BAC Information

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BAC

Clone NameB6Ng01-167J19
Chromosome6 (Build37)3 (Build37)
Map Location 18,835,452 - 18,835,968115,521,040 - 115,522,191
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167J19.bB6Ng01-167J19.g
ACCDH959058DH959059
length9851,142
definitionDH959058|Mus musculus domesticus DNA, BAC clone: B6Ng01-167J19, 5' end.DH959059|Mus musculus domesticus DNA, BAC clone: B6Ng01-167J19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(115,521,040 - 115,522,191)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccctctt
ctgagatcttctttaatttctttcttcaggacttgaagtttttatcatac
agatctttcacttccttcgttagagtcacgccgagatattttatattatt
tgtggctattgagaaggtgtgtttccctatttctt
gaattcagtaaaacagactagaagtagaagtttaatgaacaatgaggtag
aagtattagccagcttaaaaattatatttaaaacgtcaaggctaccaatg
tacctcggtgtagaatacttggccagcatgtgtaaaacccagtgttttat
cctaaatgaacgcacacacgcgcacgcgcgcgcacacacacactatggat
tagttggaaagcagaatatattcagaactcgggtagttcaggaaggaagc
tggcaagcagtggtgagatgcatggtatggattatctccagcagcctaaa
cataacttaaggaaccaagtacagctaagcgaaaccagaaaaccaacgag
taatacagatggcatgaatttgaaccaagacttcggtaaagggcagtaga
gagaacagcaaaatggaggaagatctgcgagggtctgcatgcagacactg
agctacagggcagctggcacaagtcccgaggctttggacaggacagttag
actgaaaatgatgtattcaccgatactaggggaacagaaaacgtgccaga
catagaaagaagacgagtttacttttggacacattgaactgatccctctg
cggttaaatgaagcctgagcttccaggagtgcaggtgctgcagacttggg
tctctcaggagttaggaggtggagccgagagaaaggtaattatatcctag
agaactatacttcccacgtgaattaatgctgtctcatgggggggtaggtc
aggtctcacgggaaaggattacttcttcttcacaggcagtcgcttccctc
tcacttcccttccgtgttaccacagagccaggggtcctcttgagggcatc
ggagctgtgctatttagaccctttgctaccagagtcctggcaaataaagc
cccttagaagtcgtctagcatctgacattttgtttagcagaacaaactga
taaggcaaatcagtaggtccagaatgaaatttacatacatgaaaccaggc
acagagcaggtggttagtggaaacgtgtctaacctactgggtgggaaaca
tcatctctacgtctcaagaatgtgagctgctccttggcctgggtcccttg
gaatttcacacataatcatctaatggtccatccgggtatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-167J19.b_45_562 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| ||| |||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTACTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || ||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||| |||||||||||||||||||| |||| ||||||||||||
seq2  AGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr3_115521040_115522191
seq2: B6Ng01-167J19.g_66_1207

seq1  GAATTCAGTAAAACAGACTAGAAGTAGAAGTTTAATGAACAATGAGGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAAACAGACTAGAAGTAGAAGTTTAATGAACAATGAGGTAG  50

seq1  AAGTATTAGCCAGCTTAAAAATTATATTTAAAACGTCAAGGCTACCAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTAGCCAGCTTAAAAATTATATTTAAAACGTCAAGGCTACCAATG  100

seq1  TACCTCGGTGTAGAATACTTGGCCAGCATGTGTAAAACCCAGTGTTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCGGTGTAGAATACTTGGCCAGCATGTGTAAAACCCAGTGTTTTAT  150

seq1  CCTAAATGAACGCACACACGCGCACGCGCGCGCACACACACACTATGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGAACGCACACACGCGCACGCGCGCGCACACACACACTATGGAT  200

seq1  TAGTTGGAAAGCAGAATATATTCAGAACTCGGGTAGTTCAGGAAGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGAAAGCAGAATATATTCAGAACTCGGGTAGTTCAGGAAGGAAGC  250

seq1  TGGCAAGCAGTGGTGAGATGCATGGTATGGATTATCTCCAGCAGCCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGCAGTGGTGAGATGCATGGTATGGATTATCTCCAGCAGCCTAAA  300

