BAC Information

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BAC

Clone NameB6Ng01-165F14
Chromosome6 (Build37)5 (Build37)
Map Location 47,505,735 - 47,506,242130,812,330 - 130,813,446
singlet/doubletsingletsinglet
Overlap geneEzh2
Upstream geneCntnap2, LOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1
Downstream geneRn4.5s, EG384379, Pdia4, LOC100041154, Zfp786, Zfp398, Zfp282, Zfp212, A230106D06Rik, AI894139, LOC623601, Zfp777, Zfp746, LOC665990, Krba1, Zfp467, Sspo, EG666005, Atp6v0e2, Lrrc61
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165F14.bB6Ng01-165F14.g
ACCDH957431DH957432
length5991,112
definitionDH957431|Mus musculus domesticus DNA, BAC clone: B6Ng01-165F14, 5' end.DH957432|Mus musculus domesticus DNA, BAC clone: B6Ng01-165F14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(47,505,735 - 47,506,242)(130,812,330 - 130,813,446)
sequence
gaattcaccaacttgcttctaatatgcaatgtagcctgtactgaagattt
ctatctcagtgggattccctagctctttcatggtaaacccacctattagc
taggccattgtgtttgggtgagactggctactgcctcaagtgagcactct
gcaaaccagccctgagctattctggcttggttcttttgtaatgcctagtt
agttttactgtctctaccaagctcctcagcttcaagcattttctaggaca
ttggaacaccggcaaaggcttagctatgtcagaattcaatcttaaaaggc
acttataataagataatactaaaagagagcacgtggatccatacaccaga
ctaacagacagggtatgaatatatgggttatgagaacgccaaagttccag
gaggtgagtttccgtgaaactctttgcctcgtgagtgctcccaggcctct
tggcctgccaagcaaacttcactggagtgtgtgtagcatccttgaatatg
tttattttttcctttccttttctttctttctttccttctttctttctctc
ttctccttccccaaaacaaaacaaaacaaaacaaaacaaaacaaaaaaa
gaattccttgtcaagccaggcgtggtggcacacacctttaatctcagcac
ttgggaggcagaggcaggaggatttctgagttcaaggccagtctggtcaa
cagagtgagttccaggacagccagggctacacagagaaaccctgtctcaa
aaaactaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaattccttgtcat
agatagtctcagaaagacaaaaggacctggggtcacaaagtagacatcca
gcataccagatacttacattacaattcattacaatagcaaaactacagtt
atgaagtagcaatgagaataagttcatggctgggggtcaccacaccagga
ggaactggattaaaggtcacagcagtaagaatgttgagaaccactgaatt
agaaccataaacctaatttttagtccagcctacattaaaaaaagaaatca
aagttgagtcagcacacgcacacacactcacaaaacacaataacccatat
gcaaggtaccttatcttcaatcccagaggcagactgcaaacttgggcact
gggagctatgctaacagtcttctaaaactgtaccctagtccagagtggaa
gaaaccacttgcgcacacagggccatgtgaagctaatgacaattctgact
cctcgtctgaggacaaaactggagggctacgctgctgcacacgacatgga
tgcacattaggctcaggtcactgtgacaaggcatctcagtcttgcgctgc
tcaggaacagaaatgaaggccaaagccaagttcctgcaagtctggtcttc
ctggctggcaagaatgtcgactccgcggctcaacacgggctctcttccct
gtgcacgggctattcagtgtctcctgtgaggatgcgaatccgaacagatc
aagtctgttcttcaggacttcaacaaagtcttaagaagcctcatcttaat
atagccgtgcttgcagaatagacacctacacaaatgatttggggtatgga
gaacgcaagtttcgtcagagtaaggtaatctgtgaatgaatgcctcaagg
acaaactgaacttctcagaacaatgctgagataaaagggagctcaaaaag
gtcaactgcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_47505735_47506242
seq2: B6Ng01-165F14.b_566_643 (reverse)

seq1  TTTTTTTGTTTTGTTTTGTTTTTGTTTTTTCAAGACAGGGTTTCTCTGTA  50
      |||||||||||||||||| |||||||||           ||||   ||| 
seq2  TTTTTTTGTTTTGTTTTG-TTTTGTTTT-----------GTTT---TGTT  35

seq1  TAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAAT  100
      |     |||       ||||        | |||  ||         ||| 
seq2  T-----TGG-------GGAA--------GGAGAAGAG--------AGAA-  56

seq1  TCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGC  150
        |||||                    ||  |   | |  ||||      
seq2  --AGAAA--------------------GAAGGAAAGAAAGAAAG------  78

seq1  GCCAACACCGCCCGGCTGGACTAAATAAACATCTCAACAGTTAGCAAGCC  200
                                                        
seq2  --------------------------------------------------  78

seq1  CCAATCAAATGCTTTCCTTTTTAAGAGCTGCCACTGTCATGGCAACAAGA  250
                                                        
seq2  --------------------------------------------------  78

seq1  AAACCCTCAGACCCTCAACTAAAGAGAATATACACATAGCTCACCTCTGT  300
                                                        
seq2  --------------------------------------------------  78

seq1  CACCATGCACTTTTCCATCATAATTTTTTATTAGTTCTTCAATGAAAGTG  350
                                                        
seq2  --------------------------------------------------  78

seq1  CCATCCTGATCCAGAACTTCATCCCCCATATAAGGAATGTTATGTAAAAC  400
                                                        
seq2  --------------------------------------------------  78

seq1  AGTTTCGTCTTCCACCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCG  450
                                                        
seq2  --------------------------------------------------  78

seq1  AGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAAAGAAGGAAAAAGAGAA  500
                                                        
seq2  --------------------------------------------------  78

seq1  AAAGAAAG  508
              
seq2  --------  78

seq1: chr5_130812330_130813446
seq2: B6Ng01-165F14.g_70_1181 (reverse)

