BAC Information

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BAC

Clone NameB6Ng01-155D11
Chromosome6 (Build37)
Map Location 34,601,574 - 34,763,213
singlet/doubletdoublet
Overlap geneLOC100039184, Cald1, Agbl3
Upstream geneExoc4, Lrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm
Downstream geneTmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D11.bB6Ng01-155D11.g
ACCDH950060DH950061
length1,158884
definitionDH950060|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D11, 5' end.DH950061|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,762,028 - 34,763,213)(34,601,574 - 34,602,456)
sequence
gaattcccgttttttaaaaacccgtaagaacaaaaagaacaactatttgt
tgtacatcccagaacattcttttataaacaaagggacatgatgacatgag
ataccccacaagagaagtttattcatcttgcttataggactgatcaaatg
taagtgtgcaagcacatgctcactactgaactgtcctatcattaatctta
cagcaaagcctagctttgattcactgttccagaagaagtcattaaggaca
tttacccagagtagatccgcagaaggtggcctccagcgtgaagctgttcc
tgatgcccatcttccacattacaacccttcctgtcccctctttgcttttc
tgaacgttaaacttgcaagctgagaaggaaaactgagaagcagtggttaa
aaatgacacatgtactttttgggaagagtgtaaggaggaacaagtaggta
gtctccttcccttcattattgttactcgcaaataccagggtcagcttctt
tttctttgattttattgttacatacagatacatattaacaaatagagggg
ggacatggatggggttcaagggagagtagctgggagcgactggagggaaa
aaggaggggtaaaagtgatataattatattcccattaagtggacaaaaaa
agaacaaaaattaaatggaatctccacaaatattgtaattctcaaagctg
aaggtgctatgttttatttcctgatcaattaaaaataactgtttttattt
tattgtttgagacaggatttccggtggcctagggtgacctctaattccct
gtgtggctcagactctacttccaagctgggaaataactcattttaaggat
gatgtatttatatttcaggaatagaaattgtaaccccaataataaatata
cttttatcatcatagaacatgtcccaaataaacttattaagtttgctact
attagttcagatgatatattttaggaacagtcttgtttcgttgcttgctt
ttttttttttgagacagtgtctgtatatagccagatagcctcatactccg
catcatccctggtggattacagatgtgtgtcactgccaacagaatttgaa
tttagatgttctagattctggcatgttcgtgaagatcatatgtgatttcg
aaatgaat
gaattccactggctgttcccagggccctgtgtacaaaatggccccctgtg
ccttgttatttttctgtggtcgctgatgtctacagcttcctatacgaggg
caaatgcagatctgggtgacagtgaatgagcagtaagtgtgtccataact
agttttctagtgcaaagggcgtgtgtctcatctatgggattgtgccctcc
acccagggctgctccttggcatatacatagaatcttacctccacattcct
gccttgatttcttgccctgatttacagtactcttcaactgtaaatgcaaa
cagcacagggctgccaatctttcggctaaggagagtgacatgctcaaact
ttcccagggctccacacggctgacttcagctggtgttctaggacaatgtg
atactagcgtctgacctaaaccttgagtctcatagaccagatggtttatg
tccacgtgttgtgtttaaaatggactcactggacaccttagcctaaggct
ctgtggcgcatggcaaagttgggaagcacctaccatcttgttggagtgga
acaagattattctactctggctgttccttgccttggcttttggcttactt
taagaaactggaaataaaagaaatcatgacctatagctctgtccccaggt
attgaaaatgtaacccataagtcaaaactattactagaaaaagaattaag
actttgttttgtgggttagagaaatggttccatggctaagagtatttgct
gctcttgtgatgggcccaggtttggttcccagcacctacatgatgcctcc
taactatctgtaaccccagttccaaggaatccaacactctcttctggcct
gtgtggggtgctacatgcatgtggggtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_34762028_34763213
seq2: B6Ng01-155D11.b_44_1201 (reverse)

seq1  ATTCTATTTCTGGAAATCTACCATATGAATCTTCATCTGAAACATG-CAG  49
      |||| |||||  ||||||   |||||| |||||||     |||||| |||
seq2  ATTC-ATTTC--GAAATC--ACATATG-ATCTTCA---CGAACATGCCAG  41

seq1  AATTTCTAGAACATACTAAAAATTCAAGATTCTGTGTGCAGTGACACACA  99
      ||  |||||||||| ||  |||||||| |||||||  |||||||||||||
seq2  AA--TCTAGAACAT-CT--AAATTCAA-ATTCTGTTGGCAGTGACACACA  85

