BAC Information

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BAC

Clone NameB6Ng01-154M14
Chromosome6 (Build37)
Map Location 12,803,510 - 12,940,776
singlet/doubletdoublet
Overlap geneLOC667735
Upstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879, Thsd7a
Downstream geneLOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168, B630005N14Rik, Gpr85, 2610001J05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154M14.bB6Ng01-154M14.g
ACCDH949739DH949740
length1,1521,107
definitionDH949739|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M14, 5' end.DH949740|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,939,621 - 12,940,776)(12,803,510 - 12,804,621)
sequence
gaattccccacaaccctcagggccaaggaataacagaaagaacacatcag
tgtgtattcatttaatttgacaaattataacacaggacttcattcataaa
ttttattgaggggctggtaagatggctcagcggttaaacaaacactagct
gcttgctcttctggaggtcctgagttcaattcctgacaaccacatggtga
ctcacaaccatctgtaatgggatctgattccctcttctggtttgtctgaa
gacagctacagtgtattcatataaatgaaataaataaatcttaaaaataa
ataaataaatttaattgaaatgagaaagaaaaatcaccaatcaaattagg
ttttgccaccttattttaaaattagttagtcttcaatggctatgagtgat
aggagaatattttttgtattatcaattccttctttatttgttcagatgga
tgaaagaatcagcagaggaaaaactgccaagtattattgtcatacctaat
tcaagtagggtagaaacccatctatgagcatcatgaggttaaataaaaat
cagtaaaaatgatagtagattttattttgttaaattaattcacaatgaaa
gaacatatacaaacccaatataatcaactgaagttccataaaacaactat
tatttctcaacagttaagaacattaaccaaatagtagtggctcctgggga
atcaataccctctctgatgtcacacacacacacacacacacacacacaca
cagagggagagagagagagagagagagagagagagagagagagagagaga
gagagagagagagagagagaatatatattttttcctaaaaccagttattt
taaaaagagtatgtgagtatgtgtcccatctgctgtgacacccacacagt
agtcccttgactgaaaacaaattgagttgcagaactgaaccttgtttaat
ttacctagaggttcttttgaaaaaatttaaatatgcctagtaaaatctga
tgttactcttgaattgttttattcagttcatgaattacataagcactgcg
atatataaagtaagatgcctatggaattttttattaatgagtcaactgaa
taagagggcctaattggtcctcacccatgctgtggtatttttcccctatc
aa
gaattcaaaacacagcaatatgaagcagggtctttcaaacaaacaccacc
aaaaccaaaaacaggattactttcaagttaaagcctagtaaagagggata
agaagcagagaagagaggatgatcagaaatataattcaaaggagagtgag
gaatagtaaaaaggtatttggaacagaccagcaaatacatagctgtacaa
ttctctaaatcaagaaacagggaatatggtttccagggaaatatatcact
gaccaaattgataatctcaaggttctaattgtacattcatagaatccagc
aagatgcagtatgcctaagaaaaacacaatacataattatcaaacagaaa
ccaaacaagaccaattttttaattcccttgttgctgtgtaataataattt
attaacaaagagctgtgtcaagaatcaaggtggataaatcttccttgaaa
attaaacaataattgttattactcatttatctctcttaaaacttctgaga
cttagcctgttgctatggattctaatgctaaatactggccctggttgccc
cagggatgaggagaacctcacattcaccaaatgaggatgctatgtacttt
gaaaacaattggttaaataaagatgcctacaatctggagttgggcagaag
agaggtaggcagggtctaagttcccaggcttgtggtcagagaccacaaag
gagagagagagagagagagagagagagagagagagagagagagagagaga
gagagagagagagaccatggggtaggtgaattatgagaatgtggccatga
aggctggccagttggaataagagtggcccagaggaaacaaggaaacatat
catggagttattgacagagaagagacaaaatagtttagagggctgatatc
tgtccagctctagtactttttaggctaattacaaatataaaggtttttat
gtcatttatttgggagccaaatgatcaaaggttggaaagaacaccccatt
taattttcactatattattttttcagtgtctatgagatatattttaaatt
gttagcatactcactaggcaacttgaaatgctcttaacagctttttatac
tttgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_12939621_12940776
seq2: B6Ng01-154M14.b_46_1197 (reverse)

seq1  TTGATAGAGAGAAAAATA-CACAAC-TGGGTGA-GACCAATTAGGCCTTT  47
      ||||||| | |||||||| |||| | ||||||| ||||||||||||| | 
seq2  TTGATAG-GGGAAAAATACCACAGCATGGGTGAGGACCAATTAGGCCCTC  49

seq1  CTAATTTCAGTTGACTCCACTAATAAAAAATTCATTGTGCATTCTTACTA  97
       ||  ||||||||||| || |||||||||||||  |  ||| ||||||| 
seq2  TTA--TTCAGTTGACT-CATTAATAAAAAATTCCATAGGCA-TCTTACTT  95

