BAC Information

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BAC

Clone NameB6Ng01-158F14
Chromosome6 (Build37)
Map Location 127,242,648 - 127,385,742
singlet/doubletdoublet
Overlap geneEG640703, LOC100043848
Upstream geneLOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642, LOC100043578
Downstream geneParp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158F14.bB6Ng01-158F14.g
ACCDH952319DH952320
length1,012530
definitionDH952319|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F14, 5' end.DH952320|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,384,725 - 127,385,742)(127,242,648 - 127,243,183)
sequence
gaattctttttttttttttttttggttttttcgagacagggtttctctgt
gtagccttggctgtcctggaactcactctggcctcgaactaagaaatctg
cctgcctctgcctcccaagtgctgggattaaaggtgtgtgccaccacgcc
cggcttgagaatctgaattcttaaatgatcacagtgatccacgtttctgg
gctgagtggtcccataagctgcctgttagtcacctgtgagaataaaccgt
ccaatcgtgccgcctgggcccaactcctggctctaggttctgtgttgtga
gcgaagttatcaaaagtcacttgacctgtgcttcgctccctccctttaaa
ctcatctgaagatgatgccgctggaaacctagctccagtctccttcttcc
tctgatctctcccctgttccctctttctctttgcacaatacactgaaact
aacccttcttctacatccttgcttaaggcagctaagaatgactttaaaaa
aaaaatcacttgtcctgcagttttccggggaagacttagcatgttcatcc
tgcaagatacaaagctggaccggctgctcacctgagtctacttggtgatg
tcgtatgatgcaaacctaaagagcttctttctgccttcttactgatgtgt
tcttccgaagagcatggcagccagattaaagccacgacatttcctaattt
aaattctggcaatgtattcactagtggtcctgactagaaagtgacgagaa
gctctcttagaacccactctcgggttttcaaaggggaaagatggaaacat
aatccaaggaaaggggagttgcttcggacctgtaccactccaaggctgga
gtcaaacaagtcctgagacttgcagaaactgtctagtgacagcaagatca
actttgtgcagtgcgctgggaacaggaagattcagagccagtgcttggag
cagatggtgtatgttagcagatgatagacagccagagtacccagacctgc
ttagcttcatca
cctcaaggaggcacttgctgagctgcccttggccttttgcccctcacttt
gctaatgtctggagtgtaaggtggtgcagctaaaacagcctcacgggtat
ccagaagagagaggtgctgtagtaagcaaggtaatgcaagctgacaagga
ggctggtgtatcaacgatgttacagaactgacaacctggctttaaactgc
ctacctctaactctcttgaaaggaagattaatctgcttatctaagctgct
ttcttttttttcataatctccgttaaagagactgataacactaactggat
cctaaaacatcacgtttactgataggaatgctgaggtctaagggacagta
ctgagtgaacaaagccatgaagaaacatggcccttaggtctcccacatgc
tgggcgtgtgctttaccactgagctgtgtgcccagcttcacctttcatct
acctgaaaaatccattcactattggcttacttgtttgtttgtttgtttgt
tttatatgaggatgtttgtttgggggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_127384725_127385742
seq2: B6Ng01-158F14.b_46_1057 (reverse)

seq1  TGATGGAAGCTAGGCAGGTCTTGGGTAACTCTGGCTGTCTGTCATCTGCT  50
      |||| ||||||| ||||||| ||||| ||||||||||||| |||||||||
seq2  TGAT-GAAGCTAAGCAGGTC-TGGGT-ACTCTGGCTGTCTATCATCTGCT  47

seq1  AACATTACACCATCTGCTCCAAGCACTGGCCCTGGATCTTCCTGTTCCCA  100
      |||| ||||||||||||||||||||||||| ||| |||||||||||||||
seq2  AACA-TACACCATCTGCTCCAAGCACTGGCTCTGAATCTTCCTGTTCCCA  96

seq1  GCGCACTTGCACAAAGTTGATCTTGCTGTCACTGGGCAGTTTCTGCAAGT  150
      |||||| |||||||||||||||||||||||||| | ||||||||||||||
seq2  GCGCAC-TGCACAAAGTTGATCTTGCTGTCACTAGACAGTTTCTGCAAGT  145

seq1  CTCAGG-CTTGTTTTGAACTCCAGCCTTGGAGTGGTACAGGTCCGAGGCA  199
      |||||| |||||||   ||||||||||||||||||||||||||||| |||
seq2  CTCAGGACTTGTTT--GACTCCAGCCTTGGAGTGGTACAGGTCCGAAGCA  193

seq1  ACTCCCCTTTTCCTTTGGTTATGTTTCCCTCTTTCCCCTTTGAAAACCCG  249
      ||||||| ||||||| | |||||||||| |||||||||||||||||||||
seq2  ACTCCCC-TTTCCTTGGATTATGTTTCCATCTTTCCCCTTTGAAAACCCG  242

seq1  AGAGTGGGTTCT-GGGGAGCTTCTCGTCACTTTCTAGTCAGGACCACTGG  298
      ||||||||||||  | |||||||||||||||||||||||||||||||| |
seq2  AGAGTGGGTTCTAAGAGAGCTTCTCGTCACTTTCTAGTCAGGACCACTAG  292

seq1  TGAATACATTGCCAGAATTTAAATTAGGAAATGTCGTGGCTTTAATCTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACATTGCCAGAATTTAAATTAGGAAATGTCGTGGCTTTAATCTGG  342

