BAC Information

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BAC

Clone NameB6Ng01-166M05
Chromosome6 (Build37)
Map Location 18,835,427 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166M05.bB6Ng01-166M05.g
ACCDH958448DH958449
length992249
definitionDH958448|Mus musculus domesticus DNA, BAC clone: B6Ng01-166M05, 5' end.DH958449|Mus musculus domesticus DNA, BAC clone: B6Ng01-166M05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatcttttacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagaaggtgttgtttccctaattctttctca
cactctgacaaaatgccctgatccctggggtatccctgtccctgggattc
cttgatcatgacaagcagctctgtgtgtgtgtgtgtgtattggggggggt
ggcccctgactcttctctggttgcttctgtggccaggggggacctgatcc
ccttattgtttgttctaaggataccatggaggctcaattgcttctttaac
agagtcatagacggtggtccagcaatttgaaaaagttattagtgtcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835427_18835968
seq2: B6Ng01-166M05.b_50_592 (reverse)

seq1  AATAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGAT  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGAT  50

seq1  CTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCA  100

seq1  ACAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAGAATGTGAATC  150
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  ACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATC  150

seq1  GATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGA  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGA  200

seq1  ACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  250

seq1  AAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCA  300
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  AAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCA  300

seq1  ATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAACT  349
      ||||| |||||||| || | |||||| |||||||||||||||||||||||
seq2  ATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACT  350

seq1  CCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCAC  400

seq1  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  450

seq1  ATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA  500

seq1  TAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  542
      |||||||||||| ||||||||||||||||||||||||||||||
seq2  TAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  543