BAC Information

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BAC

Clone NameB6Ng01-168L17
Chromosome6 (Build37)
Map Location 18,835,441 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168L17.bB6Ng01-168L17.g
ACCDH959893DH959894
length9961,211
definitionDH959893|Mus musculus domesticus DNA, BAC clone: B6Ng01-168L17, 5' end.DH959894|Mus musculus domesticus DNA, BAC clone: B6Ng01-168L17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttcttcatatatattggatattagtccc
ctatctgatttgggataggtaaagattctttcccaatctcttggtggcct
ttagtcttattgacggtgtctttcgctttgcagaagctttgcaattttat
gaggtcccatttatcgattcttgatcttacagccaagccattgctgttct
attcaggaatttttcccctgtgaccatatcttcaaggcttttccctactt
tctcctctataagtttcagtgtctctggttttatgtggagttccttaatc
cacttagatttgaccttagtacaaggagataagtatggatcgatttgcat
tcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatgc
tgttttttttccactgggtggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtggattcatctctgggtcttcaattctgttccattggtc
tacttgtctgtcactataccagtaccatgcagttttgatcacaattgctc
tgtagtacagttttaggtccggcatggtgattccaccagaggttctttta
tccttgagaagagttgttgctatcctcggttttttgttattcaagatgaa
tctgccaattgccctttctaattcgttgaagaattgagttggaattttga
tggggattgcattgaatatgtagattgcttttggcaagatggctattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatctttt
gagatcttctctaatttctttctttagagacttgaagttcttatcataca
gatctttcacttccttaggtagagtcacgccaaggtatttatatatttgt
gactattgagaggtgttgtttccctaattcttctcagcctgttatc

gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtgattaagatagggctga
aaattctagaggaaattcagggcaatctatcagaagtaaagcggggagag
agagtaggagcaaagagaaaatatggtacacaaaataagtatacaggcct
tttcaagggtcttgaacccgaggaaaagtttaggtcaggtaagaatacct
ggggagagattagaaggaaggaaaagaaaaaagaaaagaaaaaagatcga
ttagcagaggtctctaggagatactcgtcactagatgagctcaggaagcc
agctcttagtagttctgaagcagatgaagaattctcctctgaggaaacag
actgggaggaagaagcagcccattaccagccagctaattggtcaagaaaa
aagccaaaagcggctggcgaaagccagcgtactgttcaacctcccggcag
tcggtttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtc
agcaatgcgcagagaggcaatgcgcagagagatgcgcagagaggcaatgc
gcagagagatgcgcagagaggcagtgcgcagagagatgcgcagagaggca
gtgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttcccggtctttgaagg
agccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaag
aaattgccgagtcggtccgtaaatacggaaccatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactctgcgactggcaaac
gttgtaaagccgctctccctagtatggcaatatatgaaatggagagcgct
tgccgaagctgcacagcgcagcccgagcaacgcagctcttgactccagag
cgaagattggactttgacttgtaacggtcaggagctttttccgtctgatc
gctactacgtgggacctatgctcggatctctccacggctattagtgccct
cggaagagcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-168L17.b_47_573 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  CCCAGAGATGAATCCACACACCTATGGTCACTTGATCTTTGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||| ||||||||| ||| |||||||||||||||| |||||||||
seq2  CTAAAACCACCCAGTGGAAAAAAAACAGCATTTTCAACAAATGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      ||||||||||||||||| ||||||||||||  ||||||||||||||||||
seq2  CACAACTGGTTGTTATCATGTAGAAGAATGCAAATCGATCCATACTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| |||||||||||||||||||||||||| |||||||| ||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGCTGTGCTGTG  300
      |||| || ||||||||| |||||||| |||||||||||||||  ||||| 
seq2  ATGGTCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350
      || |  |||||||| ||||||||||| || ||| | ||||| ||||||||
seq2  AGATCAAGAATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400
       || ||||||||||||||||||||  |||| ||||||| |||||||||||
seq2  AGCGAAAGACACCGTCAATAAGAC-TAAAGGCCACCAAGAGATTGGGAAA  399

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450
      | |||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  GAATCTTTACCTATCCCAAATCAGATAGGGGACTAATATCCAATATATAT  449

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  500
       ||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  GAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAAAAA  499

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||| |||||||||||||||
seq2  ATGGGGCTCAGAGCTGAACAAAGAATTC  527


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