BAC Information

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BAC

Clone NameB6Ng01-166H01
Chromosome6 (Build37)
Map Location 109,117,400 - 109,118,400
singlet/doubletsinglet
Overlap genenone
Upstream geneSumf1, Itpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371
Downstream geneLOC639110, LOC100043720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166H01.bB6Ng01-166H01.g
ACCDH958223DH958224
length9671,146
definitionDH958223|Mus musculus domesticus DNA, BAC clone: B6Ng01-166H01, 5' end.DH958224|Mus musculus domesticus DNA, BAC clone: B6Ng01-166H01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccagataccttttaactaagaaaccaatgtgcataggaagtag
agaagagttgcatctttgccaattcctttaaatttgcaggatagttgaaa
gagatactgtctacacccagttatactgtcaatttgggttgccacagcat
aatatcacagactgagtttgcatagtgagaaactgacatgaagaatctgg
ctgggttccagaaacaagttctggcaaataaggctgagctctgctttttt
cttccaaggatgaacggatagattaaatggtgacacttacttggtgggag
tgcggctatacgcggtgttccaaagctcctctgatctacccccccccccc
cccgctactgctacaagtggactgtgagaaagagaggcagagatggcacc
aattgaaatacctgggaaccaaggcctagctacctttttttttttttctt
ttttatttccctcaaactaccttacattgtcacaagactttgtttccatt
tagaagccctctaagagttgatttattaattttcctctttgtcctcactg
ctcttagtgactttggagaccttccttcagtcatcccagaggttatcact
ttcaaaggtaaccagattgttgaaggtgtgggaagtacctttccataagg
accaggggtgtgaacaaaagttaggtgctgctccattgggttgatagttt
aaaaaccagtgttgttcttctgcactgttctgagccctgcccatctttat
ggacaaaactggtactgatagtgatggttccctaaggtcttctcttctcc
tcctcacttcttctatgagaaatatatttcatggacctttgtggctctta
cttgcaaagctgtcatcccattgaatcctttctgtttaatagactagctt
gttttgagatgtggcaaatagactggacttggtgattactgagctgggag
acagttgactggagtgt
gaattctcatctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcacatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttctacaaccactctggaaatcagtctggcggttcctca
gaaaattgaacatagtactaccggaggattcctcaatacctctcctgggc
atatatccagaaaatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaggtcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtacgcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtatggacactatgcccctccttagaaatgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aagtatggaccatgtagagactgccatatccagggatccaccccatattc
agcatccaaacgctgacaccattgcatacactagctagattttatcgaaa
ggacccagatgtagatgtctcttgtgagactatgccggggcctagaaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggttccaat
gagagctagagaagtacccaggagataaggatctgcaccctataggtgga
acaacatataaactacagtaccttgagctcttgactcttagctgcaatgt
atcaaagatgcctatcagccatcactgcaagagaggcccattgaaacgca
acttatatgccagtcggaaacgccaagtcaaaaaggcaatgctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109117400_109118400
seq2: B6Ng01-166H01.b_43_1009

seq1  GAATTCACCAGATACCTTTTAACTAAGAAACCAATGTGCATAGGAAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGATACCTTTTAACTAAGAAACCAATGTGCATAGGAAGTAG  50

seq1  AGAAGAGTTGCATCTTTGCCAATTCCTTTAAATTTGCAGGATAGTTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTTGCATCTTTGCCAATTCCTTTAAATTTGCAGGATAGTTGAAA  100

seq1  GAGATACTGTCTACACCCAGTTATACTGTCAATTTGGGTTGCCACAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACTGTCTACACCCAGTTATACTGTCAATTTGGGTTGCCACAGCAT  150

seq1  AATATCACAGACTGAGTTTGCATAGTGAGAAACTGACATGAAGAATCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACAGACTGAGTTTGCATAGTGAGAAACTGACATGAAGAATCTGG  200

seq1  CTGGGTTCCAGAAACAAGTTCTGGCAAATAAGGCTGAGCTCTGCTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCCAGAAACAAGTTCTGGCAAATAAGGCTGAGCTCTGCTTTTTT  250