seq1  TATTATATCGCAAGTGCTAATGTAATTCATGAACTGAATAAAAC-ACTCA  146
      || |||||||| |||||| ||||||||||||||||||||||||| | |||
seq2  TA-TATATCGC-AGTGCTTATGTAATTCATGAACTGAATAAAACAATTCA  143

seq1  AGAGTAACCTTCAGATTTTACTAGGCATATTTTAATTCTTTCAAAAGAAC  196
      ||||||| | |||||||||||||||||||||| |||| ||||||||||||
seq2  AGAGTAA-CATCAGATTTTACTAGGCATATTTAAATTTTTTCAAAAGAAC  192

seq1  CTCTAAGTAAA-TAAACAAGGTTCATGTCTGCAACTCAATTTGTTTTCAG  245
      ||||| ||||| |||||||||||||  |||||||||||||||||||||||
seq2  CTCTAGGTAAATTAAACAAGGTTCAGTTCTGCAACTCAATTTGTTTTCAG  242

seq1  TCAAGGGACTACTTGTGTGGGTGTCACAGCAGATGGGACACATACTCACA  295
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGACTAC-TGTGTGGGTGTCACAGCAGATGGGACACATACTCACA  291

seq1  TACTCTTTTTAAAATAACTGGTTTTAGGAATATATATATATTCTCTCTCT  345
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  TACTCTTTTTAAAATAACTGGTTTTAGGAAAAAATATATATTCTCTCTCT  341

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  391

seq1  CTCTCCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACATCAGAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACATCAGAG  441

seq1  AGGGTATTGATTCCCCAGGAGCCACTACTATTTGGTTAATGTTCTTAACT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATTGATTCCCCAGGAGCCACTACTATTTGGTTAATGTTCTTAACT  491

seq1  GTTGAGAAATAATAGTTGTTTTATGGAACTTCAGTTGATTATATTGGGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAAATAATAGTTGTTTTATGGAACTTCAGTTGATTATATTGGGTT  541

seq1  TGTATATGTTCTTTCATTGTGAATTAATTTAACAAAATAAAATCTACTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTTCTTTCATTGTGAATTAATTTAACAAAATAAAATCTACTAT  591

seq1  CATTTTTACTGATTTTTATTTAACCTCATGATGCTCATAGATGGGTTTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTACTGATTTTTATTTAACCTCATGATGCTCATAGATGGGTTTCT  641

seq1  ACCCTACTTGAATTAGGTATGACAATAATACTTGGCAGTTTTTCCTCTGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACTTGAATTAGGTATGACAATAATACTTGGCAGTTTTTCCTCTGC  691

seq1  TGATTCTTTCATCCATCTGAACAAATAAAGAAGGAATTGATAATACAAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTTCATCCATCTGAACAAATAAAGAAGGAATTGATAATACAAAA  741

seq1  AATATTCTCCTATCACTCATAGCCATTGAAGACTAACTAATTTTAAAATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTCCTATCACTCATAGCCATTGAAGACTAACTAATTTTAAAATA  791

seq1  AGGTGGCAAAACCTAATTTGATTGGTGATTTTTCTTTCTCATTTCAATTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCAAAACCTAATTTGATTGGTGATTTTTCTTTCTCATTTCAATTA  841

seq1  AATTTATTTATTTATTTTTAAGATTTATTTATTTCATTTATATGAATACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTATTTATTTTTAAGATTTATTTATTTCATTTATATGAATACA  891

seq1  CTGTAGCTGTCTTCAGACAAACCAGAAGAGGGAATCAGATCCCATTACAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTGTCTTCAGACAAACCAGAAGAGGGAATCAGATCCCATTACAG  941

seq1  ATGGTTGTGAGTCACCATGTGGTTGTCAGGAATTGAACTCAGGACCTCCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTGAGTCACCATGTGGTTGTCAGGAATTGAACTCAGGACCTCCA  991

seq1  GAAGAGCAAGCAGCTAGTGTTTGTTTAACCGCTGAGCCATCTTACCAGCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCAAGCAGCTAGTGTTTGTTTAACCGCTGAGCCATCTTACCAGCC  1041

seq1  CCTCAATAAAATTTATGAATGAAGTCCTGTGTTATAATTTGTCAAATTAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATAAAATTTATGAATGAAGTCCTGTGTTATAATTTGTCAAATTAA  1091

seq1  ATGAATACACACTGATGTGTTCTTTCTGTTATTCCTTGGCCCTGAGGGTT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATACACACTGATGTGTTCTTTCTGTTATTCCTTGGCCCTGAGGGTT  1141

seq1  GTGGGGAATTC  1156
      |||||||||||
seq2  GTGGGGAATTC  1152

seq1: chr6_12803510_12804621
seq2: B6Ng01-154M14.g_67_1173

seq1  GAATTCAAAACACAGCAATATGAAGCAGGGTCTTTCAAACAAACACCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACACAGCAATATGAAGCAGGGTCTTTCAAACAAACACCACC  50

