BAC Information

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BAC

Clone NameB6Ng01-167O02
Chromosome6 (Build37)2 (Build37)
Map Location 18,835,442 - 18,835,96818,618,061 - 18,619,181
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167O02.bB6Ng01-167O02.g
ACCDH959263DH959264
length1,0361,094
definitionDH959263|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O02, 5' end.DH959264|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(18,618,061 - 18,619,181)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtctggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatatatt
tgtgactatgagaaggtgtgtttccctaatttctttctcagctgtttatc
ttgtgtagagaaggccattgacttgtttgagtattt
gaattcaataacctccatatgggatgctaggttttaaaagtcaagtagaa
aaaatatttaaaactataaagtctgtattcatgaacaatgcccattagta
gaatttattatcctgttgaaacacattataggatgcctatttcatatctg
aacaagctagatggagtaaagaagttatctttgtttttatcagtcccccc
ccaaggccctttaaagttcaatgaagaaatataagataatgatcataatg
tacccataagtggaattgttggtaatttaaatataacatatagtgaagag
attactgtaactgaaaagaaagccattctatatttcctgacccatattct
tttttttaattggatatttttgttattacttttcaaatgttatccccttt
ccaggtccccccccccagcccctgccctatcctccctccccctgcttcta
tgagggtgttcctccactcacccaccactcccacctccccaccctcagtt
cccctacactggggcatccagcaagccttcataggactaaggacctctcc
tcccactgatgcctgacaaggccatcctctgcaatgtgtgcagctggagc
catgtgtactctttggtgatggcttagtccctggaagctcttgggggact
ggttggttggtattgttgttcttcttttggggttgcaatccccttcaatt
cctttggttctgacccattttcaatgtactaactttaagacaaaatgtat
ctctattttacatagttacatgaatgttccaagaccacatataaaccttt
aagctaatgcttaaatgaagaactactcaaaagaatatttaagggtatta
tcaaactaagatcattgttcttaaagcaccagtggaatttaaagggtgtc
tcatgaacttgccaataaactatgcatttgactggtagtgaaatattcac
ttgaaaacctgtttagtgaaaggttgggaggctttgctcttttgggaagg
ctagtaatacaatctcaaaggtatccctactatatgaatgacactgaaac
cgaagtacaacagttttatcttgttcggtctattacatcctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-167O02.b_50_577 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr2_18618061_18619181
seq2: B6Ng01-167O02.g_67_1160 (reverse)

seq1  CAGAGGAAATTTGTAAATAGAAACAGAACAAGATTAAAAAACTGGTTTTG  50
      |||||||    ||| |||||  || |||||||||   |||||||   |||
seq2  CAGAGGA----TGT-AATAG--ACCGAACAAGAT---AAAACTG---TTG  37

seq1  TACTTTTGGGGTTTCAGTGTCATTTTCATAAATAAGTAGGGAATAACTTT  100
      |||||    |||||||||||||  ||||||    ||||||| ||| ||||
seq2  TACTT---CGGTTTCAGTGTCA--TTCATA---TAGTAGGG-ATACCTTT  78

seq1  GAGATTGTATTACTAGCCTTTCCCAAAAGGAAGCAAAGCCTTCCAAACTT  150
      |||||||||||||||||| ||||||||||  ||||||||| ||| ||| |
seq2  GAGATTGTATTACTAGCC-TTCCCAAAAG--AGCAAAGCC-TCCCAACCT  124

seq1  TTCACTAAAACAGGTTTTCAAGTGAATATTTCACTACCAGTCAAATGCAT  200
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACT-AAACAGGTTTTCAAGTGAATATTTCACTACCAGTCAAATGCAT  173

seq1  AGTTTTATTTGGCAAGTTCATGAGACA-CCTTTAAATTCCACTGGTGCTT  249
      |||||   ||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTTT--ATTGGCAAGTTCATGAGACACCCTTTAAATTCCACTGGTGCTT  221