seq1  AAAGCAGTTTGACTTTTCTGAGCTCCC-TTTATCTCAGC-TTGTCTTGAG  48
      ||||||| ||||| ||| ||||||||| ||||||||||| ||||  ||||
seq2  AAAGCAG-TTGACCTTTTTGAGCTCCCTTTTATCTCAGCATTGTTCTGAG  49

seq1  AAGTTCAGTTTGATCCTTGAGGCATTCATTTCAGAGTTACCCATACTCTG  98
      |||||||||||| ||||||||||||||| |||| || |  || |||||||
seq2  AAGTTCAGTTTG-TCCTTGAGGCATTCA-TTCACAGATTACCTTACTCTG  97

seq1  GATGGAACCTTGCGTTCTCCATACCCCAAATTAATTTGTGTTAGGTGTCT  148
          ||| |||||||||||||||||||||| | ||||||| |||||||||
seq2  --ACGAAACTTGCGTTCTCCATACCCCAAA-TCATTTGTG-TAGGTGTCT  143

seq1  AATCTGCAAGCACGACTATATTAAAGATGGGGCTTC-TAAGGATTGGTTG  197
      | |||||||||||| ||||||| |||||| |||||| ||||  || ||||
seq2  ATTCTGCAAGCACGGCTATATT-AAGATGAGGCTTCTTAAGACTTTGTTG  192

seq1  AAGTCCTG-AGAACAGGCCTGATCTGTTCGGATTCGCATCCTCACAGGAG  246
      |||||||| ||||||| | |||||||||||||||||||||||||||||||
seq2  AAGTCCTGAAGAACAGACTTGATCTGTTCGGATTCGCATCCTCACAGGAG  242

seq1  ACACTGAATAGCCCGTGCACAGGGAAGAGAGCCCGTGTTGAGCCGCGGAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAATAGCCCGTGCACAGGGAAGAGAGCCCGTGTTGAGCCGCGGAG  292

seq1  TCGACATTCTTTGCCAGCCAGGAAGACCAGACTTGCAGGAACTTGGCTTT  346
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCGACATTC-TTGCCAGCCAGGAAGACCAGACTTGCAGGAACTTGGCTTT  341

seq1  GGCCTTCATTTCTGTTCCTGAGCAGCGCAAGACTGAGATGCCTTGTCACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCATTTCTGTTCCTGAGCAGCGCAAGACTGAGATGCCTTGTCACA  391

seq1  GTGACCTGAGCCTAATGTGCATCCATGTCGTCTGCAGCAGCGTAGCCCTC  446
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGACCTGAGCCTAATGTGCATCCATGTCGTGTGCAGCAGCGTAGCCCTC  441

seq1  CAGTTTTGTCCTCAGACGAGGAGTCAGAATTGTCATTAGCTTCACATGGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGTCCTCAGACGAGGAGTCAGAATTGTCATTAGCTTCACATGGC  491

seq1  CCTGTGTGCGCAAGTGGTTTCTTCCACTCTGGACTAGGGTACAGTTTTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGCGCAAGTGGTTTCTTCCACTCTGGACTAGGGTACAGTTTTAG  541

seq1  AAGACTGTTAGCATAGCTCCCAGTGCCCAAGTTTGCAGTCTGCCTCTGGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTTAGCATAGCTCCCAGTGCCCAAGTTTGCAGTCTGCCTCTGGG  591

seq1  ATCGAAGATAAGGTACCTTGCATATGGGTTATTGTGTTTTGTGAGTGTGT  646
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGATAAGGTACCTTGCATATGGGTTATTGTGTTTTGTGAGTGTGT  641

seq1  GTGCGTGTGCTGACTCAACTCTGATTTCTTTTTTTAATGTAGGCTGGACT  696
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTGCGTGTGCTGACTCAACTTTGATTTCTTTTTTTAATGTAGGCTGGACT  691

seq1  AAAAATTAGGTTTATGGTTCTAATTCAGTGGTTCTCAACATTCTTACTGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAGGTTTATGGTTCTAATTCAGTGGTTCTCAACATTCTTACTGC  741

seq1  TGTGACCTTTAATCCAGTTCCTCCTGGTGTGGTGACCCCCAGCCATGAAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCTTTAATCCAGTTCCTCCTGGTGTGGTGACCCCCAGCCATGAAC  791

seq1  TTATTCTCATTGCTACTTCATAACTGTAGTTTTGCTATTGTAATGAATTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCATTGCTACTTCATAACTGTAGTTTTGCTATTGTAATGAATTG  841

seq1  TAATGTAAGTATCTGGTATGCTGGATGTCTACTTTGTGACCCCAGGTCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAAGTATCTGGTATGCTGGATGTCTACTTTGTGACCCCAGGTCCT  891

seq1  TTTGTCTTTCTGAGACTATCTATGACAAGGAATTCTTTTTTTTTTTTTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTCTGAGACTATCTATGACAAGGAATTCTTTTTTTTTTTTTTT  941

seq1  TTTTTTTTTTTTTTTAGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTAGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTG  991

seq1  GCTGTCCTGGAACTCACTCTGTTGACCAGACTGGCCTTGAACTCAGAAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAACTCACTCTGTTGACCAGACTGGCCTTGAACTCAGAAAT  1041

seq1  CCTCCTGCCTCTGCCTCCCAAGTGCTGAGATTAAAGGTGTGTGCCACCAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCCTCTGCCTCCCAAGTGCTGAGATTAAAGGTGTGTGCCACCAC  1091

seq1  GCCTGGCTTGACAAGGAATTC  1117
      |||||||||||||||||||||
seq2  GCCTGGCTTGACAAGGAATTC  1112