BAC Information

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BAC

Clone NameB6Ng01-167F06
Chromosome6 (Build37)
Map Location 133,074,006 - 133,075,107
singlet/doubletsinglet
Overlap genenone
Upstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
Downstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167F06.bB6Ng01-167F06.g
ACCDH958856DH958857
length1,2711,151
definitionDH958856|Mus musculus domesticus DNA, BAC clone: B6Ng01-167F06, 5' end.DH958857|Mus musculus domesticus DNA, BAC clone: B6Ng01-167F06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagctcagggtccgcttcaaggacttttaggacattggaacac
tggggaaggcttagctatatgtcaaaatcaatccttaaaggtacttataa
taaaacaatactgaaagagagcacacagatccatacaccagactaactcg
aggacaggttttgagtatacgacctatgggaatgccaaggttccaggagg
ctaaatttccatgaaactctttgactcaggactgcttccaggtttctaaa
cctgtcaaacagacttcactggagtggatgtagcagatagcttctctatt
tgttttgagttctctatgtattctggacattaatctattatcagaagtat
agcttttaatgagtcccaccagtaagttttactttggattgattatttta
ttcgttgtacagatttttagtttcatgtgatcttgtttgtcaattgttaa
tcttaaatcctgtctcaatggagtcttattcacaaagttgtttgctatac
ttgtatattattcagtactgcctattttttttcttctagtagttgtatta
cttcagcattcacattatgatcactaacacttttggagttgagattctgt
gcaatgtggtgaatatggatctaacattcttctacatgtgagcatttaga
ttttctaggaccatttgttgaaggagctgtcttccctccattttgtaatt
tttggcatctttgtcaaatattacatgacatttatgtgtggcctccagtt
ttatttcattaatcacatgttcattgttgctaatactatgcattttaata
ctatagctctgaaatgtgacttgaaatccgattttataatctcttcagca
ttagattgtctctttggaatagctttgatgatccagagtgttttgagcta
atttatgaaattaaggatttatagataaatgtctgtagaatatcatgagt
atttgattaggcttaagcaaatgtttaaatcttgttaggatacaccagtt
gtacatcattattatatctaccacatcatggaattcattctatctttgta
tgcttcttaaatcccttttcttcagggattggaaatttcatcatagaaat
gtcacatctttggctatgtttctcaagatagagtttgaaggctgcttata
aatagaaccggttccaagttgcctttcacgtaatgtcattatcctggttg
aaaggtactgtcgggaagcaatacgcattactctagatgctaattccgtt
tcatgatgtatgactgctgat
gaattcaaacaggaactataaaggcaaaattcaacagcaaagtgcaagag
ataaaaaggagaatctcagacattgaagaaatagtcacattggtcaaata
aaaagttaaaaataaactcctgacacaaaactgtaagaaacattggatag
tatgaaaaattaaaatattagaataataaaactaaagggaagaaaagaaa
ctggggctgtagaaaaagaaattaatttgaacaaatccagagatatttgt
aacatcaataaggcaacttatacaaataaaaaggaatacagaagcttact
aaattggattggaataatattcaacttgcctaagaataatcacagcaata
aattgtcagatcaaaataatattaaaagctaaaaggggagactaaggaac
ataaaactgatcagaattacatttgcattctctttgaggactctaagagc
cagaagggcccagacatgtctccttcaatctcacaacacaaaacccaata
atgttggctataattcccaggtaaaatttcaatcatcaaatggagtaatg
agataattaacgataaaactaaatgtaagccaatgttgtactgccattga
aacaaacctctattatttaattttttgaccatgatcatccctactctctt
tctatcaaggtagggtaactttggctgtgtctttagggaaaggaatatct
aataattacttataatagaactgatgataatgatagttgacaactaatga
ataactgcagaaatagggtgatgattaaagctgagttagacattacctct
tgaaaaagaagcatagtcctcagagatgatcgctaggaacaggaaaaaaa
aaaaaaaagaaagaaagaaaaaacagggttgacgtgaaaagttaaatcct
aagttctcaagagctaacaataacctaagatgaatactacttccaccact
cgctaacaacctataactaagccttctgcaccctgagatgtgctagagag
attgtactttggaatggatcccaatatactatacatgtctactctagagc
atcatctggagctgtgatggcagtaagatggatcaaattatgtatccact
gcatacaagactctgtgattatcttgatcctctggaatcgaattactaca
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133074006_133075107
seq2: B6Ng01-167F06.g_151_1218

seq1  GTCACATTGGTCAAATAAAAAGTTAAAAATAAACTCCTGACACAAAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTGGTCAAATAAAAAGTTAAAAATAAACTCCTGACACAAAACTG  50

seq1  TAAGAAACATTGGATAGTATGAAAAATTAAAATATTAGAATAATAAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACATTGGATAGTATGAAAAATTAAAATATTAGAATAATAAAACT  100

