BAC Information

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BAC

Clone NameB6Ng01-155G13
Chromosome6 (Build37)8 (Build37)
Map Location 18,835,442 - 18,835,96867,626,003 - 67,627,167
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155G13.bB6Ng01-155G13.g
ACCDH950199DH950200
length9941,157
definitionDH950199|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G13, 5' end.DH950200|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(67,626,003 - 67,627,167)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagagtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaagagataagtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaatatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaaggattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccagatattttatattatt
tgtgactattgagaaggtgttgtttccctaatttctttctcagc
gaattcttaatgtatgaaaagctttcaattctagctaaagaaccctaaga
taatttaagtttcctcttaatctgagttggtgacacatgacctgcagctt
ctggcttccttgctcacctggtgttctaagcgtcatgggtgaagtaacaa
agactctacctggcagttcccacagctcccctggaagggagtgtctgaca
tggggatgtgggtggcttctgtttgtcgggaggctgtgcacacacctttg
atggaggatcattacttatctagaatatccttataattccctcctgggcc
acttacaatttatcacttcctcctgctcgttagacaagacagctttcaaa
ggtaggtggatgacaatataacccaggcaggaaatggctcctacctgcta
cccagtgggttagtagtctctgaaggagacacctgccatgactctggtct
ctcctaaactgatgctgtagctttgcagcatgaggttcagaaaaccaagg
gtagaaacagatggaaatggttctttatgactcaagaaagtccacagtgc
tctgcacagcaccaacaatggagagctacaaacctatccatgcacagatg
ctttgcatgatgcgcagggccccgtgctgcactgggtgaatactccttca
cttgcttacatcccacctccagacctatctgcatttgactccggcattca
tgacatgatttcttctgtcaagcacatatgctcatgctcctgatatttta
tttgagtttagaatatgtcgttcatgagcatattgtttgtgaatgctgta
gatgggtcatcaaatgtacattgatggtgagcattcaatgcttatctgta
tagatttgtactgttctgagttaatatgatctgtgtgacactgtttactg
gagggtgtttattgctaactcagatatatcttcttaaactttatttatta
ttatatcattatattttttagagacatggttctcttgtgtggccttggct
gttctgaaacttgctgtgtagatcatgttggccttaaactcacaaaattc
atcaggctctgcctcttgagtggctgggataaggccaagtaccaattatt
ccgtcttcttattttaaaggctatattggtttttttttatagaaggagtt
ttcctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-155G13.b_50_577 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATATTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGTGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      |  |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CTTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr8_67626003_67627167
seq2: B6Ng01-155G13.g_66_1222

seq1  GAATTCTTAATGTATGAAAAGCTTTCAATTCTAGCTAAAGAACCCTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGTATGAAAAGCTTTCAATTCTAGCTAAAGAACCCTAAGA  50

seq1  TAATTTAAGTTTCCTCTTAATCTGAGTTGGTGACACATGACCTGCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAGTTTCCTCTTAATCTGAGTTGGTGACACATGACCTGCAGCTT  100

seq1  CTGGCTTCCTTGCTCACCTGGTGTTCTAAGCGTCATGGGTGAAGTAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCCTTGCTCACCTGGTGTTCTAAGCGTCATGGGTGAAGTAACAA  150

seq1  AGACTCTACCTGGCAGTTCCCACAGCTCCCCTGGAAGGGAGTGTCTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTACCTGGCAGTTCCCACAGCTCCCCTGGAAGGGAGTGTCTGACA  200

seq1  TGGGGATGTGGGTGGCTTCTGTTTGTCGGGAGGCTGTGCACACACCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATGTGGGTGGCTTCTGTTTGTCGGGAGGCTGTGCACACACCTTTG  250

seq1  ATGGAGGATCATTACTTATCTAGAATATCCTTATAATTCCCTCCTGGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGATCATTACTTATCTAGAATATCCTTATAATTCCCTCCTGGGCC  300

seq1  ACTTACAATTTATCACTTCCTCCTGCTCGTTAGACAAGACAGCTTTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAATTTATCACTTCCTCCTGCTCGTTAGACAAGACAGCTTTCAAA  350

