BAC Information

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BAC

Clone NameB6Ng01-161C01
Chromosome6 (Build37)
Map Location 67,062,646 - 67,243,494
singlet/doubletdoublet
Overlap geneEG667310, LOC667318, Serbp1, Il12rb2
Upstream geneLOC100041916, Tpm3-rs3, LOC627751, Mad2l1, V1rc15, LOC100041941, Aurkb-ps, V1rc14, LOC546901, V1rc12, LOC627833, V1rc11, V1rc10, LOC100042816, LOC546902, V1rc13, EG546903, LOC100042008, 4930597O21Rik, Gng12, LOC100042837, Gadd45a, E230016M11Rik
Downstream geneLOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igk, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161C01.bB6Ng01-161C01.g
ACCDH954327DH954328
length536904
definitionDH954327|Mus musculus domesticus DNA, BAC clone: B6Ng01-161C01, 5' end.DH954328|Mus musculus domesticus DNA, BAC clone: B6Ng01-161C01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,242,953 - 67,243,494)(67,062,646 - 67,063,547)
sequence
actctgtagaccaggctgtagaaatctgcctgcctctctctgcctcccaa
gtgctgggattaaaaggcgtgcgccaccatacctggctttcaagtgatct
ttcctaattgccaaatctgacatgtttccttacctgaaaccatggaagtc
caaagtccaagccccttagcatatccccaaagtacgatgaagatgttatg
atgcctttaatcacatttttaatcctagtacacaggaggtagagatccaa
gctagccagggctacatagcggtctttaataaaagtgcttcgtgagtagc
ctttcccatttctaaatccttttttcttttctagtactaacagggctagg
ggtgtgatccagtgagtgtaaagcatatgccttatcctacacaaactgag
tttgattctcaacaaaagggtaatgggcaacaaactagaaggcttagttc
accaatttccctcgacctccaatactccatccttctctccagactgccct
aagttttttctttctgcctttcctactaggaggggg
gaattctttttttgtttggtttggtttggtttttgtcgagacagggtttc
tctgtgtagctctggctgtcctggaactcactctgtagaccaggctggcc
tcgaactcagaaatccacctgcctctgcctcccgagtgtgtgcaccacca
ctccctggctagccctggaattctttgagtggaggagaaactaacacaag
ctcttctcagggtcactgccaggaggataaggtggggacctcatctcctc
ttctcccacactggttgatctctgtgtgcagagggttaaggagacacgaa
caaagcctggcagttaaatgggcaggtgatggcacaagaggaccaaggtt
caaatcctggctcctccatttccaggggaggacaatttagctgaaactgt
gcatatgaggccccacttctttatttgcccaaatgggggcggcacctgta
atgcttaaattgacttgggtgagtctacacaacccaagtatgagtacaca
tttgatggatactgccgttagttctgcctggcccgtaatgggtgctttaa
atactgggttggctcgaatgtctttcttcaacgcgtgcttgcttgccgct
tggtttgttacgggccagagaatgtgggtgctgcacatccaggatgtgtg
taaggatactgtccttacagagcttacagatgctgcatcacccagtgctt
cccttgaagcctggctttctcttagagggtgtcgagttgttcttttaaaa
agcatgctttgtggagcagctcagcatgtaatcccagagcttgggaggtg
ggagtaggaggatctggagttccagggcatcttctgcttatagccagttc
caggctagctaggggctacatttgaaatttcaccccttattcctcccctc
aaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_67242953_67243494
seq2: B6Ng01-161C01.b_49_590 (reverse)

seq1  CCCCCTCCTAGTAGGAAAGGCAGAAAGAAAAAACTTAGGGCAGTCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCTAGTAGGAAAGGCAGAAAGAAAAAACTTAGGGCAGTCTGGAG  50

seq1  AGAAGGATGGAGTATTGGAGGTCGAGGGAAATTGGTGAACTAAGCCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATGGAGTATTGGAGGTCGAGGGAAATTGGTGAACTAAGCCTTCT  100

seq1  AGTTTGTTGCCCATTACCCTTTTGTTGAGAATCAAACTCAGTTTGTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTGCCCATTACCCTTTTGTTGAGAATCAAACTCAGTTTGTGTAG  150

seq1  GATAAGGCATATGCTTTACACTCACTGGATCACACCCCTAGCCCTGTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGCATATGCTTTACACTCACTGGATCACACCCCTAGCCCTGTTAG  200

seq1  TACTAGAAAAGAAAAAAGGATTTAGAAATGGGAAAGGCTACTCACGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGAAAAGAAAAAAGGATTTAGAAATGGGAAAGGCTACTCACGAAGC  250

seq1  ACTTTTATTAAAGACCGCTATGTAGCCCTGGCTAGCTTGGATCTCTACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATTAAAGACCGCTATGTAGCCCTGGCTAGCTTGGATCTCTACCT  300

seq1  CCTGTGTACTAGGATTAAAAATGTGATTAAAGGCATCATAACATCTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTACTAGGATTAAAAATGTGATTAAAGGCATCATAACATCTTCAT  350

