BAC Information

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BAC

Clone NameB6Ng01-159M20
Chromosome6 (Build37)
Map Location 18,835,427 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159M20.bB6Ng01-159M20.g
ACCDH953357DH953358
length9581,158
definitionDH953357|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M20, 5' end.DH953358|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcaattctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatgttagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgtcggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagttttagtgtctctggttttatgtgaagttcctcga
tccacttagatttgaccttagtgcaaggagataagtatggatcgattcac
attcttctacacgacaacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccattggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgtttttccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggaaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttccttcttcagtgatttgagttttatcataca
gatctttcacttccttagtagagtcacgccgagatattttatattatttg
tgactatt

gaattctcacctgaggaataccgaatggcagaaaaaatgctcagcatcat
taatcatcagggaaatgcaaatcaaaacaaccttgagattccatctcaca
ccagtcagcatggctaagatcaaaaattcatgtgacagcagatgctggcg
aggatgtggagaaagaggaacactcctccattgttggtgggattgccagc
ttgtacaaccactctggaaatcagtctggcggttcctcagaaaattggac
atagtactactggaggatcctgcaatacctctcctgggcatatatccaga
agattttccaacgagtaagaaagacacatgctccactatgttcatagcag
ccttgtttataatatccagaagctggaaagaacccagatgtctctcaaca
gaggaatggatacaaaaaatgtggtacatttacacaatggagtactactt
agctattaaaaagaatgaatttattgaattcctaggcaaatggatggacc
tggaggaaatcatcctgagtgaggcaacccaatcacaaaagaactcacat
gatatgtactcactgataagtggatattagcccagaaacttaggataccc
aagatacaagatacaatttatgaaacacatgaaactcaagaatgaagacc
aaagtgtggacactttgccccttcttagaattgggaagaaaacacccatg
gaaggagttacagagacaaagtttggagcagagacaaaaggatggaccat
ctagagactgccatatccagggatccatcccataatcagcctccaaacgc
tgacaccattgcaaacactagcaagattttgctgaaaggaccctgatata
gctgtctcttgtgagactatgccggggcctagcaaacacagaagtggatg
ctcacagtcagctattggatggatcacaggccccaatggaggagctagag
aaagtacccaaggagctaaaggatctgcatcctataggtggaacaacaat
atgactaccagtaccccgagtcttgtctctagctgcatatgtatctaaag
aatggcctaatccgccatcatggaagagaagccattggtcggtcaacttt
attgcctcattacaaggaatgtccggagctaaaaactgataatgagtgta
gagaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835427_18835968
seq2: B6Ng01-159M20.b_47_589 (reverse)

seq1  AATAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGAT  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGAT  50

seq1  CTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCA  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCGACAAGGGAGCTAAAACCATCCAATGGAAGAAAGACAGCATTTTCA  100

seq1  ACAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAGAATGTGAATC  150
      |||||||||||||||||||||||||||| || ||||||||||||||||||
seq2  ACAATTGGTGCTGGCACAACTGGTTGTTGTCGTGTAGAAGAATGTGAATC  150

seq1  GATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGA  200
      ||||||||||||||||| || |||||||||||||||||||||||| ||||
seq2  GATCCATACTTATCTCCTTGCACTAAGGTCAAATCTAAGTGGATCGAGGA  200

seq1  ACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACTTCACATAAAACCAGAGACACTAAAACTTATAGAGGAGAAAGTGGGGA  250

seq1  AAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCA  300
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  AAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCA  300

seq1  ATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAACT  349
      ||||| |||||||| || | ||| || |||||||||||||||||||||||
seq2  ATGGCTTGTGCTGTAAGATCGAGGATTGACAAATGGGACCTAATGAAACT  350

seq1  CCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCAC  399
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCAAAGTTTCTGCAAGGCAAAAGACACCGACAATAAGACAAAAAGACCAC  400

seq1  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  450

seq1  ATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA  499
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA  500

seq1  TAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  542
      |||||||||||| ||||||||||||||| ||||||||||||||
seq2  TAACCCCATTAAAAAATGGGGCTCAGAATTGAACAAAGAATTC  543


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