seq1  GGTAGGTGGATGACAATATAACCCAGGCAGGAAATGGCTCCTACCTGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGTGGATGACAATATAACCCAGGCAGGAAATGGCTCCTACCTGCTA  400

seq1  CCCAGTGGGTTAGTAGTCTCTGAAGGAGACACCTGCCATGACTCTGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGGGTTAGTAGTCTCTGAAGGAGACACCTGCCATGACTCTGGTCT  450

seq1  CTCCTAAACTGATGCTGTAGCTTTGCAGCATGAGGTTCAGAAAACCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAAACTGATGCTGTAGCTTTGCAGCATGAGGTTCAGAAAACCAAGG  500

seq1  GTAGAAACAGATGGAAATGGTTCTTTATGACTCAAGAAAGTCCACAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACAGATGGAAATGGTTCTTTATGACTCAAGAAAGTCCACAGTGC  550

seq1  TCTGCACAGCACCAACAATGGAGAGCTACAAACCTATCCATGCACAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAGCACCAACAATGGAGAGCTACAAACCTATCCATGCACAGATG  600

seq1  CTTTGCATGATGCGCAGGGCCCCGTGCTGCACTGGGTGAATACTCCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCATGATGCGCAGGGCCCCGTGCTGCACTGGGTGAATACTCCTTCA  650

seq1  CTTGCTTACATCCCACCTCCAGACCTATCTGCATTTGACTCCGGCATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTACATCCCACCTCCAGACCTATCTGCATTTGACTCCGGCATTCA  700

seq1  TGACATGATTTCTTCTGTCAAGCACATATGCTCATGCTCCTGATATTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGATTTCTTCTGTCAAGCACATATGCTCATGCTCCTGATATTTTA  750

seq1  TTTGAGTTTAGAATATGTCGTTCATGAGCATATTGTTTGTGAATGCTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTTAGAATATGTCGTTCATGAGCATATTGTTTGTGAATGCTGTA  800

seq1  GATGGGTCATCAAATGTACATTGATGGTGAGCATTCAATGCTTATCTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTCATCAAATGTACATTGATGGTGAGCATTCAATGCTTATCTGTA  850

seq1  TAGATTTGTACTGTTCTGAGTTAATATGATCTGTGTGACACTGTTTACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGTACTGTTCTGAGTTAATATGATCTGTGTGACACTGTTTACTG  900

seq1  GAGGGTGTTTATTGCTAACTCAGATAATATCTTCTTAAAACTTTATTTAT  950
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  GAGGGTGTTTATTGCTAACTCAGAT-ATATCTTCTT-AAACTTTATTTAT  948

seq1  TATTATTATCATTATATTTTTTAGAGACATGGTTTCTC-TGTGTGGCCTT  999
      ||||| |||||||||||||||||||||||||| ||||| |||||||||||
seq2  TATTA-TATCATTATATTTTTTAGAGACATGG-TTCTCTTGTGTGGCCTT  996

seq1  GGCTGTTCTGAAACTTGCTGTGTAGATCATGTTGGCCTTAAACTCAC-AA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGCTGTTCTGAAACTTGCTGTGTAGATCATGTTGGCCTTAAACTCACAAA  1046

seq1  ATTCATCAGGCTCTGCCTCTTGAGT-GCTGGGATTAAAGGCAAGTACCAA  1097
      ||||||||||||||||||||||||| ||||||| ||| | ||||||||||
seq2  ATTCATCAGGCTCTGCCTCTTGAGTGGCTGGGA-TAAGGCCAAGTACCAA  1095

seq1  TATATCCAGTTCTTCTTATTTTTAAAGGCT-TATTTGTTTTTATTTTATA  1146
      | ||| | | |||||||| ||||||||||| |||| |||||| |||||||
seq2  T-TATTCCG-TCTTCTTA-TTTTAAAGGCTATATTGGTTTTT-TTTTATA  1141

seq1  TGTATGAGTGTTTTCCTGC  1165
       | | ||  ||||||||||
seq2  -GAAGGA--GTTTTCCTGC  1157