BAC Information

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BAC

Clone NameB6Ng01-159L13
Chromosome6 (Build37)
Map Location 129,613,507 - 129,614,641
singlet/doubletsinglet
Overlap genenone
Upstream geneClec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2
Downstream geneKlrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159L13.bB6Ng01-159L13.g
ACCDH953301DH953302
length1,1251,168
definitionDH953301|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L13, 5' end.DH953302|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgtgccccattttttaatggggttatttggtt
ttctggagtccatcttcttgagttctttatttatattggatattagtccc
ctatctgatttaggattggtaaagatcctttcccaatttgttggtggcct
ttttgtcttattgacagtgtctgttgccttatagaagctttgcaatttta
tgaggtcccgtttgtcaactctcgatcttacagcataagccattgctgtt
ctattcaggattttttctcctgtgcccatatcttcaaggctttcctccac
tttctcctctctaagtttcagtgtctctggtttatagtgtttttcttttt
tccctcagtatgactcccttggagaaaatgtttttatttgccaggggcaa
ataaatctggagacaacctctgggttagaaatggagacatgtccttactt
catcctctaggtctaggactccatctgtgtcagatctgtgcaggcccagc
catgtcaccacagtctaagtccaaatgtactcaagccctgttttgtttcc
aaggccttgattactgatgtcctccatttctttctggctcttacactctt
tctgtctgcttttcctcagtgttccctgagcccagaggggagggatttca
tggagacatccattttaaggtacatgttctacgatctctcacactctgcc
tattgtctagttgtctctttttgttcccatctgctgcagagagaagatga
tctgaaggtggctgattgagacactatgactataacacaatggcatttat
gagtctttttattgcgctattcctttgacagaacactagtgtttggtttc
cccctatgttccctgtctatctagcttcatgtccttggccaccaagccgt
gttggataaggctccatctcgtggagtggaccttatttccatcatcagtt
ggttccttgcacaagctttgtgccactactgcaccagcatttttgtagcc
aagtccctcttgcagccgagtcagtgtctaccttgttctgtggtagaagc
aaggcacctcctcccatatcatattcctaaattctctgagcacttacatc
ttatttcccttttcaagctaatctt
gaattccacggactgttggactcctctatatgccccttctccaactgttg
ctttactaattcttcaatagcctgtattttttctctagtcaggggccact
gattaatccacacaggctctgagtctttccattctattttgtcagcatat
aaattttcatcagtgacccctatgaaaaatcctgccagtttaaattgtca
gaagtaaccagtttaacatttattccttccataatatctcttccccaaag
tgagaaaggtagggaagctataacgtaaggttttatatgccctgtttttc
cctcacacttccatcttaatatttgtgagctttgggccacattagcagcc
attcccaaaccttgaagggtagaggaagtccggtggactggccaggatga
aggccaatctttaccagcaatacaggatctgtcagcgccagtatccaaaa
ggcccttaaacgactttccatttataatgatattcttgaaaggcctctga
tcattgatttcctgtacccaagctacagcgtctgtagatccaaattgtcc
cctgcctcgcactccttttaaagtaggatttgggagctgtaaataaggta
ataacaggagctgagctatcctttgacctttatgaagctgaactgtttcc
tttcaatgctttaaccataactttaatttcacctagagtgtcagaatcta
ccactccagggaccacctcgaagcttttcttaaaattcgagctacgtcct
atgatgagaccaacagtccctggaggcaaagtaccagacactgaagtgga
aatgaggtgcacgccatcccaactagaaattataacgtcagttaaagttg
caagatctagtcctgtgctccctggggtggctctagggtaaatgatgata
gtaaactccggggctctgggtcagaggagcggtctctacctcctcttgac
tctggtgcctctttttttcgggctgagaagcagccctcatctagttttgc
ctggtccgcttctctagtggcggaatccatccttgtgaacttgatcacac
ctcatttccaaggtttccttggccaactgcattccgaggaatgttcactt
ccgagatttcaacttccaggccggttcactgaacgtatcgtcagtgagtt
tatataggccgatactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129613507_129614641
seq2: B6Ng01-159L13.b_48_1172

seq1  GAATTCTTTGTTTAGCTCTGTGCCCCATTTTTTAATGGGGTTATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTGCCCCATTTTTTAATGGGGTTATTTGGTT  50

seq1  TTCTGGAGTCCATCTTCTTGAGTTCTTTATTTATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCATCTTCTTGAGTTCTTTATTTATATTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATTGGTAAAGATCCTTTCCCAATTTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATTGGTAAAGATCCTTTCCCAATTTGTTGGTGGCCT  150

