BAC Information

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BAC

Clone NameB6Ng01-158J21
Chromosome6 (Build37)
Map Location 128,210,580 - 128,339,170
singlet/doubletdoublet
Overlap geneTead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1
Upstream geneEG640703, LOC100043848, Parp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560
Downstream geneNrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158J21.bB6Ng01-158J21.g
ACCDH952517DH952518
length3321,007
definitionDH952517|Mus musculus domesticus DNA, BAC clone: B6Ng01-158J21, 5' end.DH952518|Mus musculus domesticus DNA, BAC clone: B6Ng01-158J21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,338,839 - 128,339,170)(128,210,580 - 128,211,590)
sequence
tatattcatcagtatatgggtgttgattccatataatgaattggggtatc
tatggtcaccaggtggctttatgtcatcttcaagaccccagactcaagag
aagaatgggttccattgccccccatgtctctactgcccactgggtgcagg
gtttcaggaggcctgcttccacatccttgacttgcctagctgtcaagaga
gtcctccttatgtaccaggcacttgcccatcatggaagaggctggtccag
agagaatgatgggagggtgttgaggtcaggcagatgtcctcattgaggct
gggagtcttttgtgttggtgggggtgggggtg
gaattcatctatcctggagcatctgagatagtgggtaagggtagctacct
acactgataccctaggctccattcttgggactcacacagtagagaaagag
aaccagcaacctgttggagctgcaagctgtcctctggcttccatgttagt
gccatgacatgaacacctccccatacacatgcatgacccctcaccctcaa
accccagtcacaaacacacatgcgcgcgtgcgcacacacacacacacaca
cacacacacacacacacacacacacatgagcccccacccccaagccccag
ccacacacacactcccaccccacctccaacccctttaatcctagcattcc
tgaggcagaggcaggcagatctctgaattagagaccaacctcatctacag
agtgagatctaggacagacaagaatacacacataccaaaacaaaacaaaa
aacaaaaaacctgtctggaaaaagaatataaaaatatataaagaataaaa
aatatataaagaatatataaaagaatgggggtgggggggataaaactcaa
caaacatcattctctggcccagagatgacttgctcttccagataatgaag
atgcaatcaccagcatctacatgttggctcaggaccaccgagaactggag
tcccaggagtcccaataccctcttcgggcctctgaggcaccaagcatgcc
catagtacagaaaaaaataaataaaataaaaattaaaaattaaaatacac
acatataaatagaataaataaatttatttttctattattttaaaattcac
cattgtctacctactagtagtgaacatgatgtcaccagctccctcaagtt
cctgcagtcacaactcttgcacagtggactgtactctgaactttcagcca
agtaactctctcttgctatgtgcttctgacagagtctttatcacagcaca
ggaaaggaaggagagtacagcacacattgtagtttggttggttggttggt
tggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128338839_128339170
seq2: B6Ng01-158J21.b_46_377 (reverse)

seq1  CACCCCCACCCCCACCAACACAAAAGACTCCCAGCCTCAATGAGGACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCACCCCCACCAACACAAAAGACTCCCAGCCTCAATGAGGACATC  50

seq1  TGCCTGACCTCAACACCCTCCCATCATTCTCTCTGGACCAGCCTCTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACCTCAACACCCTCCCATCATTCTCTCTGGACCAGCCTCTTCCA  100

seq1  TGATGGGCAAGTGCCTGGTACATAAGGAGGACTCTCTTGACAGCTAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGCAAGTGCCTGGTACATAAGGAGGACTCTCTTGACAGCTAGGCA  150

seq1  AGTCAAGGATGTGGAAGCAGGCCTCCTGAAACCCTGCACCCAGTGGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGGATGTGGAAGCAGGCCTCCTGAAACCCTGCACCCAGTGGGCAG  200

seq1  TAGAGACATGGGGGGCAATGGAACCCATTCTTCTCTTGAGTCTGGGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACATGGGGGGCAATGGAACCCATTCTTCTCTTGAGTCTGGGGTCT  250

seq1  TGAAGATGACATAAAGCCACCTGGTGACCATAGATACCCCAATTCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGACATAAAGCCACCTGGTGACCATAGATACCCCAATTCATTAT  300

seq1  ATGGAATCAACACCCATATACTGATGAATATA  332
      ||||||||||||||||||||||||||||||||
seq2  ATGGAATCAACACCCATATACTGATGAATATA  332

seq1: chr6_128210580_128211590
seq2: B6Ng01-158J21.g_66_1072

seq1  GAATTCATCTATCCTGGAGCATCTGAGATAGTGGGTAAGGGTAGCTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTATCCTGGAGCATCTGAGATAGTGGGTAAGGGTAGCTACCT  50

