BAC Information

Click to search

BAC

Clone NameB6Ng01-157L24
Chromosome6 (Build37)7 (Build37)
Map Location 18,835,442 - 18,835,9686,407,269 - 6,408,355
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157L24.bB6Ng01-157L24.g
ACCDH951899DH951900
length9701,080
definitionDH951899|Mus musculus domesticus DNA, BAC clone: B6Ng01-157L24, 5' end.DH951900|Mus musculus domesticus DNA, BAC clone: B6Ng01-157L24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(6,407,269 - 6,408,355)
sequence
gaattctttgttcagttctgagccccattttttaatggggtgatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatctttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttacttccttagttagagtcacgccgagatattttatattattt
gtgactatgagacgtgtgtt
gaattcactccacaacttgcacacaatttggaagacaagagtgtctctta
ggcatttcagctgatgtgagcatcttctaggtagactggcttgtcagaga
gtgtctctaagcagtttttactgcttaaatatgcgtaggcagggagaagc
ctagtatatttggtcatattcaagaactttctgaagcctttgcgttgttt
acttcccgagcttacgaagctttccctgtaggatggaccatttcatttcc
ccgagaacagtggctctcaaccttcctaatgctgtgactcttaaatgcag
ttcctcatattgtggtgatccccaaccataaaattattttcattgctatt
tcataactgtaatttgttcatttttataaaatgtaatgtaaatatctgtg
ttttctgatggtcttaggtgatccctgtgaaagggtcatttgaaccccaa
aggggtcacgccccacaagttgagaaccactgccttagctcatcttgtgt
cttaaggagtttccttcaaagttgaaaggttttattttgaagaaatttgt
tagacagcattcttccctctctccctcttcctttccctccctccctaccc
tctcctttgtgtgcattcacacatatgtgtactcacattcaggtacctgt
agaggccagactcactcactcactcactcactcactcactcactctcctg
gagctggagttcccagccaattatgggctgtctactgtgggtgcttggag
ctgaactttggccctcctcaagaagagcaatactcttatttatttattta
tttatttatttatttattattattgagacagggtttctctgtatagcctt
ggctgtcctggaactcactttgtagaccaggctggccttgaactcagaaa
tccgcttgcctttgcctcccgagtgctgggatcaaagcatgagcaccatg
cctggctagagcaaacatttcttacctctgagttgtctattctagcttct
gagtacatctattttaattataaatccaaaagggttctgtaaaggaatgc
ttccctacttatgcagatgaaggcaaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-157L24.b_48_575 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||| | ||||||||  ||||||||||||||||||||||| ||  |||| 
seq2  TGGGTACAGGGGAAAGATTCCTGAACAGAACAGCAATGGCTTGCTCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAGGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATCACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr7_6407269_6408355
seq2: B6Ng01-157L24.g_66_1145

seq1  GAATTCACTCCACAACTTGCACACAATTTGGAAGACAAGAGTGTCTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCACAACTTGCACACAATTTGGAAGACAAGAGTGTCTCTTA  50

seq1  GGCATTTCAGCTGATGTGAGCATCTTCTAGGTAGACTGGCTTGTCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCAGCTGATGTGAGCATCTTCTAGGTAGACTGGCTTGTCAGAGA  100

seq1  GTGTCTCTAAGCAGTTTTTACTGCTTAAATATGCGTAGGCAGGGAGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTAAGCAGTTTTTACTGCTTAAATATGCGTAGGCAGGGAGAAGC  150

seq1  CTAGTATATTTGGTCATATTCAAGAACTTTCTGAAGCCTTTGCGTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATATTTGGTCATATTCAAGAACTTTCTGAAGCCTTTGCGTTGTTT  200

seq1  ACTTCCCGAGCTTACGAAGCTTTCCCTGTAGGATGGACCATTTCATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCGAGCTTACGAAGCTTTCCCTGTAGGATGGACCATTTCATTTCC  250