seq1  TAAGAACAATGATCTTAGTTTGATAATA-CCTTAAATATTCTTTTGAGTA  298
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAGAACAATGATCTTAGTTTGATAATACCCTTAAATATTCTTTTGAGTA  271

seq1  GTTCTTCATTTAAGCATTAGCTTAAAGGTTTATATGTGGTCTTGGAACAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCATTTAAGCATTAGCTTAAAGGTTTATATGTGGTCTTGGAACAT  321

seq1  TCATGTAACTATGTAAAATAGAGATACATTTTGTCTTAAAGTTAGTACAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAACTATGTAAAATAGAGATACATTTTGTCTTAAAGTTAGTACAT  371

seq1  TGAAAATGGGTCAGAACCAAAGGAATTGAAGGGGATTGCAACCCCAAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGGGTCAGAACCAAAGGAATTGAAGGGGATTGCAACCCCAAAAG  421

seq1  AAGAACAACAATACCAACCAACCAGTCCCCCAAGAGCTTCCAGGGACTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAACAATACCAACCAACCAGTCCCCCAAGAGCTTCCAGGGACTAA  471

seq1  GCCATCACCAAAGAGTACACATGGCTCCAGCTGCACACATTGCAGAGGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCACCAAAGAGTACACATGGCTCCAGCTGCACACATTGCAGAGGAT  521

seq1  GGCCTTGTCAGGCATCAGTGGGAGGAGAGGTCCTTAGTCCTATGAAGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGTCAGGCATCAGTGGGAGGAGAGGTCCTTAGTCCTATGAAGGCT  571

seq1  TGCTGGATGCCCCAGTGTAGGGGAACTGAGGGTGGGGAGGTGGGAGTGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGATGCCCCAGTGTAGGGGAACTGAGGGTGGGGAGGTGGGAGTGGT  621

seq1  GGGTGAGTGGAGGAACACCCTCATAGAAGCAGGGGGAGGGAGGATAGGGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGTGGAGGAACACCCTCATAGAAGCAGGGGGAGGGAGGATAGGGC  671

seq1  AGGGGCTGGGGGGGGGGACCTGGAAAGGGGATAACATTTGAAAAGTAATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTGGGGGGGGGGACCTGGAAAGGGGATAACATTTGAAAAGTAATA  721

seq1  ACAAAAATATCCAATTAAAAAAAAGAATATGGGTCAGGAAATATAGAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATATCCAATTAAAAAAAAGAATATGGGTCAGGAAATATAGAATG  771

seq1  GCTTTCTTTTCAGTTACAGTAATCTCTTCACTATATGTTATATTTAAATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTTTCAGTTACAGTAATCTCTTCACTATATGTTATATTTAAATT  821

seq1  ACCAACAATTCCACTTATGGGTACATTATGATCATTATCTTATATTTCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAATTCCACTTATGGGTACATTATGATCATTATCTTATATTTCTT  871

seq1  CATTGAACTTTAAAGGGCCTTGGGGGGGGACTGATAAAAACAAAGATAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAACTTTAAAGGGCCTTGGGGGGGGACTGATAAAAACAAAGATAAC  921

seq1  TTCTTTACTCCATCTAGCTTGTTCAGATATGAAATAGGCATCCTATAATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACTCCATCTAGCTTGTTCAGATATGAAATAGGCATCCTATAATG  971

seq1  TGTTTCAACAGGATAATAAATTCTACTAATGGGCATTGTTCATGAATACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAACAGGATAATAAATTCTACTAATGGGCATTGTTCATGAATACA  1021

seq1  GACTTTATAGTTTTAAATATTTTTTCTACTTGACTTTTAAAACCTAGCAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATAGTTTTAAATATTTTTTCTACTTGACTTTTAAAACCTAGCAT  1071

seq1  CCCATATGGAGGTTATTGAATTC  1121
      |||||||||||||||||||||||
seq2  CCCATATGGAGGTTATTGAATTC  1094