
Map Location 18,835,442 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153N14.bB6Ng01-153N14.g
ACCDH949046DH949047
length9611,187
definitionDH949046|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N14, 5' end.DH949047|Mus musculus domesticus DNA, BAC clone: B6Ng01-153N14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tgtccgatttgggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgctttgcagaagctttgcaattttat
gaggtcccatttatcgattcttgattttacagcacaagccattgctgttc
tattcaggaatttttcccctgtatccatatctttgaggcttttccctact
ttctcctctataagtttaagtgtctctggttttatatggagttccttaat
ccattcagatttgaccttatacaaggagatagaaatggatcaattcacat
tcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtatgggttcatctctggatcttcagttctgttccattggtc
tacttttctggcactataccgaatggcagagaagcaccagaaaaaatgtt
caacatccttaatcaccagggaaatgcaaatcaaaaaacaaccctaagat
tccacttcactccagtcaaaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctgggc
atatatccagaagatgtccctaccggtagaagacacatgctccactatgt
tcatagcagccttgttataatagcagaagcgggaaagaacccagatgccc
ctcacagagga

gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaagggcgtttttttctattagtaaaggagataggatagctcagct
gctgctcctccctgataataccagggagaaatctgcaggacctgagataa
agaaaatgggctcctcaggaaatgattctgcctatttggttgtatcttta
aatgatagacctaagctccgccttaagattaatggaaaagagtttgaagg
catccttgataccggagcagataaaagtataatttctacacattggtggc
ccaaagcatggcccaccacagagtcatctcattcattacagggcctaggt
tatcaatcatgtcccactataagctccattgccttgacgtgggaatcctc
tgaaggacagcaagggaaattcataccttatgtgctcccactcccggtta
acctctggggaagggatattatgcagcatttgggccttattttgtccaat
gaaaacaccccatcagagggtattcagctaaagcaaaaatatcatggcaa
agatgggttataaagaaggaaaagggttaggacatcagaacaggaaggat
agagcccatcttcacctaatggaaaccagacagacaggggctgggttttc
ctagcggcattggggcagcacgacccattcatggaaaacaggggacccat
gtgggtcctattgggaccttcctctgaaaactagaagctggatcactggt
gagacaataaaataagcaattgagcattactccctgaaatccaatttgga
taaaagtcgaatggaacgtctgactaaccttaggcagacctattggctca
gtccgattgctacgcgatctacgataggtatactgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-153N14.b_50_575 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  CCAGAGATGAACCCATACACCTATGGTCACTTGATCTTTGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| ||||||||||||||||| |||||||   |||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGTGAATTGATCCATTTCTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||| ||||||||||||| | ||||| |||||||| || ||||||||
seq2  CCTTGTA-TAAGGTCAAATCTGAATGGATTAAGGAACTCCATATAAAACC  199

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||| |||||||||||||||||||| |||||||||||  ||||||
seq2  AGAGACACTTAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTCAAAGATA  249

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||  | ||||||||| |||||||| |||||||||||||| |||||||| 
seq2  TGGATACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTA  299

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      |  |  |||||||| ||||||||||| || ||| | ||||| ||||||||
seq2  AAATCAAGAATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAA  349

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
       ||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  AGCAAAAGACACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAA  399

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      |||||||||||||||| ||||| || ||||||||||||||||| ||||||
seq2  GGATCTTTACCTATCCCAAATCGGACAGGGGACTAATATCCAATATATAT  449

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAA-AA  498

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      |||||||||||| |||||||||||||||
seq2  ATGGGGCTCAGAGCTGAACAAAGAATTC  526


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