BAC Information

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BAC

Clone NameB6Ng01-157K10
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,442 - 18,835,96825,715,353 - 25,715,668
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K10.bB6Ng01-157K10.g
ACCDH951826DH951827
length945316
definitionDH951826|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K10, 5' end.DH951827|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(25,715,353 - 25,715,668)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcaaggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatatttata
tcttgatgatggaatactgatgcaccaaccaagtgcatatgctctgaaga
taatggcatgttccttgacttcgtgagtgcagtgtgtctgacatgtcaga
catcattccacagcactccttcacaccctctggctcacacatatctcagc
atcttttgaaatgttccttgagtcctgatgggagcgacagagatgtgtca
tttaaggctgagctttcaactgtcacttggtctcagccctatctctataa
taactgctaccctcttccaggagggggaacagagggaggtggaagaggag
gaagaggagggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-157K10.b_48_575 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| |||||||||||||||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr1_25715353_25715668
seq2: B6Ng01-157K10.g_73_388 (reverse)

seq1  CCTCTCCCTCCTCTTCCTCCTCTTCCACCTCCCTCTGTTCCCCCTCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCTCCTCTTCCTCCTCTTCCACCTCCCTCTGTTCCCCCTCCTGG  50

seq1  AAGAGGGTAGCAGTTATTATAGAGATAGGGCTGAGACCAAGTGACAGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTAGCAGTTATTATAGAGATAGGGCTGAGACCAAGTGACAGTTG  100

seq1  AAAGCTCAGCCTTAAATGACACATCTCTGTCGCTCCCATCAGGACTCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCAGCCTTAAATGACACATCTCTGTCGCTCCCATCAGGACTCAAG  150

seq1  GAACATTTCAAAAGATGCTGAGATATGTGTGAGCCAGAGGGTGTGAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTCAAAAGATGCTGAGATATGTGTGAGCCAGAGGGTGTGAAGGA  200

seq1  GTGCTGTGGAATGATGTCTGACATGTCAGACACACTGCACTCACGAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGGAATGATGTCTGACATGTCAGACACACTGCACTCACGAAGTC  250

seq1  AAGGAACATGCCATTATCTTCAGAGCATATGCACTTGGTTGGTGCATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACATGCCATTATCTTCAGAGCATATGCACTTGGTTGGTGCATCAG  300

seq1  TATTCCATCATCAAGA  316
      ||||||||||||||||
seq2  TATTCCATCATCAAGA  316