BAC Information

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BAC

Clone NameB6Ng01-158O01
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,442 - 18,835,968197,048,730 - 197,049,830
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158O01.bB6Ng01-158O01.g
ACCDH952705DH952706
length9541,093
definitionDH952705|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O01, 5' end.DH952706|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(197,048,730 - 197,049,830)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagttttatcatac
agatctttcacctccttagttagagtcacgccagatattttatattattt
gtga
gaattccatggtttcaatcagagacagtcaagtccatgtgtctcacatga
attgttactgtggaagtcaagcactttctcttagaggttttacctcctca
gtccccaggcacaggaggttgcttggccccatcttattgttgaatattct
gtgagctgagatcagatgaatctgtgaacctcatgtgggccgaactttaa
aactttaggagataaactttttgaagtgatttttacaattaaaatcttgg
cagttatttttggtcacttttcctcagaccattgcctcatggcatcaaag
gcagccaaaattaattacactgaaagactgcctttgacccttccaccaga
catgatctgtggtttcccagatttttcctgagggaactgggtggggaaag
aaacaagggataatgacataaacacagaggaaatgcagggacttgaacct
aactttgaagccttgcggtgttcaatctctccttagccagggtaaggcag
gttatattaagggagactgtaatacagctaaaggccatggttccctcttt
ctaggcaaaactgctttctttcttcagtcttttaaaaatatttttctact
tctttacctttagagctctatctaaaaccaagatggttgttctaccatct
tggtttacattgtgctcagggttcttttatggagagttcttgcacccaag
ctccatgtcaaacaaatgtttcaactcagatgatgaacagatgaccaaat
gaatacttttctgttctccacagtgtttcttacttttggtttgtgcacag
attgttccttgttgccctggtaatttacttgggccactgtcactatggtg
cccaggcacctccatccacagagttcttttgcttacctggaacattccag
aggcgcaggggcactacagaagctggtgggagacatttatcctgtgagac
tatctgagtggttcttcagtgagctacattctcagactactgtgatatat
aaatgagggtctggacaaagcaaccttattcttgatcaggagggtgtgct
tatgaaaaggatttactatgacaggacctgccgcttgggttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-158O01.b_48_575 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr1_197048730_197049830
seq2: B6Ng01-158O01.g_66_1158 (reverse)

seq1  TAAAACCAAGC-GCAGTTCCTGTC-TAGTTAAATCCCTTTTCATAAGCAC  48
      |||| |||||| |||| ||||||| ||| ||||| |||||||||||||||
seq2  TAAACCCAAGCGGCAGGTCCTGTCATAG-TAAAT-CCTTTTCATAAGCAC  48

seq1  ACCCTCCTGATCAAGAATAAAGTTTGCTTTGTCCAGACCCTCATTTATAG  98
      |||||||||||||||||| ||| |||||||||||||||||||||||||| 
seq2  ACCCTCCTGATCAAGAAT-AAGGTTGCTTTGTCCAGACCCTCATTTATA-  96

seq1  TAATCCACAGGTTAGTCTGAGAATGTAGCTCACTTGAAGAACCACCTCAG  148
      ||   |||||  ||||||||||||||||||||| |||||||||| |||||
seq2  TA--TCACAG--TAGTCTGAGAATGTAGCTCAC-TGAAGAACCA-CTCAG  140

seq1  ATAGTCTCACAGGATAAATGTCTCCCACCAGCTTCTGTAGTGCCCCTGCG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTCACAGGATAAATGTCTCCCACCAGCTTCTGTAGTGCCCCTGCG  190

seq1  CCTCTGGAATGTTCCAGGTAAGCAAAAGAACTCTGTGGATGGAGGTGCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGAATGTTCCAGGTAAGCAAAAGAACTCTGTGGATGGAGGTGCCT  240

seq1  GGGCACCATAGTGACAGTGGCCCAAGTAAATTACCAGGGCAACAAGGAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCATAGTGACAGTGGCCCAAGTAAATTACCAGGGCAACAAGGAAC  290

seq1  AATCTGTGCACAAACCAAAAGTAAGAAACACTGTGGAGAACAGAAAAGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTGCACAAACCAAAAGTAAGAAACACTGTGGAGAACAGAAAAGTA  340

seq1  TTCATTTGGTCATCTGTTCATCATCTGAGTTGAAACATTTGTTTGACATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGGTCATCTGTTCATCATCTGAGTTGAAACATTTGTTTGACATG  390

seq1  GAGCTTGGGTGCAAGAACTCTCCATAAAAGAACCCTGAGCACAATGTAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGGTGCAAGAACTCTCCATAAAAGAACCCTGAGCACAATGTAAA  440

seq1  CCAAGATGGTAGAACAACCATCTTGGTTTTAGATAGAGCTCTAAAGGTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGGTAGAACAACCATCTTGGTTTTAGATAGAGCTCTAAAGGTAA  490

seq1  AGAAGTAGAAAAATATTTTTAAAAGACTGAAGAAAGAAAGCAGTTTTGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGAAAAATATTTTTAAAAGACTGAAGAAAGAAAGCAGTTTTGCC  540

seq1  TAGAAAGAGGGAACCATGGCCTTTAGCTGTATTACAGTCTCCCTTAATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAGGGAACCATGGCCTTTAGCTGTATTACAGTCTCCCTTAATAT  590

seq1  AACCTGCCTTACCCTGGCTAAGGAGAGATTGAACACCGCAAGGCTTCAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCCTTACCCTGGCTAAGGAGAGATTGAACACCGCAAGGCTTCAAA  640

seq1  GTTAGGTTCAAGTCCCTGCATTTCCTCTGTGTTTATGTCATTATCCCTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTTCAAGTCCCTGCATTTCCTCTGTGTTTATGTCATTATCCCTTG  690

seq1  TTTCTTTCCCCACCCAGTTCCCTCAGGAAAAATCTGGGAAACCACAGATC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCCCACCCAGTTCCCTCAGGAAAAATCTGGGAAACCACAGATC  740

seq1  ATGTCTGGTGGAAGGGTCAAAGGCAGTCTTTCAGTGTAATTAATTTTGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGTGGAAGGGTCAAAGGCAGTCTTTCAGTGTAATTAATTTTGGC  790

seq1  TGCCTTTGATGCCATGAGGCAATGGTCTGAGGAAAAGTGACCAAAAATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGATGCCATGAGGCAATGGTCTGAGGAAAAGTGACCAAAAATAA  840

seq1  CTGCCAAGATTTTAATTGTAAAAATCACTTCAAAAAGTTTATCTCCTAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAGATTTTAATTGTAAAAATCACTTCAAAAAGTTTATCTCCTAAA  890

seq1  GTTTTAAAGTTCGGCCCACATGAGGTTCACAGATTCATCTGATCTCAGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAGTTCGGCCCACATGAGGTTCACAGATTCATCTGATCTCAGCT  940

seq1  CACAGAATATTCAACAATAAGATGGGGCCAAGCAACCTCCTGTGCCTGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATATTCAACAATAAGATGGGGCCAAGCAACCTCCTGTGCCTGGG  990

seq1  GACTGAGGAGGTAAAACCTCTAAGAGAAAGTGCTTGACTTCCACAGTAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGAGGTAAAACCTCTAAGAGAAAGTGCTTGACTTCCACAGTAAC  1040

seq1  AATTCATGTGAGACACATGGACTTGACTGTCTCTGATTGAAACCATGGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGTGAGACACATGGACTTGACTGTCTCTGATTGAAACCATGGAA  1090

seq1  TTC  1101
      |||
seq2  TTC  1093