seq1  AAAGGGAAGAAAAGAAACTGGGGCTGTAGAAAAAGAAATTAATTTGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAGAAAAGAAACTGGGGCTGTAGAAAAAGAAATTAATTTGAACA  150

seq1  AATCCAGAGATATTTGTAACATCAATAAGGCAACTTATACAAATAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGAGATATTTGTAACATCAATAAGGCAACTTATACAAATAAAAAG  200

seq1  GAATACAGAAGCTTACTAAATTGGATTGGAATAATATTCAACTTGCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGAAGCTTACTAAATTGGATTGGAATAATATTCAACTTGCCTAA  250

seq1  GAATAATCACAGCAATAAATTGTCAGATCAAAATAATATTAAAAGCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATCACAGCAATAAATTGTCAGATCAAAATAATATTAAAAGCTAAA  300

seq1  AGGGGAGACTAAGGAACATAAAACTGATCAGAATTACATTTGCATTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGACTAAGGAACATAAAACTGATCAGAATTACATTTGCATTCTCT  350

seq1  TTGAGGACTCTAAGAGCCAGAAGGGCCCAGACATGTCTCCTTCAATCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGACTCTAAGAGCCAGAAGGGCCCAGACATGTCTCCTTCAATCTCA  400

seq1  CAACACAAAACCCAATAATGTTGGCTATAATTCCCAGGTAAAATTTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAAAACCCAATAATGTTGGCTATAATTCCCAGGTAAAATTTCAAT  450

seq1  CATCAAATGGAGTAATGAGATAATTAACGATAAAACTAAATGTAAGCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATGGAGTAATGAGATAATTAACGATAAAACTAAATGTAAGCCAA  500

seq1  TGTTGTACTGCCATTGAAACAAACCTCTATTATTTAATTTTTTGACCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTACTGCCATTGAAACAAACCTCTATTATTTAATTTTTTGACCATG  550

seq1  ATCATCCCTACTCTCTTTCTATCAAGGTAGGGTAACTTTGGCTGTGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCCTACTCTCTTTCTATCAAGGTAGGGTAACTTTGGCTGTGTCTT  600

seq1  TAGGGAAAGGAATATCTAATAATTACTTATAATAGAACTGATGATAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAAGGAATATCTAATAATTACTTATAATAGAACTGATGATAATGA  650

seq1  TAGTTGACAACTAATGAATAACTGCAGAAATAGGGTGATGATTAAAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGACAACTAATGAATAACTGCAGAAATAGGGTGATGATTAAAGCTG  700

seq1  AGTTAGACATTACCTCTTGAAAAAGAAGCATAGTCCTCAGAGATGATCGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACATTACCTCTTGAAAAAGAAGCATAGTCCTCAGAGATGATCGC  750

seq1  TAGGAACAGGAAAAAAAAAAAAAAAGAAAGAAAGAAAAAACAGGGTTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACAGGAAAAAAAAAAAAAAAGAAAGAAAGAAAAAACAGGGTTGAC  800

seq1  GTGAAAAGTTAAATCCTAAGTTCTCAAGAGCTAACAATAACCTAAGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGAAAAGTTAAATCCTAAGTTCTCAAGAGCTAACAATAACCTAAGATG-  849

seq1  AATACTACTTCCAACCACTCGCTAACAACCTATAACTAAGCCTTCTTGCA  900
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  AATACTACTTCC-ACCACTCGCTAACAACCTATAACTAAGCCTTC-TGCA  897

seq1  CCCTGAGATTGTGCTAGAGAAGGAATTGTACCTTTTGGAATGGATCCCAA  950
      |||||||| |||||||||||    |||||||  |||||||||||||||||
seq2  CCCTGAGA-TGTGCTAGAGA---GATTGTAC--TTTGGAATGGATCCCAA  941

seq1  TATACTATTACATGTCTACTCTAGAAGCATCATTCTGGGAGCTGTGGATG  1000
      ||||||| |||||||||||||||| ||||||| ||| |||||||| ||||
seq2  TATACTA-TACATGTCTACTCTAG-AGCATCA-TCT-GGAGCTGT-GATG  986

seq1  GGAAAGTAAAGATGGATTCAAACATTATGTATCACCTGCATAACAAAGGA  1050
      |   ||| |||||||| ||||  ||||||||||  |||||| ||||  ||
seq2  G--CAGT-AAGATGGA-TCAA--ATTATGTATCCACTGCAT-ACAA--GA  1027

seq1  ACTTCTGGTGGTATTATCTTGATATCATCTATGATATCGAATTATACTAC  1100
         ||| |||  |||||||||||     || ||  |||||||  ||||||
seq2  --CTCT-GTG--ATTATCTTGAT----CCTCTGGAATCGAAT--TACTAC  1066

seq1  AG  1102
      ||
seq2  AG  1068