BAC Information

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BAC

Clone NameB6Ng01-167B08
Chromosome6 (Build37)
Map Location 18,836,127 - 18,836,661
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167B08.bB6Ng01-167B08.g
ACCDH958676DH958677
length1,152942
definitionDH958676|Mus musculus domesticus DNA, BAC clone: B6Ng01-167B08, 5' end.DH958677|Mus musculus domesticus DNA, BAC clone: B6Ng01-167B08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattttgtaaatatgatgctatctgcttattcatttcactattt
ccaattgttgggttgtttttttttttccattttttattaggtatttcgct
catttacatttgcaatgctataccaaaagtcccccatagccacccacccc
ctctcccctacccacccactccccttttatggccctggcgttcccctgta
ctggggcatataaagtttgcgtgtccaatgggcctctctttccagtgatg
gccgactaggccatcttttgatgcatatgcagctagagtcaagagctccg
gggtactggttagttcataatgttgttccacctatagggttgcagatccc
attagcttctttggtactttctctagctccttcattgggggccatgtgat
ccatccaatagccgactgtgagcatccacttctatgtttgctaggcccag
gcatactctgacatgagacagctatatcagggtcctttcagcataatctt
gctagtgtatgcaatggtgtcagcatttggaagctgattatgggatggat
ccccggatatgctagtgtctacatggtccatccttttatctcagctccaa
actttgtctctgtaactccttccaagggtgttttgttcccacttctaagg
aggggcatagagttcacacttcagtcttcatttttcttgagtttcatgtg
tttaggaaattgtatcttatatcttgggtatcttaggttttgggctaata
tccacttatcagtgagtacatattgtgtgagttcctttgtgaatgtgtta
cctcactcagatgatgccctccaggtccatccatttggctaggaatttca
taaattcattctttttaatagctgagtagtactccattgtgtagatgtac
cacattttctgtatccattcctctgttgaggggcatctgggttcttccag
cttctggctatataaataagctgctatgacatagtggaccatgtgtcctt
cttacagttggggcatcttctggaatatgcccaggagaaggtatgctgat
cttcagtagtacttatattccagtttctgaggacgcgactgattcatagt
ggtttgtcaagctgcattccaccaacaatggaggaggttcctctttccac
at

gaattcaaaataaacctggatacaataaagctgatcgaagagaaaatagc
aaatagccttgaatgcactagtacaggacacgattttctgaacagaacac
caacatctcaggcacgaagatcaataattaataaatggaacctaataaaa
ctgataagcttctgtaacataaaggacactatcaaatgacaaaacagcag
cctactgaatgaaaatatcttcatgaaccccatatccaggagagggctta
tatccaaaacatttaaagaactcaagagactacagatcaatgaatcaaat
aaaccaattaagtaatggggtacagacataaacagaattctaaaaaaaga
ggagtctccaatggccaagaagcaatttaatttgacattttaaagaaaat
tgaaaatagttctacatcaaaacacagctatacaactgctgggaatatac
tcaaaaatgttgcaccataacaaagaactctctggctcaatgatgttcgt
agtttgtggctatattggtaatagcaaaaaactgggaacaacctagatgt
ctctcaaaagaataatgaataaagaaaatgcaccaaattcacacaataaa
atattactcagctattaaaaacagcaaatctatgaactttttcaggaaaa
ctgaaggaactagaaaatactaccctgagtgacataacccacacccagaa
agacaaacgtgatatgaacttacttataagtagatatcagacataaagta
caggacaaccatgccataattcatagacccaaagaagctaagtaacaaga
aggtctaaagggggacacttgaatctacctcactgagaaataagtagaat
tatcatggagatggagagaaggagggtaatgggtcagtaagagggtaggg
agcagaacaggaggatcaagtggggataagatggagggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18836127_18836661
seq2: B6Ng01-167B08.b_682_1197 (reverse)

seq1  ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTG  50
      |||||  ||||||||||| |||||||||||||||| ||| |||| |||||
seq2  ATGTG--GAAAGAGGAAC-CTCCTCCATTGTTGGT-GGAATGCA-GCTTG  45

seq1  TACAACCACTCTGGAAATCCGTCTGGCGGTTGCTCAGAAAATTGGACAT-  99
         ||||||| ||  |||| |||  |||  | |||||||| | | | || 
seq2  ACAAACCACTATG--AATCAGTC--GCG--TCCTCAGAAACTGGAATATA  89

seq1  AGTACTACTGGAGGATCCAGCATTACCTCTCCTGGGCATATATCCAGAAG  149
      ||||||||| || ||| ||||||  | |||||||||||||| ||||||||
seq2  AGTACTACT-GAAGAT-CAGCATACCTTCTCCTGGGCATAT-TCCAGAAG  136

seq1  ATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCC  199
      ||||||||||| |||||||||||||||| ||||||||| ||||||||| |
seq2  ATGCCCCAACT-GTAAGAAGGACACATGGTCCACTATG-TCATAGCAG-C  183

seq1  TTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGA  249
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  TTATTTAT-ATAGCCAGAAGCTGG-AAGAACCCAGATGCCCCTCAACAGA  231

seq1  GGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAG  299
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAG  281

seq1  CTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTG  331

seq1  GAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAA  399
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCATCAT-CTGAGTGAGGTAACACATTCACAAAGGAACTCACACAA  380

seq1  TATGTACTCACTGCTAATTGGATATTAGCCCCAAACCTAGGATACCCAAG  449
      ||||||||||||| ||| ||||||||||||| ||||||| ||||||||||
seq2  TATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAAGATACCCAAG  430

seq1  ATATAAGATATAATTTGCTAAACACATGAAACTCAAGAAGAATGAAGACT  499
      |||||||||| ||||| |||||||||||||||||||||| ||||||||||
seq2  ATATAAGATACAATTTCCTAAACACATGAAACTCAAGAAAAATGAAGACT  480

seq1  GAAGTGTGGACACTATGCCCCTCCTTAGAATTGGGA  535
      |||||||| || |||||||||||||||||| |||||
seq2  GAAGTGTGAACTCTATGCCCCTCCTTAGAAGTGGGA  516


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