seq1  TCTGTAATCTCACCAGGGATGATTGCCGTGAGTATGAGGCTATCCTGGGC  149
      ||||||||| |||||||||||| |||   |||||||||||||||   |||
seq2  TCTGTAATC-CACCAGGGATGA-TGC--GGAGTATGAGGCTATC--TGGC  129

seq1  TATATAACAAGACACTGTCTCAAAAAAGAAAAAAGCAAGCAACGAAACAA  199
      ||||||   |||||||||||||||||| ||||||||||||||||||||||
seq2  TATATA--CAGACACTGTCTCAAAAAA-AAAAAAGCAAGCAACGAAACAA  176

seq1  GAACTGTTCCTAAAATTATATCATCCTGAACTAATAGTAGCAAAACTTAA  249
      | ||||||||||||| |||||||| |||||||||||||||| ||||||||
seq2  G-ACTGTTCCTAAAA-TATATCAT-CTGAACTAATAGTAGC-AAACTTAA  222

seq1  TAAGTTTATTTGGGACATGTTCTATGATGATAAAAGTATATTTATTATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTATTTGGGACATGTTCTATGATGATAAAAGTATATTTATTATTG  272

seq1  GGGTTACAATTTCTATTTCCTGAAATATAAATACATCATCCTTAAAATGA  349
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGGTTACAATTTCTA-TTCCTGAAATATAAATACATCATCCTTAAAATGA  321

seq1  GTTATTTCCCAGCTTGGAAGTAGAGTCTGAGCCACACAGGGAATTAGAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTCCCAGCTTGGAAGTAGAGTCTGAGCCACACAGGGAATTAGAGG  371

seq1  TCACCCTAGGCCACCGGAAATCCTGTCTCAAACAATAAAATAAAAACAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTAGGCCACCGGAAATCCTGTCTCAAACAATAAAATAAAAACAGT  421

seq1  TATTTTTAATTGATCAGGAAATAAAACATAGCACCTTCAGCTTTGAGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAATTGATCAGGAAATAAAACATAGCACCTTCAGCTTTGAGAAT  471

seq1  TACAATATTTGTGGAGATTCCATTTAATTTTTGTTCTTTTTTTGTCCACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATTTGTGGAGATTCCATTTAATTTTTGTTCTTTTTTTGTCCACT  521

seq1  TAATGGGAATATAATTATATCACTTTTACCCCTCCTTTTTCCCTCCAGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGGAATATAATTATATCACTTTTACCCCTCCTTTTTCCCTCCAGTC  571

seq1  GCTCCCAGCTACTCTCCCTTGAACCCCATCCATGTCCCCCCTCTATTTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGCTACTCTCCCTTGAACCCCATCCATGTCCCCCCTCTATTTGT  621

seq1  TAATATGTATCTGTATGTAACAATAAAATCAAAGAAAAAGAAGCTGACCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGTATCTGTATGTAACAATAAAATCAAAGAAAAAGAAGCTGACCC  671

seq1  TGGTATTTGCGAGTAACAATAATGAAGGGAAGGAGACTACCTACTTGTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTGCGAGTAACAATAATGAAGGGAAGGAGACTACCTACTTGTTC  721

seq1  CTCCTTACACTCTTCCCAAAAAGTACATGTGTCATTTTTAACCACTGCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTACACTCTTCCCAAAAAGTACATGTGTCATTTTTAACCACTGCTT  771

seq1  CTCAGTTTTCCTTCTCAGCTTGCAAGTTTAACGTTCAGAAAAGCAAAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTTCCTTCTCAGCTTGCAAGTTTAACGTTCAGAAAAGCAAAGAG  821

seq1  GGGACAGGAAGGGTTGTAATGTGGAAGATGGGCATCAGGAACAGCTTCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGGAAGGGTTGTAATGTGGAAGATGGGCATCAGGAACAGCTTCAC  871

seq1  GCTGGAGGCCACCTTCTGCGGATCTACTCTGGGTAAATGTCCTTAATGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGCCACCTTCTGCGGATCTACTCTGGGTAAATGTCCTTAATGAC  921

seq1  TTCTTCTGGAACAGTGAATCAAAGCTAGGCTTTGCTGTAAGATTAATGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGGAACAGTGAATCAAAGCTAGGCTTTGCTGTAAGATTAATGAT  971

seq1  AGGACAGTTCAGTAGTGAGCATGTGCTTGCACACTTACATTTGATCAGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTTCAGTAGTGAGCATGTGCTTGCACACTTACATTTGATCAGTC  1021

seq1  CTATAAGCAAGATGAATAAACTTCTCTTGTGGGGTATCTCATGTCATCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGCAAGATGAATAAACTTCTCTTGTGGGGTATCTCATGTCATCAT  1071

