BAC Information

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BAC

Clone NameB6Ng01-157E02
Chromosome6 (Build37)16 (Build37)
Map Location 18,835,448 - 18,835,96869,748,205 - 69,749,169
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157E02.bB6Ng01-157E02.g
ACCDH951541DH951542
length923963
definitionDH951541|Mus musculus domesticus DNA, BAC clone: B6Ng01-157E02, 5' end.DH951542|Mus musculus domesticus DNA, BAC clone: B6Ng01-157E02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(69,748,205 - 69,749,169)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccacattcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccccgtgcccatattttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagttaagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcaggacttgaagtttttatcatac
agatctttcacttccttcgttag
gaattcattcattaattaaggatatattaaattccctttgtaataatcat
aaccatttagatgtgcataatatatggtgagttgtccccacctaaacttt
gtgtaatctaatgtgcatacataaaaacaagtaaataatgtgattttaat
taagaagaaattatgtgaaagagtaagatgatgtctttagtggaaagtca
caaagaatgttagatgaacattggtagaatagtaatgaaaatgtttgcat
tttttatcaaagtttaaacttgaatagttattacttgatctattggcttt
aatcatgttttatgatggtcaagtgacttttataactataacacaaaaat
tatgtagtagagtcaatgtaagaaacaggaacatgggaaagactatagct
agaaagtatatatgaaaatttgcttggctccactatatatactaagactt
cctttacctgattatagaatatgcttacgttttgatgctatgtgattatt
tcctaagaacagaaaatttattcgtccaaagtttaagaaagagaatcttg
atttacatttgaaaagctttgattgaaaagggccagggtttaggccacat
ataggaccatgaacccaagacttcatggagttggcatgcaaaatgggtta
atttctacttttctctagcagataaggtttatattcatctaatcttgttg
actcacatttataaagcagttttagaagatctatgtcataacatttgccc
taatttatggatgacaggaaaaaaattattcaaactttttgattgggggg
tgtctctattttattatcaaatggaaccatcttattcaacaggttgattt
gagtaatagtttttcttacattatctatataagtctgacttttacatatc
tacttatacatatgatacttatacttatatctatgtatatatgtgtgtgt
gtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-157E02.b_48_569 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| ||||||||||||||||| |||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTAACTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAAATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
        |||||||| ||||||||||||||||||||||| ||| |||| || | |
seq2  CGGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTACTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      |||||| ||| ||||||||||||||||||||||||| |||||||||||||
seq2  AGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      |||||||| |||||| |||||||||||||||||||| |||| ||||||||
seq2  CTCAAGAATGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr16_69748205_69749169
seq2: B6Ng01-157E02.g_67_1029

seq1  GAATTCATTCATTAATTAAGGATATATTAAATTCCCTTTGTAATAATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCATTAATTAAGGATATATTAAATTCCCTTTGTAATAATCAT  50

seq1  AACCATTTAGATGTGCATAATATATGGTGAGTTGTCCCCACCTAAACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTAGATGTGCATAATATATGGTGAGTTGTCCCCACCTAAACTTT  100

seq1  GTGTAATCTAATGTGCATACATAAAAACAAGTAAATAATGTGATTTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATCTAATGTGCATACATAAAAACAAGTAAATAATGTGATTTTAAT  150

seq1  TAAGAAGAAATTATGTGAAAGAGTAAGATGATGTCTTTAGTGGAAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAAATTATGTGAAAGAGTAAGATGATGTCTTTAGTGGAAAGTCA  200

seq1  CAAAGAATGTTAGATGAACATTGGTAGAATAGTAATGAAAATGTTTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATGTTAGATGAACATTGGTAGAATAGTAATGAAAATGTTTGCAT  250

seq1  TTTTTATCAAAGTTTAAACTTGAATAGTTATTACTTGATCTATTGGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCAAAGTTTAAACTTGAATAGTTATTACTTGATCTATTGGCTTT  300

seq1  AATCATGTTTTATGATGGTCAAGTGACTTTTATAACTATAACACAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGTTTTATGATGGTCAAGTGACTTTTATAACTATAACACAAAAAT  350

seq1  TATGTAGTAGAGTCAATGTAAGAAACAGGAACATGGGAAAGACTATAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTAGAGTCAATGTAAGAAACAGGAACATGGGAAAGACTATAGCT  400

seq1  AGAAAGTATATATGAAAATTTGCTTGGCTCCACTATATATACTAAGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTATATATGAAAATTTGCTTGGCTCCACTATATATACTAAGACTT  450

seq1  CCTTTACCTGATTATAGAATATGCTTACGTTTTGATGCTATGTGATTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACCTGATTATAGAATATGCTTACGTTTTGATGCTATGTGATTATT  500

seq1  TCCTAAGAACAGAAAATTTATTCGTCCAAAGTTTAAGAAAGAGAATCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGAACAGAAAATTTATTCGTCCAAAGTTTAAGAAAGAGAATCTTG  550

seq1  ATTTACATTTGAAAAGCTTTGATTGAAAAGGGCCAGGGTTTAGGCCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTGAAAAGCTTTGATTGAAAAGGGCCAGGGTTTAGGCCACAT  600

seq1  ATAGGACCATGAACCCAAGACTTCATGGAGTTGGCATGCAAAATGGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACCATGAACCCAAGACTTCATGGAGTTGGCATGCAAAATGGGTTA  650

seq1  ATTTCTACTTTTCTCTAGCAGATAAGGTTTATATTCACCTAATCTTGTTG  700
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTTCTACTTTTCTCTAGCAGATAAGGTTTATATTCATCTAATCTTGTTG  700

seq1  ACTCACATTTATAAAGCAGTTTTAGAAGATCTATGTCATAACATTTGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATTTATAAAGCAGTTTTAGAAGATCTATGTCATAACATTTGCCC  750

seq1  TAATTTATGGATGACAGGAAAAAAATTATTCAAACTTTTTGATTGGGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATGGATGACAGGAAAAAAATTATTCAAACTTTTTGATTGGGGGG  800

seq1  TGTCTCTATTTTATTATCAAATGGAACCATCTTATTCAACAGGTTGATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTATTTTATTATCAAATGGAACCATCTTATTCAACAGGTTGATTT  850

seq1  GAGTAATAGTTTTTCTTACAATTACCCTATATAAGTCTGACTTTTACATA  900
      ||||||||||||||||||| ||||  ||||||||||||||||||||||||
seq2  GAGTAATAGTTTTTCTTAC-ATTA-TCTATATAAGTCTGACTTTTACATA  898

seq1  TCTACTTATACATATGATACTTATACTTATATCTATGTATATATGTGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTATACATATGATACTTATACTTATATCTATGTATATATGTGTGT  948

seq1  GTGTGTGTGTGTGTG  965
      |||||||||||||||
seq2  GTGTGTGTGTGTGTG  963