seq1  CTTCCAAGGATGAACGGATAGATTAAATGGTGACACTTACTTGGTGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAGGATGAACGGATAGATTAAATGGTGACACTTACTTGGTGGGAG  300

seq1  TGCGGCTATACGCGGTGTTCCAAAGCTCCTCTGATCTA-CCCCCCCCCCC  349
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCGGCTATACGCGGTGTTCCAAAGCTCCTCTGATCTACCCCCCCCCCCC  350

seq1  CCCGCTACTGCTACAAGTGGACTGTGAGAAAGAGAGGCAGAGATGGCACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTACTGCTACAAGTGGACTGTGAGAAAGAGAGGCAGAGATGGCACC  400

seq1  AATTGAAATACCTGGGAACCAAGGCCTAGCTACCTTTTTTTTTTTTTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAATACCTGGGAACCAAGGCCTAGCTACCTTTTTTTTTTTTTCTT  450

seq1  TTTTATTTCCCTCAAACTACCTTACATTGTCACAAGACTTTGTTTCCATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCCCTCAAACTACCTTACATTGTCACAAGACTTTGTTTCCATT  500

seq1  TAGAAGCCCTCTAAGAGTTGATTTATTAATTTTCCTCTTTGTCCTCACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCCCTCTAAGAGTTGATTTATTAATTTTCCTCTTTGTCCTCACTG  550

seq1  CTCTTAGTGACTTTGGAGACCTTCCTTCAGTCATCCCAGAGGTTATCACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGTGACTTTGGAGACCTTCCTTCAGTCATCCCAGAGGTTATCACT  600

seq1  TTCAAAGGTAACCAGATTGTTGAAGGTGTGGGAAGTACCTTTCCATAAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGTAACCAGATTGTTGAAGGTGTGGGAAGTACCTTTCCATAAGG  650

seq1  ACCAGGGGTGTGAACAAAAGTTAGGTGCTGCTCCATTTGGTTGATAGTTT  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCAGGGGTGTGAACAAAAGTTAGGTGCTGCTCCATTGGGTTGATAGTTT  700

seq1  AAAAACCAGTGTTGTTCTTCTGCACTGTTCTGAGCCCTGCCCATCTTTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAGTGTTGTTCTTCTGCACTGTTCTGAGCCCTGCCCATCTTTAT  750

seq1  GGACAAAAACTGGTACTGATAGTGATGGTTCCCTAGGGTCCTTCTCCTTC  799
      |||| |||||||||||||||||||||||||||||| ||| ||||| ||||
seq2  GGAC-AAAACTGGTACTGATAGTGATGGTTCCCTAAGGT-CTTCT-CTTC  797

seq1  TCCTCCCTTCACTTCTTCTATGAGAATATA-ATTTCATTGGACCTTTGT-  847
      ||||||  |||||||||||||||||| ||| |||||| ||||||||||| 
seq2  TCCTCC--TCACTTCTTCTATGAGAA-ATATATTTCA-TGGACCTTTGTG  843

seq1  GCTCTATACTTGCCAAAGCTTGGTTCCAATCCCCCATTTTGAATCCCTTT  897
      ||||| |||||| |||||||  ||    |||||     |||||| |||||
seq2  GCTCT-TACTTG-CAAAGCT--GT---CATCCC----ATTGAAT-CCTTT  881

seq1  CTGTTTTAAATAGACTAGCTTTGGTTTTTGTAGATGTTGGCAAACATAGA  947
      ||||||  |||||||||||||  |||||   ||||| ||||||  |||||
seq2  CTGTTT--AATAGACTAGCTT--GTTTT--GAGATG-TGGCAA--ATAGA  922

seq1  CTTGAACCTGGGTGAATTTACTGAGCTGGGAGGAACCCAGTCTGACTGGA  997
      || ||  || |||||  |||||||||||||||     |||| ||||||||
seq2  CTGGA--CTTGGTGA--TTACTGAGCTGGGAG----ACAGT-TGACTGGA  963

seq1  GTGT  1001
      ||||
seq2  GTGT  967