seq1  GTCCCTTTGTTTATAAAAGAATGTTCTGGGATGTACAACAAATAGTTGTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTGTTTATAAAAGAATGTTCTGGGATGTACAACAAATAGTTGTT  1121

seq1  CTTTTTGTTCTTACGGGTTTTTAAAAAACGGGAATTC  1186
      |||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTCTTACGGGTTTTTAAAAAACGGGAATTC  1158

seq1: chr6_34601574_34602456
seq2: B6Ng01-155D11.g_69_952

seq1  GAATTCCACTGGCTGTTCCCAGGGCCCTGTGTACAAAATGGCCCCCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGGCTGTTCCCAGGGCCCTGTGTACAAAATGGCCCCCTGTG  50

seq1  CCTTGTTATTTTTCTGTGGTCGCTGATGTCTACAGCTTCCTATACGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTATTTTTCTGTGGTCGCTGATGTCTACAGCTTCCTATACGAGGG  100

seq1  CAAATGCAGATCTGGGTGACAGTGAATGAGCAGTAAGTGTGTCCATAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCAGATCTGGGTGACAGTGAATGAGCAGTAAGTGTGTCCATAACT  150

seq1  AGTTTTCTAGTGCAAAGGGCGTGTGTCTCATCTATGGGATTGTGCCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTAGTGCAAAGGGCGTGTGTCTCATCTATGGGATTGTGCCCTCC  200

seq1  ACCCAGGGCTGCTCCTTGGCATATACATAGAATCTTACCTCCACATTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGGCTGCTCCTTGGCATATACATAGAATCTTACCTCCACATTCCT  250

seq1  GCCTTGATTTCTTGCCCTGATTTACAGTACTCTTCAACTGTAAATGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGATTTCTTGCCCTGATTTACAGTACTCTTCAACTGTAAATGCAAA  300

seq1  CAGCACAGGGCTGCCAATCTTTCGGCTAAGGAGAGTGACATGCTCAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGGGCTGCCAATCTTTCGGCTAAGGAGAGTGACATGCTCAAACT  350

seq1  TTCCCAGGGCTCCACACGGCTGACTTCAGCTGGTGTTCTAGGACAATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGGCTCCACACGGCTGACTTCAGCTGGTGTTCTAGGACAATGTG  400

seq1  ATACTAGCGTCTGACCTAAACCTTGAGTCTCATAGACCAGATGGTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGCGTCTGACCTAAACCTTGAGTCTCATAGACCAGATGGTTTATG  450

seq1  TCCACGTGTTGTGTTTAAAATGGACTCACTGGACACCTTAGCCTAAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGTGTTGTGTTTAAAATGGACTCACTGGACACCTTAGCCTAAGGCT  500

seq1  CTGTGGCGCATGGCAAAGTTGGGAAGCACCTACCATCTTGTTGGAGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCGCATGGCAAAGTTGGGAAGCACCTACCATCTTGTTGGAGTGGA  550

seq1  ACAAGATTATTCTACTCTGGCTGTTCCTTGCCTTGGCTTTTGGCTTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTATTCTACTCTGGCTGTTCCTTGCCTTGGCTTTTGGCTTACTT  600

seq1  TAAGAAACTGGAAATAAAAGAAATCATGACCTATAGCTCTGTCCCCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACTGGAAATAAAAGAAATCATGACCTATAGCTCTGTCCCCAGGT  650

seq1  ATTGAAAATGTAACCCATAAGTCAAAACTATTACTAGAAAAAGAATTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATGTAACCCATAAGTCAAAACTATTACTAGAAAAAGAATTAAG  700

seq1  ACTTTGTTTTGTGGGTTAGAGAAATGGTTCCATGGCTAAGAGTATTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTTTGTGGGTTAGAGAAATGGTTCCATGGCTAAGAGTATTTGCT  750

seq1  GCTCTTGTGATGGGCCCAGGTTTGGTTCCCAGCACCTACATGATGCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGTGATGGGCCCAGGTTTGGTTCCCAGCACCTACATGATGCCTCC  800

seq1  TAACTATCTGTAACCCCAGTTCCAAGGAATCCAACACTCTCTTCTGGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATCTGTAACCCCAGTTCCAAGGAATCCAACACTCTCTTCTGGCCT  850

seq1  GTGT-GGGTGCTACATGCATGTGGGGTGTGTGTG  883
      |||| |||||||||||||||||||||||||||||
seq2  GTGTGGGGTGCTACATGCATGTGGGGTGTGTGTG  884