BAC Information

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BAC

Clone NameB6Ng01-155M18
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,452 - 18,835,968160,786,091 - 160,787,267
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M18.bB6Ng01-155M18.g
ACCDH950479DH950480
length9951,155
definitionDH950479|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M18, 5' end.DH950480|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(160,786,091 - 160,787,267)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcctttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcataagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttttgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tctccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaaagtttttatcat
acagatctttcacttccttagttagagtcacgccagatattttatatatt
gtgactatgagaaagtgttgtttccctaattcttttctcagcctg
gaattcaatttattgctgacaacaataaaatttggagaggaacgtcttaa
aagtttctaggtagtgtataaagacacggaacaaaaaagttgccctcttt
taccattcgagtaggtgatcaaatcaaagtagttagcagctttaattata
attatacccatcattagaagagtacttattgctactttttgccagaaata
aggaaggtctgagacataggcaagaaggatgatccagaagacgaccccaa
gaagaacaaggccacacaatgtaattttcaccagatccaacaaggcacca
ttttaaaaatgaaataatatggttttgggcatagtacataaaaggtcagc
taagggtcaatgttaagttagaagaaaatctgatttttttacataggata
aaagggttttggtgcttcacttaatcaagtcagcttggttttttgtttta
tttttcatttctttttttttcatcttttattagatattttcttcatttac
atttcaaatgctatcctgaaagtcccctataccctcccctccccccaccc
tgctcccctacccacccactcccacttcttggccctggcattcccctgta
ctggggcatataaagtttgcaagaccaaggggcctctcttcccaatgatg
gccggctaggccatcttctgctacatatgcagctagagacatgagctctc
ggggtactggttagttcatattgttgttccacctatagggttgcaaaccc
cttcagctccttggatactttctctagcactatctgaaaaagtaatgaaa
ggatatctccacccagagttctgttattcatcactatcagactagagagc
cttcagggtagaggcttcaatgagaatcatcacgttgtaaaaagctgaat
agatctcaagagggttccaactttgccccattttattcaagacagaaatg
tgtttcactttcaagctctcatggagagatccatcaacagaccatttact
atctcaaatttgtcaacttcaacaaacaccggaaaaataaggataaccca
ccaaagtatcagtggacatgaatcttctgctctataagcttcgctatcaa
ttctaagaccataaatgtatctatatgaacaaaacattgccttggtgata
acctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-155M18.b_50_567 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCAAAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||| ||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATTGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| | |||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTATGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | |||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAGGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr1_160786091_160787267
seq2: B6Ng01-155M18.g_67_1221

seq1  GAATTCAATTTATTGCTGACAACAATAAAATTTGGAGAGGAACGTCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTATTGCTGACAACAATAAAATTTGGAGAGGAACGTCTTAA  50

seq1  AAGTTTCTAGGTAGTGTATAAAGACACGGAACAAAAAAGTTGCCCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTAGGTAGTGTATAAAGACACGGAACAAAAAAGTTGCCCTCTTT  100

seq1  TACCATTCGAGTAGGTGATCAAATCAAAGTAGTTAGCAGCTTTAATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTCGAGTAGGTGATCAAATCAAAGTAGTTAGCAGCTTTAATTATA  150

seq1  ATTATACCCATCATTAGAAGAGTACTTATTGCTACTTTTTGCCAGAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACCCATCATTAGAAGAGTACTTATTGCTACTTTTTGCCAGAAATA  200

seq1  AGGAAGGTCTGAGACATAGGCAAGAAGGATGATCCAGAAGACGACCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTCTGAGACATAGGCAAGAAGGATGATCCAGAAGACGACCCCAA  250

seq1  GAAGAACAAGGCCACACAATGTAATTTTCACCAGATCCAACAAGGCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACAAGGCCACACAATGTAATTTTCACCAGATCCAACAAGGCACCA  300

seq1  TTTTAAAAATGAAATAATATGGTTTTGGGCATAGTACATAAAAGGTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATGAAATAATATGGTTTTGGGCATAGTACATAAAAGGTCAGC  350

seq1  TAAGGGTCAATGTTAAGTTAGAAGAAAATCTGATTTTTTTACATAGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTCAATGTTAAGTTAGAAGAAAATCTGATTTTTTTACATAGGATA  400

seq1  AAAGGGTTTTGGTGCTTCACTTAATCAAGTCAGCTTGGTTTTTTGTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTTTGGTGCTTCACTTAATCAAGTCAGCTTGGTTTTTTGTTTTA  450

seq1  TTTTTCATTTCTTTTTTTTTCATCTTTTATTAGATATTTTCTTCATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTTCTTTTTTTTTCATCTTTTATTAGATATTTTCTTCATTTAC  500

seq1  ATTTCAAATGCTATCCTGAAAGTCCCCTATACCCTCCCCTCCCCCCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATGCTATCCTGAAAGTCCCCTATACCCTCCCCTCCCCCCACCC  550

seq1  TGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTA  600

seq1  CTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCAATGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCAATGATG  650

seq1  GCCGGCTAGGCCATCTTCTGCTACATATGCAGCTAGAGACATGAGCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCTAGGCCATCTTCTGCTACATATGCAGCTAGAGACATGAGCTCTC  700

seq1  GGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAAACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAAACCC  750

seq1  CTTCAGCTCCTTGGATACTTTCTCTAGCACTATCTGAAAAAGTAATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTCCTTGGATACTTTCTCTAGCACTATCTGAAAAAGTAATGAAA  800

seq1  GGATATCTCCACCCAGAGTTCTGTTATTCATCACTATCAGACTAGAGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCTCCACCCAGAGTTCTGTTATTCATCACTATCAGACTAGAGAGC  850

seq1  CTTCAGGGTAGAGGCTTCAATGAGAATCATCACGTTGTAAAAAGCTGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGGTAGAGGCTTCAATGAGAATCATCACGTTGTAAAAAGCTGAAT  900

seq1  AGATCTCAAGAGGGTTTCCAACTTTGCCCCATTTTATTCAAGACAGAAAT  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGATCTCAAGAGGG-TTCCAACTTTGCCCCATTTTATTCAAGACAGAAAT  949

seq1  GTGTTTCACTTTCAAGCTCTCATGGAAGAGAATCCAATCAACAAGACCAT  1000
      ||||||||||||||||||||||||| |||| |||| |||||| |||||||
seq2  GTGTTTCACTTTCAAGCTCTCATGG-AGAG-ATCC-ATCAAC-AGACCAT  995

seq1  TTACTATCTCAATATTTTGTCAAACTTCAAACAAACACACGGAAAATACA  1050
      |||||||||||  | |||||| |||||| ||||||||| |||||||   |
seq2  TTACTATCTCA--AATTTGTC-AACTTC-AACAAACAC-CGGAAAAATAA  1040

seq1  GGAATACCCAACACAAAGTATTCATGTGACATGAATCTTCCTGGCTCCAT  1100
      |||  |||||   ||||||| |||   |||||||||||||   |||| ||
seq2  GGATAACCCA--CCAAAGTA-TCAGTGGACATGAATCTTC--TGCTCTAT  1085

seq1  TAGCTACAGCCTACCAATTCCCAAAGACACTAAATG-ATCTTAATGAAAC  1149
       |||| |   ||| |||||  | |||||  |||||| ||||  |||||  
seq2  AAGCTTC--GCTATCAATT--CTAAGACCATAAATGTATCTATATGAA--  1129

seq1  AAAAACATTGGGCTTGTGGTGAT-ACCTG  1177
       ||||||||  || | ||||||| |||||
seq2  CAAAACATT--GCCT-TGGTGATAACCTG  1155