seq1  TTTTGTCTTATTGACAGTGTCTGTTGCCTTATAGAAGCTTTGCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGACAGTGTCTGTTGCCTTATAGAAGCTTTGCAATTTTA  200

seq1  TGAGGTCCCGTTTGTCAACTCTCGATCTTACAGCATAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCGTTTGTCAACTCTCGATCTTACAGCATAAGCCATTGCTGTT  250

seq1  CTATTCAGGATTTTTTCTCCTGTGCCCATATCTTCAAGGCTTTCCTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGATTTTTTCTCCTGTGCCCATATCTTCAAGGCTTTCCTCCAC  300

seq1  TTTCTCCTCTCTAAGTTTCAGTGTCTCTGGTTTATAGTGTTTTTCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTCTAAGTTTCAGTGTCTCTGGTTTATAGTGTTTTTCTTTTT  350

seq1  TCCCTCAGTATGACTCCCTTGGAGAAAATGTTTTTATTTGCCAGGGGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGTATGACTCCCTTGGAGAAAATGTTTTTATTTGCCAGGGGCAA  400

seq1  ATAAATCTGGAGACAACCTCTGGGTTAGAAATGGAGACATGTCCTTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTGGAGACAACCTCTGGGTTAGAAATGGAGACATGTCCTTACTT  450

seq1  CATCCTCTAGGTCTAGGACTCCATCTGTGTCAGATCTGTGCAGGCCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTAGGTCTAGGACTCCATCTGTGTCAGATCTGTGCAGGCCCAGC  500

seq1  CATGTCACCACAGTCTAAGTCCAAATGTACTCAAGCCCTGTTTTGTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCACCACAGTCTAAGTCCAAATGTACTCAAGCCCTGTTTTGTTTCC  550

seq1  AAGGCCTTGATTACTGATGTCCTCCATTTCTTTCTGGCTCTTACACTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTGATTACTGATGTCCTCCATTTCTTTCTGGCTCTTACACTCTT  600

seq1  TCTGTCTGCTTTTCCTCAGTGTTCCCTGAGCCCAGAGGGGAGGGATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGCTTTTCCTCAGTGTTCCCTGAGCCCAGAGGGGAGGGATTTCA  650

seq1  TGGAGACATCCATTTTAAGGTACATGTTCTACGATCTCTCACACTCTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACATCCATTTTAAGGTACATGTTCTACGATCTCTCACACTCTGCC  700

seq1  TATTGTCTAGTTGTCTCTTTTTGTTCCCATCTGCTGCAGAGAGAAGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTAGTTGTCTCTTTTTGTTCCCATCTGCTGCAGAGAGAAGATGA  750

seq1  TCTGAAGGTGGCTGATTGAGACACTATGACTATAACACAATGGCATTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGTGGCTGATTGAGACACTATGACTATAACACAATGGCATTTAT  800

seq1  GAGTCTTTTTATTGCGCTATTCCTTTGACAGAACACTAGTGTTTGGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTTTATTGCGCTATTCCTTTGACAGAACACTAGTGTTTGGTTTC  850

seq1  CCCCTATGTTCCCTGTCTATCTAGCTTCATGTCCTTGGCCACCAAGCCGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATGTTCCCTGTCTATCTAGCTTCATGTCCTTGGCCACCAAGCCGT  900

seq1  GTTGGATAAGGGCTCCATCTCGTGGAGTGGACCTTATTTCCAATCATCAG  950
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  GTTGGATAA-GGCTCCATCTCGTGGAGTGGACCTTATTTCC-ATCATCAG  948

seq1  TTGGTTCCTTGCACAAGCTTTGTGCCACTACTGCACCAGCATATCTTGTA  1000
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  TTGGTTCCTTGCACAAGCTTTGTGCCACTACTGCACCAGCAT-TTTTGTA  997

seq1  GCCAAGTCACTCTTGCAGCCGAGTCAGTGCCTACCTTTGTCCTGTGGTAG  1050
      |||||||| |||||||||||||||||||| ||||| |||| |||||||||
seq2  GCCAAGTCCCTCTTGCAGCCGAGTCAGTGTCTACC-TTGTTCTGTGGTAG  1046

seq1  AAGGCAGGGCACCTCCTCTCATATCATATTTTTCTTAAAATTCTTGAAGC  1100
      || ||| ||||||||||| |||||||||||  |    |||||||   |||
seq2  AA-GCAAGGCACCTCCTCCCATATCATATTCCT----AAATTCTCTGAGC  1091

seq1  ACTTACATCTTATTTCACTTTCAAAGCTAAATCTT  1135
      |||||||||||||||| ||||  ||||| ||||||
seq2  ACTTACATCTTATTTCCCTTTTCAAGCT-AATCTT  1125