seq1  CGTACTTTGGGGATATGCTAAGGGGCTTGGACTTTGGACTTCCATGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTTTGGGGATATGCTAAGGGGCTTGGACTTTGGACTTCCATGGTTT  400

seq1  CAGGTAAGGAAACATGTCAGATTTGGCAATTAGGAAAGATCACTTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAGGAAACATGTCAGATTTGGCAATTAGGAAAGATCACTTGAAAG  450

seq1  CCAGGTATGGTGGCGCACGCCTTTTAATCCCAGCACTTGGGAGGCAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTATGGTGGCGCACGCCTTTTAATCCCAGCACTTGGGAGGCAGAGA  500

seq1  GAGGCAGGCAGATTTCTACAGCCTGGTCTACAGAGTGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGCAGATTTCTACAGCCTGGTCTACAGAGTGAATTC  542

seq1: chr6_67062646_67063547
seq2: B6Ng01-161C01.g_66_969

seq1  GAATTCTTTTTTTGTTTGGTTTGGTTTGGTTTTTGTCGAGACAGGGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTGTTTGGTTTGGTTTGGTTTTTGTCGAGACAGGGTTTC  50

seq1  TCTGTGTAGCTCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCTCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCC  100

seq1  TCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGTGTGCACCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGTGTGCACCACCA  150

seq1  CTCCCTGGCTAGCCCTGGAATTCTTTGAGTGGAGGAGAAACTAACACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGCTAGCCCTGGAATTCTTTGAGTGGAGGAGAAACTAACACAAG  200

seq1  CTCTTCTCAGGGTCACTGCCAGGAGGATAAGGTGGGGACCTCATCTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCAGGGTCACTGCCAGGAGGATAAGGTGGGGACCTCATCTCCTC  250

seq1  TTCTCCCACACTGGTTGATCTCTGTGTGCAGAGGGTTAAGGAGACACGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCACACTGGTTGATCTCTGTGTGCAGAGGGTTAAGGAGACACGAA  300

seq1  CAAAGCCTGGCAGTTAAATGGGCAGGTGATGGCACAAGAGGACCAAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTGGCAGTTAAATGGGCAGGTGATGGCACAAGAGGACCAAGGTT  350

seq1  CAAATCCTGGCTCCTCCATTTCCAGGGGAGGACAATTTAGCTGAAACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCTGGCTCCTCCATTTCCAGGGGAGGACAATTTAGCTGAAACTGT  400

seq1  GCATATGAGGCCCCACTTCTTTATTTGCCCAAATGGGGGCGGCACCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGAGGCCCCACTTCTTTATTTGCCCAAATGGGGGCGGCACCTGTA  450

seq1  ATGCTTAAATTGACTTGGGTGAGTCTACACAACCCAAGTATGAGTACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAAATTGACTTGGGTGAGTCTACACAACCCAAGTATGAGTACACA  500

seq1  TTTGATGGATACTGCCGTTAGTTCTGCCTGGCCCGTAATGGGTGCTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGATACTGCCGTTAGTTCTGCCTGGCCCGTAATGGGTGCTTTAA  550

seq1  ATACTGGGTTGGCTCGAATGTCTTTCTTCAACGCGTGCTTGCTTGCCGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGGTTGGCTCGAATGTCTTTCTTCAACGCGTGCTTGCTTGCCGCT  600

seq1  TGGTTTGTTACGGGCCAGAGAATGTGGGTGCTGCACATCCAGGATGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTTACGGGCCAGAGAATGTGGGTGCTGCACATCCAGGATGTGTG  650

seq1  TAAGGATACTGTCCTTACAGAGCTTACAGATGCTGCATCACCCAGTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATACTGTCCTTACAGAGCTTACAGATGCTGCATCACCCAGTGCTT  700

seq1  CCCTTGAAGCCTGGCTTTCTCTTAGAGGGTGTCGAGTTGTTCTTTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAAGCCTGGCTTTCTCTTAGAGGGTGTCGAGTTGTTCTTTTAAAA  750

seq1  AGCATGCTTTGTGGAGCAGCTCAGCATGTAATCCCAGAGCTTGGGAGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCTTTGTGGAGCAGCTCAGCATGTAATCCCAGAGCTTGGGAGGTG  800

seq1  GGAGTAGGAGGATCTGGAGTTCAAGGTCATCTTCTGCTTATAGCCAGTTC  850
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  GGAGTAGGAGGATCTGGAGTTCCAGGGCATCTTCTGCTTATAGCCAGTTC  850

seq1  CAGGCTAGC-AAGGGCTACA-TTGAAATTCCCACCCCTAACT-CACCCCT  897
      ||||||||| | |||||||| ||||||||  ||||||| | | | |||||
seq2  CAGGCTAGCTAGGGGCTACATTTGAAATT-TCACCCCTTATTCCTCCCCT  899

seq1  CAAAG  902
      |||||
seq2  CAAAG  904