BAC Information

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BAC

Clone NameB6Ng01-168J23
Chromosome6 (Build37)
Map Location 107,446,930 - 107,447,148
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn4, Il5ra, Trnt1, Crbn, Ppia-ps6_1128.1
Downstream geneLrrn1, Setmar, Sumf1, LOC100043718, Itpr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168J23.bB6Ng01-168J23.g
ACCDH959813DH959814
length1,123219
definitionDH959813|Mus musculus domesticus DNA, BAC clone: B6Ng01-168J23, 5' end.DH959814|Mus musculus domesticus DNA, BAC clone: B6Ng01-168J23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtggaatttttagggtctctcatatatactatcatatcac
ctacaaatagtgatattttgacttcttcctttccaatttgtatttctttg
aactctttttgttgtctaattgctctggctaggacttcaagtactatatt
gagtaggttgggagagagtgagcagccttgtctagtccctgattttagta
ggattcgatccagtctctcactatttattttgatgttgactactggtttg
ctgtatattgcttttattatgtttaggtatgggccttgaattccttatct
ttccaagacttttatcatgaatgggtgttggattttgtcaaatgctttct
cagcatctaacaagatgatcatgtgttttttgtctttgagtttgtttata
tagtggattacattgatggaattccaaatattaaaccatccctgcatccc
tgagatgaagcctacttgatcatgatgtttgatcgttttgatgtgttatt
ggattcggtttgtgaggattttattggaaataagggaaatcagtctgaag
ttatcttattgtgtggtttagatatcagagtaattgtggcttcatagaat
gaattaggtagagtaccttctgcttctattttgtggaatagtttgaggag
aactggaattagatcttctttgaaggtctgatagaactctgcaccaaacc
catctggtcctgggcttttttgtttgagagattattaaggactgcttcta
tttctttagggtatataggactgtttagatcattaatctgatccttattt
aacttttgtacctggtatctgtctaggaagttgtccatttcatccatgtt
ttccagttttgtttgtttgttgtttgttttgttgagtataccattatgta
gtaggatctgatgatttttttttttttggatttctcagattctgttgcta
taatctcccttttcatttctgatttgtaattaaggatactgtcccctgtg
tcctctagtagtatggctgagggtttatcctatcttggttgaatttcctc
aaagaacccggcttctggttggattcatccattgaacaggatttatttgt
ccacacttgattgagattgaggc
acaagttaagcccagcaatgcctgaattttgttgtctgttgtattgtttc
catatttaattaatggcacttcagtgataaataaattttaaatgataaaa
ctaccaattagagccaagggatgtgataatttttttaaggtccacaaaga
ttacttaaaattctaagactttaaaaaatacagtcagaggacagattggt
ggggagggagggggtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_107446930_107447148
seq2: B6Ng01-168J23.g_73_291

seq1  ACAAGTTAAGCCCAGCAATGCCTGAATTTTGTTGTCTGTTGTATTGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTAAGCCCAGCAATGCCTGAATTTTGTTGTCTGTTGTATTGTTTC  50

seq1  CATATTTAATTAATGGCACTTCAGTGATAAATAAATTTTAAATGATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTAATTAATGGCACTTCAGTGATAAATAAATTTTAAATGATAAAA  100

seq1  CTACCAATTAGAGCCAAGGGATGTGATAATTTTTTTAAGGTCCACAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAATTAGAGCCAAGGGATGTGATAATTTTTTTAAGGTCCACAAAGA  150

seq1  TTACTTAAAATTCTAAGACTTTAAAAAATACAGTCAGAGGACAGATTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAAAATTCTAAGACTTTAAAAAATACAGTCAGAGGACAGATTGGT  200

seq1  GGGGAGGGAGGGGGTGAGG  219
      |||||||||||||||||||
seq2  GGGGAGGGAGGGGGTGAGG  219