BAC Information

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BAC

Clone NameB6Ng01-160G18
Chromosome6 (Build37)
Map Location 19,316,724 - 19,518,505
singlet/doubletdoublet
Overlap genenone
Upstream geneCttnbp2, EG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160G18.bB6Ng01-160G18.g
ACCDH953799DH953800
length1,1291,042
definitionDH953799|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G18, 5' end.DH953800|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,517,351 - 19,518,505)(19,316,724 - 19,317,775)
sequence
gaattcttttctatcggttttggtgcattgtttaaccagtcaaattgagt
cttttgcaagctaccaccttggtttaataaactgttttacttgatccatg
ttagtatatggactggcagtttgagagaaaagaagcatatatcataagag
agtattgagtggaactgcaaaaaaaaacttacattaaaaaaattataata
cacactctttggctttcatttggatctgaaccacatgtgttcttactaca
tatataggttatatgattgattttctgtgaaaatttgaaatctcataaga
gtagagcaaagaaaatagtttctgttgtttgaacacccaaagaggagaaa
actcatgtctctttttctttgtctgtataagttagctttctatcagtctt
caaaacatgatctaatccaaacttgaaaatcaatgattattttgggacac
agtttcaaatgtttcatttcatgcccctgttaatttggacccaaaataag
tcataataagattgcatggcagagtaagctgcctacttgattatcagtag
ggaatgaagagaaaaatgaaactgcataatccctttaagggcatgtcccc
ggtgatccaaaacatcctaccagcttcaatttgttaaagatctaccttgt
aataggaatattctggcaactaagacttcaataaattggccttgggaata
ttgaaggtttagggtaaagtgctacattgtttgtttttctgattggctaa
tattgttttgatgtgagtgtgttataaatgtgaatatatatataacatac
acatacacccacagacacgcgcacaattttcttcatctaatcttcatgat
ggctgcatttactcattacctctgatgtgtagattgacctttataacaat
catgctagtattgcctgctttctctataagacttagatttaaatccttta
ctcccttgtagctgtttagttaacagtcttgaaagataagaatatattaa
tgataatgatttctcgtttttcttttaccctcataatgcctactttctag
aagattaaatcagccttcttaggaaagattagtttggatcttagagccat
agccatgtaaatatctctatgcactgtgt
gaattcacttagttttataactcttagccgtgtactggaactgtctgtta
tttggatcacttagtaatgtttaggggaaaagaatctatccttttaaatg
ggactttaaatgggattaattttaatctactttatatggaacaaggcaag
ggattgagctttagctcatgtgaggcttacctttgacatgttaggtacaa
tttttatatttctatcttttaaacagatgttagtctcgttatctttaagt
acttcaaaaattgcccataacttaaggataacaggttgcttttagtcaac
cataaattattagatgatattaacaaatacccatttctagctgcttatag
attcaggcctaagttcctttttaagaattatctttaagctttttttttac
agacctcttgttttgccctccaacagttcctcattccattctttctcccc
tgtctccaagaggatgtccccacacccccacatacccccaaatcctgcca
ggcttctctattccctggggcctcaaatctctcaagaattcagtgcatct
tctctcactgagactagaccaggcagtcctctgctgtacatatgttggga
agcctggatttttaatttttattttattttttattaatcattccatttgt
ttacatctcaaatgatatcccccttcctagtgatcgctccacaactccct
attttatccaccttctcccctattccttttgccactatgaaggcgctccc
ctacccactcctgccgcaccgcaggcaccgcacactggggcatcaaacct
ccgtaggatcaaagggctgccttctcactgatgtcccacaggccatcctc
tgctatatatgtatctggcaccatggatctctccctgtacactcattggt
tggttgtctagtcctggcaagctctgggtggtctggccaccctacatgtt
ctctgtgtggttgcatttcccctccactcctcagtccttcttcaatcacc
actggggtcccagtgtcctagtctgatgttgcttgaacatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19517351_19518505
seq2: B6Ng01-160G18.b_45_1173 (reverse)

seq1  ACACATGTGCATAGGAGATAATTTCCAATGGCTTATGCTCTAAGATCAAA  50
      ||||| ||||||| |||||| || |  ||||||   ||||||||||| ||
seq2  ACACA-GTGCATA-GAGATATTTAC--ATGGCTATGGCTCTAAGATCCAA  46

seq1  TACTAATCTTTCCT-AGAAGGCTGATTTTAATCTTTCTTAGAAAGTAGGC  99
       ||||||||||||| |||||||||| |||||||||   ||||||||||||
seq2  -ACTAATCTTTCCTAAGAAGGCTGA-TTTAATCTT--CTAGAAAGTAGGC  92

seq1  ATTAATGAGGGGTAAAAGAAAAAACGAAGAAAACCATTATCATTAATATA  149
      ||| |||| ||||||||| ||||||||   ||| ||||||||||||||||
seq2  ATT-ATGA-GGGTAAAAG-AAAAACGA--GAAATCATTATCATTAATATA  137

