BAC Information

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BAC

Clone NameB6Ng01-166I03
Chromosome6 (Build37)
Map Location 18,835,448 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166I03.bB6Ng01-166I03.g
ACCDH958270DH958271
length9281,230
definitionDH958270|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I03, 5' end.DH958271|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccagtttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtgcaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttattacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacctccttagttagagtc

gaattcaagaagttagactccatagaatcaaataactctaataaaatggg
gtacagagctaaagaaagtattttcaactaggaatattgaattgctgtga
agcacctaaagaaatgttcaacatccttagtcatgagggaaatgcaaatc
aaaacaaccctgagattccacctcacaccagtcagaatggctaagatcaa
aagctcagatgacagcagatgctggtgaggatgtggagaaagaggaacat
tcctccattgttgttggattgcaaacttttacaaccactctagaaaacag
tctggtggttcctcataacatcttaaaacttcccttaaatattagctact
tttctgtattgtaataaacactgtgactatggtaattaaagaatatatct
gggttcacagttccaaagggttagaatccatgatggcagagaagagtcag
gcagcaggcagcaagtaacaagcttgatgccttgaacagaaggttaaggc
tcttatcttgaactgcacagaagtagagtgtgaactgggaactgtgaaag
gcaagaacttttaaaccctaaaagcctaccacctgttacatacctctcca
acaaggccatacctcataagtctccctaaacagtgctaccaactagaaac
ctagtatttaaacatgcttgagtataacagagccatcctcattcaaacca
ctgcaccttatgatcaacacatttaattaataagtataatatacctagat
cttttcacttactactcatattgtttccagtgaaacatataaaaaatatg
tgataaaatagctgattcacagacttcgggtacaggcactaaaagcttct
tttaaagaagccaattactctgcctactgcagatggcttacataaaagtc
atatttatcacaattagcaagtcaacatccatatgtcattatcaaaatgt
tcaaagtcattgtcattcaaactttactaatattctcacgtctctctgtt
gcagtgtggtttccccacaccttgatttgatcatgtctgcttagtttcgt
attagctgtaagaaatacctagctctgtctttatgatgatcacttagtgt
aagaataccctggtcagtattttatcaggagtggccctccatgaactgtc
tgagctttttatgctacataggaatatgatggtagggagaagccggataa
ggtcatctcatcaccaaccaagtgggctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-166I03.b_42_563 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| || 
seq2  GGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGC  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| || |||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAACTGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522


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