BAC Information

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BAC

Clone NameB6Ng01-157A14
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,442 - 18,835,968189,076,154 - 189,077,268
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157A14.bB6Ng01-157A14.g
ACCDH951378DH951379
length9901,108
definitionDH951378|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A14, 5' end.DH951379|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(189,076,154 - 189,077,268)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttatcatac
agatctttcacttccttcgttagagtcacgccgagatatttatattattt
gtggctattgagaaggtgtgtttccctaatttcttctcag
gaattcactcggacaattcttctacggcaaagctttattgcttcatctga
aggaagaccccgaacaaggaaaatggtgctgcttatatacccctccgtgt
gacgtgtccgctcctgattagctgctcactcatcaccccactactacgcc
ctgggatgggcagtgacttggcactaggtgcatttactcttgcacctgcg
cacatcacttgtttaccagttaggcacagcggaggctcatgatggtgatt
gctcacggctctccacagggtactgtttttctacttgtggaaatgtaact
ctggcttatcttggttagaatctgctttgaacaattcttgaatttttaac
aagaaataataatagactttagtttggccacataaacaccaaagatcaaa
aagccccgtgtttttcttatattcaacagtgaaatgaatacctctatagt
tattgtatgaaaagctggttatcaactgacctatattataaattttatat
atacatatacatacatacatacatacatacatacatacatacatacattc
atacatacttatggctgctttcacatgctcaggatcactgtacattctca
gcatatgtttcatctcactgagagatgataacatctctattatatgcact
gagagatgataacatctctattatatgcactgagagatgataacatctct
attatatggggctttaagccctgggtcggagcatagctcagccctccacc
actgctttagaggaagaaaaatatagttgcaaagtaccatcaaggtagtt
ttggtaagagatctctgctggtcctttatcagaccaagagccactatttt
accattcgcaaatctcagctttttttgtggttatttccacaagattatca
tctagatatgacttgacacacattcccaccactacctcctctctcagtga
ggatctcacatagccccaccatagctgcaggtgactcttgtactccgagt
gctagcattacaggcacacactactacagctgtcagacatacacatcttt
ttcttggaaggggatacactttatgtacagttgttgttgttcttatcaat
tttaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-157A14.b_45_572 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| |||||||||||||||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr1_189076154_189077268
seq2: B6Ng01-157A14.g_70_1177

seq1  GAATTCACTCGGACAATTCTTCTACGGCAAAGCTTTATTGCTTCATCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCGGACAATTCTTCTACGGCAAAGCTTTATTGCTTCATCTGA  50

seq1  AGGAAGACCCCGAACAAGGAAAATGGTGCTGCTTATATACCCCTCCGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACCCCGAACAAGGAAAATGGTGCTGCTTATATACCCCTCCGTGT  100

seq1  GACGTGTCCGCTCCTGATTAGCTGCTCACTCATCACCCCACTACTACGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGTCCGCTCCTGATTAGCTGCTCACTCATCACCCCACTACTACGCC  150

seq1  CTGGGATGGGCAGTGACTTGGCACTAGGTGCATTTACTCTTGCACCTGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATGGGCAGTGACTTGGCACTAGGTGCATTTACTCTTGCACCTGCG  200

seq1  CACATCACTTGTTTACCAGTTAGGCACAGCGGAGGCTCATGATGGTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACTTGTTTACCAGTTAGGCACAGCGGAGGCTCATGATGGTGATT  250

seq1  GCTCACGGCTCTCCACAGGGTACTGTTTTTCTACTTGTGGAAATGTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACGGCTCTCCACAGGGTACTGTTTTTCTACTTGTGGAAATGTAACT  300

seq1  CTGGCTTATCTTGGTTAGAATCTGCTTTGAACAATTCTTGAATTTTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTATCTTGGTTAGAATCTGCTTTGAACAATTCTTGAATTTTTAAC  350

seq1  AAGAAATAATAATAGACTTTAGTTTGGCCACATAAACACCAAAGATCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAATAATAGACTTTAGTTTGGCCACATAAACACCAAAGATCAAA  400

seq1  AAGCCCCGTGTTTTTCTTATATTCAACAGTGAAATGAATACCTCTATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCGTGTTTTTCTTATATTCAACAGTGAAATGAATACCTCTATAGT  450

seq1  TATTGTATGAAAAGCTGGTTATCAACTGACCTATATTATAAATTTTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATGAAAAGCTGGTTATCAACTGACCTATATTATAAATTTTATAT  500

seq1  ATACATATACATACATACATACATACATACATACATACATACATACATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATACATACATACATACATACATACATACATACATACATACATTC  550

seq1  ATACATACTTATGGCTGCTTTCACATGCTCAGGATCACTGTACATTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACTTATGGCTGCTTTCACATGCTCAGGATCACTGTACATTCTCA  600

seq1  GCATATGTTTCATCTCACTGAGAGATGATAACATCTCTATTATATGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTTTCATCTCACTGAGAGATGATAACATCTCTATTATATGCACT  650

seq1  GAGAGATGATAACATCTCTATTATATGCACTGAGAGATGATAACATCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGATAACATCTCTATTATATGCACTGAGAGATGATAACATCTCT  700

seq1  ATTATATGGGGCTTTAAGCCCTGGGTCGGAGCATAGCTCAGCCCTCCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGGGGCTTTAAGCCCTGGGTCGGAGCATAGCTCAGCCCTCCACC  750

seq1  ACTGCTTTAGAGGAAGAAAAATATAGTTGCAAAGTACCATCAAGGTAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTAGAGGAAGAAAAATATAGTTGCAAAGTACCATCAAGGTAGTT  800

seq1  TTGGTAAGAGATCTCTGCTGGTCCTTTATCAGACCAAGAGCCACTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAGAGATCTCTGCTGGTCCTTTATCAGACCAAGAGCCACTATTTT  850

seq1  ACCATTCGCAAATCTCAGCTTTTTTTGTGGTTATTTCCACAAGATTATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCGCAAATCTCAGCTTTTTTTGTGGTTATTTCCACAAGATTATCA  900

seq1  TCTAGATATGACTTGACACCACATTCCCACCACTACCTCCTCTCTCAGTG  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTAGATATGACTTGACA-CACATTCCCACCACTACCTCCTCTCTCAGTG  949

seq1  AGGATCTCACATAGCCCCAACCATAGCTGCAGGTGACTCTTGTTACTCCC  1000
      |||||||||||||||||| ||||||||||||||||||||||| |||| ||
seq2  AGGATCTCACATAGCCCC-ACCATAGCTGCAGGTGACTCTTG-TACT-CC  996

seq1  GAGTGCTAGCATTACAGGCACACACTACTACAGCTGTCAGACATACACAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTAGCATTACAGGCACACACTACTACAGCTGTCAGACATACACAT  1046

seq1  C-TTTTCTTGAAAGGTGATACACTTTATGTAACAGTTTGTTGTTGTTTCT  1099
      | |||||||| |||| |||||||||||||| |||| ||||||||| ||||
seq2  CTTTTTCTTGGAAGGGGATACACTTTATGT-ACAG-TTGTTGTTG-TTCT  1093

seq1  TATCATATTTAAAATG  1115
      ||||| |||| |||||
seq2  TATCA-ATTTTAAATG  1108