seq1  CATAACTTAAGGAACCAAGTACAGCTAAGCGAAACCAGAAAACCAACGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTTAAGGAACCAAGTACAGCTAAGCGAAACCAGAAAACCAACGAG  350

seq1  TAATACAGATGGCATGAATTTGAACCAAGACTTCGGTAAAGGGCAGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAGATGGCATGAATTTGAACCAAGACTTCGGTAAAGGGCAGTAGA  400

seq1  GAGAACAGCAAAATGGAGGAAGATCTGCGAGGGTCTGCATGCAGACACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGCAAAATGGAGGAAGATCTGCGAGGGTCTGCATGCAGACACTG  450

seq1  AGCTACAGGGCAGCTGGCACAAGTCCCGAGGCTTTGGACAGGACAGTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGGGCAGCTGGCACAAGTCCCGAGGCTTTGGACAGGACAGTTAG  500

seq1  ACTGAAAATGATGTATTCACCGATACTAGGGGAACAGAAAACGTGCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAATGATGTATTCACCGATACTAGGGGAACAGAAAACGTGCCAGA  550

seq1  CATAGAAAGAAGACGAGTTTACTTTTGGACACATTGAACTGATCCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAAGAAGACGAGTTTACTTTTGGACACATTGAACTGATCCCTCTG  600

seq1  CGGTTAAATGAAGCCTGAGCTTCCAGGAGTGCAGGTGCTGCAGACTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTAAATGAAGCCTGAGCTTCCAGGAGTGCAGGTGCTGCAGACTTGGG  650

seq1  TCTCTCAGGAGTTAGGAGGTGGAGCCGAGAGAAAGGTAATTATATCCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGGAGTTAGGAGGTGGAGCCGAGAGAAAGGTAATTATATCCTAG  700

seq1  AGAACTATACTTCCCACGTGAATTAATGCTGTCTCATGGGGGGGTAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATACTTCCCACGTGAATTAATGCTGTCTCATGGGGGGGTAGGTC  750

seq1  AGGTCTCACGGGAAAGGATTACTTCTTCTTCACAGGCAGTCGCTTCCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCACGGGAAAGGATTACTTCTTCTTCACAGGCAGTCGCTTCCCTC  800

seq1  TCACTTCCCTTCCGTGTTACCACAGAGCCAGGGGTCCTCTTGAGGGCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCCTTCCGTGTTACCACAGAGCCAGGGGTCCTCTTGAGGGCATC  850

seq1  GGAGCTGTGCTATTTAGACCCTTTGCTACCAGAGTCCTGGCAAATAAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTGCTATTTAGACCCTTTGCTACCAGAGTCCTGGCAAATAAAGC  900

seq1  CCCTTAGAAGTCGTCTAGCATCTGACATTTTGTTTTAGCAGAACAAAACT  950
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  CCCTTAGAAGTCGTCTAGCATCTGACATTTTG-TTTAGCAGAAC-AAACT  948

seq1  GATAAGGCAAAATCAGTAGGTCCAGAATGAAATTTACATACATGAAAACC  1000
      |||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  GATAAGGC-AAATCAGTAGGTCCAGAATGAAATTTACATACATG-AAACC  996

seq1  AGGCACAGAGCAGGGTGGTTAGTGGAAACGTGTTCTAACCTACT-GGTGT  1049
      |||||||||||| ||||||||||||||||||| ||||||||||| |||| 
seq2  AGGCACAGAGCA-GGTGGTTAGTGGAAACGTG-TCTAACCTACTGGGTGG  1044

seq1  GAAACATCATCTCTACGTCTTCAAAGAATGTGAGCTGCTCCCTTGGCCTT  1099
      ||||||||||||||||||||   |||||||||||||||| ||||||||| 
seq2  GAAACATCATCTCTACGTCT--CAAGAATGTGAGCTGCT-CCTTGGCCTG  1091

seq1  GGTCCCTTGG-ATTTCACACATAATTCATTCATAAATGGT-CATCCGTGT  1147
      |||||||||| ||||||||||||| ||||     |||||| |||||| ||
seq2  GGTCCCTTGGAATTTCACACATAA-TCAT---CTAATGGTCCATCCGGGT  1137

seq1  ATTTT  1152
      |||||
seq2  ATTTT  1142