seq1  CCGAGAACAGTGGCTCTCAACCTTCCTAATGCTGTGACTCTTAAATGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGAACAGTGGCTCTCAACCTTCCTAATGCTGTGACTCTTAAATGCAG  300

seq1  TTCCTCATATTGTGGTGATCCCCAACCATAAAATTATTTTCATTGCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATATTGTGGTGATCCCCAACCATAAAATTATTTTCATTGCTATT  350

seq1  TCATAACTGTAATTTGTTCATTTTTATAAAATGTAATGTAAATATCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACTGTAATTTGTTCATTTTTATAAAATGTAATGTAAATATCTGTG  400

seq1  TTTTCTGATGGTCTTAGGTGATCCCTGTGAAAGGGTCATTTGAACCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGATGGTCTTAGGTGATCCCTGTGAAAGGGTCATTTGAACCCCAA  450

seq1  AGGGGTCACGCCCCACAAGTTGAGAACCACTGCCTTAGCTCATCTTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCACGCCCCACAAGTTGAGAACCACTGCCTTAGCTCATCTTGTGT  500

seq1  CTTAAGGAGTTTCCTTCAAAGTTGAAAGGTTTTATTTTGAAGAAATTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGAGTTTCCTTCAAAGTTGAAAGGTTTTATTTTGAAGAAATTTGT  550

seq1  TAGACAGCATTCTTCCCTCTCTCCCTCTTCCTTTCCCTCCCTCCCTACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGCATTCTTCCCTCTCTCCCTCTTCCTTTCCCTCCCTCCCTACCC  600

seq1  TCTCCTTTGTGTGCATTCACACATATGTGTACTCACATTCAGGTACCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTGTGTGCATTCACACATATGTGTACTCACATTCAGGTACCTGT  650

seq1  AGAGGCCAGACTCACTCACTCACTCACTCACTCACTCACTCACTCTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCAGACTCACTCACTCACTCACTCACTCACTCACTCACTCTCCTG  700

seq1  GAGCTGGAGTT-CCAGCCAATTATGGGCTGTCTACTGTGGGTGCTTGGAG  749
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGAGTTCCCAGCCAATTATGGGCTGTCTACTGTGGGTGCTTGGAG  750

seq1  CTGAACTTTGGCCCTCCTCAAGAAGAGCAAATACTCTTATTTATTTATTT  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTGAACTTTGGCCCTCCTCAAGAAGAGC-AATACTCTTATTTATTTATTT  799

seq1  ATTTATTTATTTATTTATTTATTTATTTGAGACAGGGTTTCTCTGTATAG  849
      ||||||||||||||||| |||||   ||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTA-TTATT--ATTGAGACAGGGTTTCTCTGTATAG  846

seq1  CCTTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCA  896

seq1  GAAATCCGCTTGCCTTTGCCTCCCGAGTGCTGGGATCAAAGGCATGAGCC  949
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  GAAATCCGCTTGCCTTTGCCTCCCGAGTGCTGGGATCAAA-GCATGAG-C  944

seq1  ACCATGCCTGGCTAGAGCAAACATTCTTAACCTCTGAGTTGTCTA-TCTA  998
      |||||||||||||||||||||||||  | |||||||||||||||| ||||
seq2  ACCATGCCTGGCTAGAGCAAACATTTCTTACCTCTGAGTTGTCTATTCTA  994

seq1  GCTCCTGAGTACATCTATTTTAAATTTATAATCCAAAAGGTGTCTGTAAA  1048
      ||| ||||||||||||||||||| | || |||||||||||  ||||| ||
seq2  GCTTCTGAGTACATCTATTTTAATTATA-AATCCAAAAGGGTTCTGT-AA  1042

seq1  AGGAATGCTTCCCTACCTATGCAGGATGAAGGCAACCAT  1087
      |||||||||||||||| |||||| |||||||||||||||
seq2  AGGAATGCTTCCCTACTTATGCA-GATGAAGGCAACCAT  1080