BAC Information

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BAC

Clone NameB6Ng01-157H21
Chromosome7 (Build37)6 (Build37)
Map Location 57,973,077 - 57,973,12474,108,189 - 74,108,738
singlet/doubletsingletsinglet
Overlap geneNell1
Upstream geneHtatip2, Prmt3, Slc6a5, 4933405O20Rik
Downstream geneEG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157H21.bB6Ng01-157H21.g
ACCDH951712DH951713
length717922
definitionDH951712|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H21, 5' end.DH951713|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(57,973,077 - 57,973,124)(74,108,189 - 74,108,738)
sequence
gaattcttcagagtccagatgtctctctgatcctgtgattctgggatcct
gtgatcctgagttcctgggagtgtcagagctcctgggagtcaagcattaa
ttgggtgttgcagggttgggtcaggagccagagccctgggtttgctctgg
gcacaggttcaagctggaaggaatctggatctgtggcttggttgaggttt
gtgtttttctggttcatttcaaggtcctggttactctgggtattgggaaa
gacattgtggcctcagctatgatcttgggcatttcagagcacctgggagt
tttgctacatctgggtgatttaagagtggatatagagacagcaacccatg
tctgctccaggtgcagtttcagatcagaaggaacttgtgacactggctgt
ttggggcttcctgcatcactggatcctggaggacccagttactctgcgtg
ttggggcagatgttgtggtctcttctgggatcctgggcatttcagagcac
ctgggatttcaaccccctctggatgttgtagcagtgggtgctgaggttgc
tcctaaggactgctcaggtcacaggctcagaccagagaagtgctttgact
tttacatgggaggaggacattattttctaatccaatttacctgatgttct
ataagtttcttgtacttttgtagaaatgtccttcttttttactttttctt
ttttttggggggggggg
gaattctggtgtaattctaataggcctgcctttatatgttacttgacctt
tttcccttactgcttttaatattctatctttatttagtgcatttgttgtt
ctgattattatgtttcgggaggaatttcttttttgctccagtctatttgg
atttctgtaggcttcttgtaggcatcttcttgtgggcatctctttcttta
gcttagggaagttttcttctataattttgttgaagataattaatggccct
ttaagttgaaaatcttcattctcatccactcctattatccctaggtttgg
tcttctcattgtgtcctggatttcctcgatgttttgagttaggatctttt
tggtttttgcatttactttgtccatgtgttatatggaatcttctgcatct
cagattctctcttccatctcttgtattctgttgctaatgcttgcatctat
gattcctgatttctttcctagagtttctatctccagagtcatctcccttt
gtgttttctttattgtttctacttccatttttagatcttggattgttttg
ttcaattgtattacctatttggttgtattttcctgtagttccttaaggga
tttttctgtttcatctttaaggtcttctacctgtttaggagtgttctcct
gtatttcttaagtgagttactcatgcccttgtaaaatcctctaccaccat
catgagatatgattttagatctgacccttgcttctcgagtgagttggggt
atccaggacttgctgtcctgtgcttactggattctgatggttcccagtgg
tcttggtttatgttagggagattcttaggtttgccttttcgccatttggt
atctctggtgttagatgttctagctgactttgggctgggcttgttcctcc
tgtgattctctagcctttgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_57973077_57973124
seq2: B6Ng01-157H21.b_718_761

seq1  AAATGTTTATTTCTTTTTTTCTTTTTCCTTTTTTTTTGGGGGGGGGGG  48
      |||||  |  ||||||||| |||||||  |||||||||||||||||||
seq2  AAATG--TCCTTCTTTTTTACTTTTTC--TTTTTTTTGGGGGGGGGGG  44

seq1: chr6_74108189_74108738
seq2: B6Ng01-157H21.g_72_621 (reverse)

seq1  TGAACAAAACCATACTAGAACTAAAAAGGGAAGTAGACACAATAAAGAAA  50
      |||||||||| || | ||| ||||||| ||||||||| ||||||||||||
seq2  TGAACAAAACAATCCAAGATCTAAAAATGGAAGTAGAAACAATAAAGAAA  50

seq1  ACCCAAAGCAAGGCAACGCTGGAGATAGAAACCCTAGGAAAGAGATCTGG  100
      || |||||  ||   || |||||||||||||| |||||||||| ||| ||
seq2  ACACAAAGGGAGATGACTCTGGAGATAGAAACTCTAGGAAAGAAATCAGG  100

seq1  AACCATAGATGTGAGCATCAGCAACAGAATACAAGAAATGGAAGAGAGAA  150
      || ||||||||  ||||| ||||||||||||||||| |||||||||||||
seq2  AATCATAGATGCAAGCATTAGCAACAGAATACAAGAGATGGAAGAGAGAA  150

seq1  TCTCAGGTGCAGAAGATTCCATAGAGAAGATCGGCACAACAATCAAAGAA  200
      ||| || |||||||||||||||| |  | || |          ||||| |
seq2  TCTGAGATGCAGAAGATTCCATATAACACATGG---------ACAAAGTA  191

seq1  AATACAAAATGCAAAAGGATCCTAACTCAAAACATCCAGGAAATCCAGGA  250
      ||| |||||  ||||| ||||||||||||||||||| |||||||||||||
seq2  AATGCAAAAACCAAAAAGATCCTAACTCAAAACATCGAGGAAATCCAGGA  241

seq1  CACAATGAGAAGACCAAACCTATGGATAATAGGAGTTGATGAGAATGAAG  300
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  CACAATGAGAAGACCAAACCTAGGGATAATAGGAGTGGATGAGAATGAAG  291

seq1  ATTTTCAACATAAAGGGCCAGCAAATATCTTCAACAAAATAATAGAAGAA  350
      ||||||||| ||||||||||  || ||||||||||||||| |||||||||
seq2  ATTTTCAACTTAAAGGGCCATTAATTATCTTCAACAAAATTATAGAAGAA  341

seq1  AACTTCCCAAACATAAAGAAAGAGATGCCC-----ATGAT-CATACAAGA  394
      |||||||| ||  |||||||||||||||||     | ||| | |||||||
seq2  AACTTCCCTAAGCTAAAGAAAGAGATGCCCACAAGAAGATGCCTACAAGA  391

seq1  AGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGAC  444
      ||||||||||| ||||||||||||||| || |||||||||||||||||| 
seq2  AGCCTACAGAAATCCAAATAGACTGGAGCAAAAAAGAAATTCCTCCCGAA  441

seq1  ACATAATAATCAG---AACAAATGCACTAAATAAAGATAGAATATTAAAA  491
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  ACATAATAATCAGAACAACAAATGCACTAAATAAAGATAGAATATTAAAA  491

seq1  GCAGTAAGGGAGAAAGGTCAAGTAACATATAAAGGAAGGCCTATCAGAAT  541
      ||||||||||| ||||||||||||||||||||||| |||||||| |||||
seq2  GCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCAGGCCTATTAGAAT  541

seq1  TACACCAGA  550
      |||||||||
seq2  TACACCAGA  550