seq1  AAAACCAAAAACAGGATTACTTTCAAGTTAAAGCCTAGTAAAGAGGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAAACAGGATTACTTTCAAGTTAAAGCCTAGTAAAGAGGGATA  100

seq1  AGAAGCAGAGAAGAGAGGATGATCAGAAATATAATTCAAAGGAGAGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGAGAAGAGAGGATGATCAGAAATATAATTCAAAGGAGAGTGAG  150

seq1  GAATAGTAAAAAGGTATTTGGAACAGACCAGCAAATACATAGCTGTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTAAAAAGGTATTTGGAACAGACCAGCAAATACATAGCTGTACAA  200

seq1  TTCTCTAAATCAAGAAACAGGGAATATGGTTTCCAGGGAAATATATCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAATCAAGAAACAGGGAATATGGTTTCCAGGGAAATATATCACT  250

seq1  GACCAAATTGATAATCTCAAGGTTCTAATTGTACATTCATAGAATCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAATTGATAATCTCAAGGTTCTAATTGTACATTCATAGAATCCAGC  300

seq1  AAGATGCAGTATGCCTAAGAAAAACACAATACATAATTATCAAACAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCAGTATGCCTAAGAAAAACACAATACATAATTATCAAACAGAAA  350

seq1  CCAAACAAGACCAATTTTTTAATTCCCTTGTTGCTGTGTAATAATAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAAGACCAATTTTTTAATTCCCTTGTTGCTGTGTAATAATAATTT  400

seq1  ATTAACAAAGAGCTGTGTCAAGAATCAAGGTGGATAAATCTTCCTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACAAAGAGCTGTGTCAAGAATCAAGGTGGATAAATCTTCCTTGAAA  450

seq1  ATTAAACAATAATTGTTATTACTCATTTATCTCTCTTAAAACTTCTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACAATAATTGTTATTACTCATTTATCTCTCTTAAAACTTCTGAGA  500

seq1  CTTAGCCTGTTGCTATGGATTCTAATGCTAAATACTGGCCCTGGTTGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTGTTGCTATGGATTCTAATGCTAAATACTGGCCCTGGTTGCCC  550

seq1  CAGGGATGAGGAGAACCTCACATTCACCAAATGAGGATGCTATGTACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGAGGAGAACCTCACATTCACCAAATGAGGATGCTATGTACTTT  600

seq1  GAAAACAATTGGTTAAATAAAGATGCCTACAATCTGGAGTTGGGCAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAATTGGTTAAATAAAGATGCCTACAATCTGGAGTTGGGCAGAAG  650

seq1  AGAGGTAGGCAGGGTCTAAGTTCCCAGGCTTGTGGTCAGAGACCACAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGGCAGGGTCTAAGTTCCCAGGCTTGTGGTCAGAGACCACAAAG  700

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  750

seq1  GAGAGAGAGAGAGACCAT-GGGTAGGTGAATTATGAGAATGTGGCCATGA  799
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGACCATGGGGTAGGTGAATTATGAGAATGTGGCCATGA  800

seq1  AGGCTGGCCAGTTGGAATAAGAGTGGCCCAGAGG-AACAAGGAAACATAT  848
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGCTGGCCAGTTGGAATAAGAGTGGCCCAGAGGAAACAAGGAAACATAT  850

seq1  CATGGAGTTATTGACAGAGAAGAAGACAAAATAGTTTAGAGGGCTGATAT  898
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATGGAGTTATTGACAGAGAAG-AGACAAAATAGTTTAGAGGGCTGATAT  899

seq1  CTGTCCAGCTCTAGTACTTTTTAGGCTAATTACAAATATAAAGGTTTTTT  948
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTGTCCAGCTCTAGTACTTTTTAGGCTAATTACAAATATAAAGG-TTTTT  948

seq1  ATGTCATTTATTTGGGAGCCAAATGATCAAAGGTTGGATAGACACCCCCA  998
      |||||||||||||||||||||||||||||||||||||| |||   |||||
seq2  ATGTCATTTATTTGGGAGCCAAATGATCAAAGGTTGGAAAGAACACCCCA  998

seq1  TTTAATTTTCACTATATTTATTTTTCCATTGTCTATGAGATATATTTTAA  1048
      |||||||||||||||| |||||||| || |||||||||||||||||||||
seq2  TTTAATTTTCACTATA-TTATTTTTTCAGTGTCTATGAGATATATTTTAA  1047

seq1  ATTGTTAGCATACTTCACTAGGCAACTTGTAATATGGCTCTTAACAGCTT  1098
      ||||||||||||| ||||||||||||||| |||   ||||||||||||||
seq2  ATTGTTAGCATAC-TCACTAGGCAACTTGAAAT---GCTCTTAACAGCTT  1093

seq1  TTTATACTTTGCTA  1112
      ||||||||||||||
seq2  TTTATACTTTGCTA  1107