BAC Information

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BAC

Clone NameB6Ng01-155O08
Chromosome6 (Build37)
Map Location 58,354,791 - 58,355,413
singlet/doubletsinglet
Overlap genenone
Upstream geneV1rc27, EG434017, LOC666822, Ppm1k, Herc5, Pigy, Lancl2, AW146242, V1rc28, LOC626582, V1rc23, V1rc24, LOC100041514, V1rc18, V1rc8, V1rc17, EG633683, LOC626649, LOC626659, LOC626672, LOC666893, LOC100041571, V1rc33, LOC626724, V1rc25, V1rc2
Downstream geneLOC666928, V1rc22, LOC626817, EG626828, LOC666954, Abcg2, Herc3, Nap1l5, D430015B01Rik, Tigd2, Gprin3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155O08.bB6Ng01-155O08.g
ACCDH950546DH950547
length1,0241,159
definitionDH950546|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O08, 5' end.DH950547|Mus musculus domesticus DNA, BAC clone: B6Ng01-155O08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcagttcattgtacaccataagttgatatttacacgtgaaca
ctctttctccatttcaactcatgtcataaatgttcccttgattaattact
caaaaggacagtattacttatagtgatttttaaagcatttctcttgaaaa
tatgttaatttgctctaaattaacaagaataatattaaaatactactgta
gatttaattctgtttcctagttattattatttttatattcttacatagta
cttcccaagtttcccattcctgcactctttccaacccctcctcaccattt
gttctctgccaaatacccattttcccctgaaaaaaataaaagagcaggcc
taaggatatcaactgaacatggcatagaaagtgtcagtaagactaggtac
aaaccctcttattaagaggtagatgaagcaacccagtgaaagaaaaataa
agccacaagcataggcaaaagtgtcagaaacatgcccacctctactctta
ggaatcccttaagaacacccaaactgcacagctatcatgtgtgtgcagag
gacctagcacagacccatatagggtccttgttttttgcttcaatctttgt
gatcccttgtggtccctgcatagttgatgctgtgagccctgttctcctgg
tagcctctacccctctgcctcctataatcctttctccattttctaagctg
tgggtttctctggctctgcctagtctttgcctatcaatctctgcatctgc
tctcatcagttgccagacggtgcttctctggtgacaattgggatagacac
taatatctgagtattgaaaaatatcactagggattatttcattgatattt
tccagtttgtgtttggttctgttctggacctatgggctgtcctgtctctg
tctccaagtgatgcagcagcgtgggctccctccagggttatggggctaaa
gttgtaccagacactggttagctactccacaggttcaaatcttcattacc
tcagacatttttcagcaggcagat
gaattctgttcttgaggctgtcttcttttaggtttgttgaaggattactt
tcttgcttcttctaggacatagtttccatacttgtgttggtgttttccct
ttattaccctttgaaggcctggattcgtggaaagatattgtgtgaatttg
gttttgccatagaatactttggtttctccatctatggtaattgagagttt
tgctgggtattgtagcctgggctggcatatatgttctcttagggtctgta
taacatctattcaagattgtctggctttcatagtctctgctgagaagtct
ggtgcaatctaaaaggtctgcctttatatgttacttgaccttttcccctt
actacttttaatattctatttttatttagtgcatttatttttctgattat
tatgtgtcaggaggaatttcttttctgttccattctatttggagttctgt
aggcttattgtatgttcatggttatctctttaggttagggaagttgtctt
ctataattttgttgaagatatttgctgtccctttaagttgaaattcttcg
ttcatctactcctattatctgtaggtttggtcttttcactgtgtcctggg
tttcctggatgttttgagttaggatcttttagcattttgtgttttctttg
attattgtgtctgtgttctctatggaattttctgcatctgagattctctc
ttccatctcttgtattctgttgctgatgctcacatctattgttcctgatt
tctttcctagggtttctatctccagagttgtctccctttgggttttcttt
attgtttcttccttttttagatcttggattgttttgttcaattccacacc
tatttgtttgtgtttcctgtaattctttaaggtttttatgtttcttcttt
aaaggcttctacctgtttagcagtgctgtcttgtaattctttaagagatt
tgtgcttcatctttaggccttctgtttagcagtattcttctgtatttatt
taagtgagttatatttactcgtaaacctcctctaccagcatcataagata
tgattttttttactcgaaatctggctttgggggttaagggtatgtaggaa
tcatgtgggaagatttggtcgataaaatcgagatggacttgttctcggtg
agatatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_58354791_58355413
seq2: B6Ng01-155O08.b_49_671 (reverse)

seq1  CTATGCAGGGACCACAAGGGATCACAAAGATTGAAGCAAAAAACAAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCAGGGACCACAAGGGATCACAAAGATTGAAGCAAAAAACAAGGAC  50

seq1  CCTATATGGGTCTGTGCTAGGTCCTCTGCACACACATGATAGCTGTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATGGGTCTGTGCTAGGTCCTCTGCACACACATGATAGCTGTGCAG  100

seq1  TTTGGGTGTTCTTAAGGGATTCCTAAGAGTAGAGGTGGGCATGTTTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTGTTCTTAAGGGATTCCTAAGAGTAGAGGTGGGCATGTTTCTGA  150

seq1  CACTTTTGCCTATGCTTGTGGCTTTATTTTTCTTTCACTGGGTTGCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTGCCTATGCTTGTGGCTTTATTTTTCTTTCACTGGGTTGCTTCA  200

seq1  TCTACCTCTTAATAAGAGGGTTTGTACCTAGTCTTACTGACACTTTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCTTAATAAGAGGGTTTGTACCTAGTCTTACTGACACTTTCTAT  250

seq1  GCCATGTTCAGTTGATATCCTTAGGCCTGCTCTTTTATTTTTTTCAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTTCAGTTGATATCCTTAGGCCTGCTCTTTTATTTTTTTCAGGGG  300

seq1  AAAATGGGTATTTGGCAGAGAACAAATGGTGAGGAGGGGTTGGAAAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGGTATTTGGCAGAGAACAAATGGTGAGGAGGGGTTGGAAAGAGT  350

seq1  GCAGGAATGGGAAACTTGGGAAGTACTATGTAAGAATATAAAAATAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATGGGAAACTTGGGAAGTACTATGTAAGAATATAAAAATAATAA  400

seq1  TAACTAGGAAACAGAATTAAATCTACAGTAGTATTTTAATATTATTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGGAAACAGAATTAAATCTACAGTAGTATTTTAATATTATTCTTG  450

seq1  TTAATTTAGAGCAAATTAACATATTTTCAAGAGAAATGCTTTAAAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAGAGCAAATTAACATATTTTCAAGAGAAATGCTTTAAAAATCA  500

seq1  CTATAAGTAATACTGTCCTTTTGAGTAATTAATCAAGGGAACATTTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGTAATACTGTCCTTTTGAGTAATTAATCAAGGGAACATTTATGA  550

seq1  CATGAGTTGAAATGGAGAAAGAGTGTTCACGTGTAAATATCAACTTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTTGAAATGGAGAAAGAGTGTTCACGTGTAAATATCAACTTATGG  600

seq1  TGTACAATGAACTGAAAGAATTC  623
      |||||||||||||||||||||||
seq2  TGTACAATGAACTGAAAGAATTC  623