seq1  ACACTGATACCCTAGGCTCCATTCTTGGGACTCACACAGTAGAGAAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGATACCCTAGGCTCCATTCTTGGGACTCACACAGTAGAGAAAGAG  100

seq1  AACCAGCAACCTGTTGGAGCTGCAAGCTGTCCTCTGGCTTCCATGTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCAACCTGTTGGAGCTGCAAGCTGTCCTCTGGCTTCCATGTTAGT  150

seq1  GCCATGACATGAACACCTCCCCATACACATGCATGACCCCTCACCCTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGACATGAACACCTCCCCATACACATGCATGACCCCTCACCCTCAA  200

seq1  ACCCCAGTCACAAACACACATGCGCGCGTGCGCACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTCACAAACACACATGCGCGCGTGCGCACACACACACACACACA  250

seq1  CACACACACACACACACACACACACATGAGCCCCCACCCCCAAGCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACATGAGCCCCCACCCCCAAGCCCCAG  300

seq1  CCACACACACACTCCCACCCCACCTCCAACCCCTTTAATCCTAGCATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACACACTCCCACCCCACCTCCAACCCCTTTAATCCTAGCATTCC  350

seq1  TGAGGCAGAGGCAGGCAGATCTCTGAATTAGAGACCAACCTCATCTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGAGGCAGGCAGATCTCTGAATTAGAGACCAACCTCATCTACAG  400

seq1  AGTGAGATCTAGGACAGACAAGAATACACACATACCAAAACAAAACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGATCTAGGACAGACAAGAATACACACATACCAAAACAAAACAAAA  450

seq1  AACAAAAAACCTGTCTGGAAAAAGAATATAAAAATATATAAAGAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAACCTGTCTGGAAAAAGAATATAAAAATATATAAAGAATAAAA  500

seq1  AATATATAAAGAATATATAAAAGAATGGGGGTGGGGGGGATAAAACTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAAAGAATATATAAAAGAATGGGGGTGGGGGGGATAAAACTCAA  550

seq1  CAAACATCATTCTCTGGCCCAGAGATGACTTGCTCTTCCAGATAATGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCATTCTCTGGCCCAGAGATGACTTGCTCTTCCAGATAATGAAG  600

seq1  ATGCAATCACCAGCATCTACATGTTGGCTCAGGACCACCGAGAACTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATCACCAGCATCTACATGTTGGCTCAGGACCACCGAGAACTGGAG  650

seq1  TCCCAGGAGTCCCAATACCCTCTTCGGGCCTCTGAGGCACCAAGCATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGAGTCCCAATACCCTCTTCGGGCCTCTGAGGCACCAAGCATGCC  700

seq1  CATAGTACAGAAAAAAATAAAT-AAATAAAAATTAAAAATTAAAATACAC  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATAGTACAGAAAAAAATAAATAAAATAAAAATTAAAAATTAAAATACAC  750

seq1  ACATATAAATAGAATAAATAAATTTATTTTTCTATTATTTAAAAATTCAC  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACATATAAATAGAATAAATAAATTTATTTTTCTATTATTTTAAAATTCAC  800

seq1  CATTGTCTACCTACTAGTAGTGAACATGATGTCACCAGCTCCCTCAAGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCTACCTACTAGTAGTGAACATGATGTCACCAGCTCCCTCAAGTT  850

seq1  CCTGCAGTCACAAC-CCTGCACAGTGGACTGTAACTCTGAACTTTCAGCC  898
      |||||||||||||| | ||||||||||||||| |||||||||||||||||
seq2  CCTGCAGTCACAACTCTTGCACAGTGGACTGT-ACTCTGAACTTTCAGCC  899

seq1  AAGTAAACTCTCTCTTGCTAATGTGCTTCTGACAGAGTCTTTTATCACAG  948
      |||| |||||||||||||| ||||||||||||||||||| ||||||||||
seq2  AAGT-AACTCTCTCTTGCT-ATGTGCTTCTGACAGAGTC-TTTATCACAG  946

seq1  CAACAGGAAAAGAAGGAGAGTAACAGCACACATTGTAGTTTGGTTGGTTG  998
      | |||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  C-ACAGGAAAGGAAGGAGAGT-ACAGCACACATTGTAGTTTGGTTGGTTG  994

seq1  GTTGGTTGGTTGG  1011
      |||||||||||||
seq2  GTTGGTTGGTTGG  1007