seq1  TCTTAATCTCTCAAGACCTTGTTTAACTAAAACAAGCTAACAAGGGAAGT  199
      |  | |||| |||||||  || |||||||||   |||| ||||||| |||
seq2  TTCTTATCTTTCAAGAC--TG-TTAACTAAA--CAGCT-ACAAGGG-AGT  180

seq1  AAAGGATTTAAATCTTAAGTCTTTATAGAGGAAAGCAGGCAATTACTAGC  249
      |||||||||||||| |||||| ||||||| |||||||||||| |||||||
seq2  AAAGGATTTAAATC-TAAGTC-TTATAGA-GAAAGCAGGCAA-TACTAGC  226

seq1  ATGATTGTTATAAAGGTCAATCTAACACATCAAGAGGTAATGAGTAAATG  299
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  ATGATTGTTATAAAGGTCAATCT-ACACATC-AGAGGTAATGAGTAAATG  274

seq1  CAGCCATCATGAAGATTAGATGAAGAAAAATTGTGCGCGTGTCTGTGGGT  349
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGCCATCATGAAGATTAGATGAAG-AAAATTGTGCGCGTGTCTGTGGGT  323

seq1  GTATGTGTATGTTATATATATATTCACATTTATAACACACTCACATCAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTATGTTATATATATATTCACATTTATAACACACTCACATCAAA  373

seq1  ACAATATTAGCCAATCAGAAAAACAAACAATGTAGCACTTTACCCTAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTAGCCAATCAGAAAAACAAACAATGTAGCACTTTACCCTAAAC  423

seq1  CTTCAATATTCCCAAGGCCAATTTATTGAAGTCTTAGTTGCCAGAATATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATATTCCCAAGGCCAATTTATTGAAGTCTTAGTTGCCAGAATATT  473

seq1  CCTATTACAAGGTAGATCTTTAACAAATTGAAGCTGGTAGGATGTTTTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTACAAGGTAGATCTTTAACAAATTGAAGCTGGTAGGATGTTTTGG  523

seq1  ATCACCGGGGACATGCCCTTAAAGGGATTATGCAGTTTCATTTTTCTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCGGGGACATGCCCTTAAAGGGATTATGCAGTTTCATTTTTCTCTT  573

seq1  CATTCCCTACTGATAATCAAGTAGGCAGCTTACTCTGCCATGCAATCTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCTACTGATAATCAAGTAGGCAGCTTACTCTGCCATGCAATCTTA  623

seq1  TTATGACTTATTTTGGGTCCAAATTAACAGGGGCATGAAATGAAACATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTTATTTTGGGTCCAAATTAACAGGGGCATGAAATGAAACATTT  673

seq1  GAAACTGTGTCCCAAAATAATCATTGATTTTCAAGTTTGGATTAGATCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTGTCCCAAAATAATCATTGATTTTCAAGTTTGGATTAGATCAT  723

seq1  GTTTTGAAGACTGATAGAAAGCTAACTTATACAGACAAAGAAAAAGAGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAGACTGATAGAAAGCTAACTTATACAGACAAAGAAAAAGAGAC  773

seq1  ATGAGTTTTCTCCTCTTTGGGTGTTCAAACAACAGAAACTATTTTCTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTTCTCCTCTTTGGGTGTTCAAACAACAGAAACTATTTTCTTTG  823

seq1  CTCTACTCTTATGAGATTTCAAATTTTCACAGAAAATCAATCATATAACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTCTTATGAGATTTCAAATTTTCACAGAAAATCAATCATATAACC  873

seq1  TATATATGTAGTAAGAACACATGTGGTTCAGATCCAAATGAAAGCCAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTAGTAAGAACACATGTGGTTCAGATCCAAATGAAAGCCAAAG  923

seq1  AGTGTGTATTATAATTTTTTTAATGTAAGTTTTTTTTTGCAGTTCCACTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTATTATAATTTTTTTAATGTAAGTTTTTTTTTGCAGTTCCACTC  973

seq1  AATACTCTCTTATGATATATGCTTCTTTTCTCTCAAACTGCCAGTCCATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCTCTTATGATATATGCTTCTTTTCTCTCAAACTGCCAGTCCATA  1023

seq1  TACTAACATGGATCAAGTAAAACAGTTTATTAAACCAAGGTGGTAGCTTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACATGGATCAAGTAAAACAGTTTATTAAACCAAGGTGGTAGCTTG  1073

seq1  CAAAAGACTCAATTTGACTGGTTAAACAATGCACCAAAACCGATAGAAAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACTCAATTTGACTGGTTAAACAATGCACCAAAACCGATAGAAAA  1123

seq1  GAATTC  1155
      ||||||
seq2  GAATTC  1129

seq1: chr6_19316724_19317775
seq2: B6Ng01-160G18.g_64_1105

seq1  GAATTCACTTAGTTTTATAACTCTTAGCCGTGTACTGGAACTGTCTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAGTTTTATAACTCTTAGCCGTGTACTGGAACTGTCTGTTA  50