seq1  CTGCCATGCTCTTCGGAAGAACACATCAGTAAGAAGGCAGAAAGAAGCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATGCTCTTCGGAAGAACACATCAGTAAGAAGGCAGAAAGAAGCTC  392

seq1  TTTAGGTTTGCATCATACGACATCACCAAGTAGACTCAGGTGAGCAGCCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTTTGCATCATACGACATCACCAAGTAGACTCAGGTGAGCAGCCG  442

seq1  GTCCAGCTTTGTATCTTGCAGGATGAACATGCTAAGTCTTCCCCGGAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCTTTGTATCTTGCAGGATGAACATGCTAAGTCTTCCCCGGAAAA  492

seq1  CTGCAGGACAAGTGATTTTTTTTTTAAAGTCATTCTTAGCTGCCTTAAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGACAAGTGATTTTTTTTTTAAAGTCATTCTTAGCTGCCTTAAGC  542

seq1  AAGGATGTAGAAGAAGGGTTAGTTTCAGTGTATTGTGCAAAGAGAAAGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGTAGAAGAAGGGTTAGTTTCAGTGTATTGTGCAAAGAGAAAGAG  592

seq1  GGAACAGGGGAGAGATCAGAGGAAGAAGGAGACTGGAGCTAGGTTTCCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGGGAGAGATCAGAGGAAGAAGGAGACTGGAGCTAGGTTTCCAG  642

seq1  CGGCATCATCTTCAGATGAGTTTAAAGGGAGGGAGCGAAGCACAGGTCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCATCATCTTCAGATGAGTTTAAAGGGAGGGAGCGAAGCACAGGTCAA  692

seq1  GTGACTTTTGATAACTTCGCTCACAACACAGAACCTAGAGCCAGGAGTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTTGATAACTTCGCTCACAACACAGAACCTAGAGCCAGGAGTTG  742

seq1  GGCCCAGGCGGCACGATTGGACGGTTTATTCTCACAGGTGACTAACAGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGGCGGCACGATTGGACGGTTTATTCTCACAGGTGACTAACAGGC  792

seq1  AGCTTATGGGACCACTCAGCCCAGAAACGTGGATCACTGTGATCATTTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATGGGACCACTCAGCCCAGAAACGTGGATCACTGTGATCATTTAA  842

seq1  GAATTCAGATTCTCAAGCCGGGCGTGGTGGCACACACCTTTAATCCCAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTCTCAAGCCGGGCGTGGTGGCACACACCTTTAATCCCAGC  892

seq1  ACTTGGGAGGCAGAGGCAGGCAGATTTCTTAGTTCGAGGCCAGAGTGAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGAGGCAGAGGCAGGCAGATTTCTTAGTTCGAGGCCAGAGTGAGT  942

seq1  TCCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAAACCAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAAACCAAA  992

seq1  AAAAAAAAAAAAAAGAATTC  1018
      ||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGAATTC  1012

seq1: chr6_127242648_127243183
seq2: B6Ng01-158F14.g_69_604

seq1  GAATTCCCTCAAGGAGGCACTTGCTGAGCTGCCCTTGGCCTTTTGCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCAAGGAGGCACTTGCTGAGCTGCCCTTGGCCTTTTGCCCCT  50

seq1  CACTTTGCTAATGTCTGGAGTGTAAGGTGGTGCAGCTAAAACAGCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGCTAATGTCTGGAGTGTAAGGTGGTGCAGCTAAAACAGCCTCAC  100

seq1  GGGTATCCAGAAGAGAGAGGTGCTGTAGTAAGCAAGGTAATGCAAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCCAGAAGAGAGAGGTGCTGTAGTAAGCAAGGTAATGCAAGCTGA  150

seq1  CAAGGAGGCTGGTGTATCAACGATGTTACAGAACTGACAACCTGGCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGGCTGGTGTATCAACGATGTTACAGAACTGACAACCTGGCTTTA  200

seq1  AACTGCCTACCTCTAACTCTCTTGAAAGGAAGATTAATCTGCTTATCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCTACCTCTAACTCTCTTGAAAGGAAGATTAATCTGCTTATCTAA  250

seq1  GCTGCTTTCTTTTTTTTCATAATCTCCGTTAAAGAGACTGATAACACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTCTTTTTTTTCATAATCTCCGTTAAAGAGACTGATAACACTAA  300

seq1  CTGGATCCTAAAACATCACGTTTACTGATAGGAATGCTGAGGTCTAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCCTAAAACATCACGTTTACTGATAGGAATGCTGAGGTCTAAGGG  350

seq1  ACAGTACTGAGTGAACAAAGCCATGAAGAAACATGGCCCTTAGGTCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACTGAGTGAACAAAGCCATGAAGAAACATGGCCCTTAGGTCTCCC  400

seq1  ACATGCTGGGCGTGTGCTTTACCACTGAGCTGTGTGCCCAGCTTCACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGGGCGTGTGCTTTACCACTGAGCTGTGTGCCCAGCTTCACCTT  450

seq1  TCATCTACCTGAAAAATCCATTCACTATTGGCTTACTTGTTTGTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTACCTGAAAAATCCATTCACTATTGGCTTACTTGTTTGTTTGTTT  500

seq1  GTTTGTTTTATATGAGGATGTTTGTTTGGGGGTGTT  536
      ||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTATATGAGGATGTTTGTTTGGGGGTGTT  536