seq1  TTTGGATCACTTAGTAATGTTTAGGGGAAAAGAATCTATCCTTTTAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATCACTTAGTAATGTTTAGGGGAAAAGAATCTATCCTTTTAAATG  100

seq1  GGACTTTAAATGGGATTAATTTTAATCTACTTTATATGGAACAAGGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTAAATGGGATTAATTTTAATCTACTTTATATGGAACAAGGCAAG  150

seq1  GGATTGAGCTTTAGCTCATGTGAGGCTTACCTTTGACATGTTAGGTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAGCTTTAGCTCATGTGAGGCTTACCTTTGACATGTTAGGTACAA  200

seq1  TTTTTATATTTCTATCTTTTAAACAGATGTTAGTCTCGTTATCTTTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATATTTCTATCTTTTAAACAGATGTTAGTCTCGTTATCTTTAAGT  250

seq1  ACTTCAAAAATTGCCCATAACTTAAGGATAACAGGTTGCTTTTAGTCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAAATTGCCCATAACTTAAGGATAACAGGTTGCTTTTAGTCAAC  300

seq1  CATAAATTATTAGATGATATTAACAAATACCCATTTCTAGCTGCTTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTATTAGATGATATTAACAAATACCCATTTCTAGCTGCTTATAG  350

seq1  ATTCAGGCCTAAGTTCCTTTTTAAGAATTATCTTTAAGCTTTTTTTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGCCTAAGTTCCTTTTTAAGAATTATCTTTAAGCTTTTTTTTTAC  400

seq1  AGACCTCTTGTTTTGCCCTCCAACAGTTCCTCATTCCATTCTTTCTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCTTGTTTTGCCCTCCAACAGTTCCTCATTCCATTCTTTCTCCCC  450

seq1  TGTCTCCAAGAGGATGTCCCCACACCCCCACATACCCCCAAATCCTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAAGAGGATGTCCCCACACCCCCACATACCCCCAAATCCTGCCA  500

seq1  GGCTTCTCTATTCCCTGGGGCCTCAAATCTCTCAAGAATTCAGTGCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTCTATTCCCTGGGGCCTCAAATCTCTCAAGAATTCAGTGCATCT  550

seq1  TCTCTCACTGAGACTAGACCAGGCAGTCCTCTGCTGTACATATGTTGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACTGAGACTAGACCAGGCAGTCCTCTGCTGTACATATGTTGGGA  600

seq1  AGCCTGGATTTTTAATTTTTATTTTATTTTTTATTAATCATTCCATTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGATTTTTAATTTTTATTTTATTTTTTATTAATCATTCCATTTGT  650

seq1  TTACATCTCAAATGATATCCCCCTTCCTAGTGATCGCTCCACAACTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTCAAATGATATCCCCCTTCCTAGTGATCGCTCCACAACTCCCT  700

seq1  ATTTTATCCACCTTCTCCCCTATTCCTTTTGCCACTATGAAGGCGCTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCCACCTTCTCCCCTATTCCTTTTGCCACTATGAAGGCGCTCCC  750

seq1  CTACCCACTCCTGCCGCACCGCAGGCACCGCACACTGGGGCATCAAACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACTCCTGCCGCACCGCAGGCACCGCACACTGGGGCATCAAACCT  800

seq1  CCGTAGGATCAAAGGCCTGCCTTCTCACTGATGTCCAACAAGGCCATCCT  850
      ||||||||||||||| |||||||||||||||||||| || ||||||||||
seq2  CCGTAGGATCAAAGGGCTGCCTTCTCACTGATGTCCCAC-AGGCCATCCT  849

seq1  CTGCTATATATGTATCTGGCACCATGGATCTCTCCCTGTACACTCATTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATATATGTATCTGGCACCATGGATCTCTCCCTGTACACTCATTGG  899

seq1  TTGGTTGTCTAGTCCTTGCAAGCTCTGGGTGGTCTGGCCACCCTACATTG  950
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  TTGGTTGTCTAGTCCTGGCAAGCTCTGGGTGGTCTGGCCACCCTACA-TG  948

seq1  TTCTTCCTGTGTGGTTGCATTTCCCCTCCACTCCTCCAGTCCTTTCTTCA  1000
      ||||  ||||||||||||||||||||||||||||| |||||| |||||||
seq2  TTCT--CTGTGTGGTTGCATTTCCCCTCCACTCCT-CAGTCC-TTCTTCA  994

seq1  ATTCCACCACTGGGGTCCCAGTG-CTCAGTCTGATAGTTGGCTGTGAACA  1049
      ||  ||||||||||||||||||| |  |||||||| ||| ||| ||||||
seq2  AT--CACCACTGGGGTCCCAGTGTCCTAGTCTGAT-GTT-GCT-TGAACA  1039

seq1  TCC  1052
      |||
seq2  TCC  1042