BAC Information

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BAC

Clone NameB6Ng01-168N15
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,442 - 18,835,968111,480,721 - 111,481,335
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168N15.bB6Ng01-168N15.g
ACCDH959985DH959986
length996996
definitionDH959985|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N15, 5' end.DH959986|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(111,480,721 - 111,481,335)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgact
ttctgatgtccaccttcttgagttctttatatatgttggatattagtccc
ctatatgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctctgcccatatcttcaaggcttttccccac
tttatcctctataagtttcagtgtctctggttttatgtgaatttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tcttcttgtctgtgtctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaaactttaggtcaggcatggtgattccactagaggttcttt
tatccttgagaagactttttgcaatcctaggttttttgttattccagatg
aatttgcaaactgctacttctagttcattgaagaattgatttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgtttatcctgctaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttattata
cagatctttcacctccttagttagagtcatgccaagatatttatattatg
gtgactattgagagggtgttgttccctaattctttctcagcttgtt
gaattcagagggccacctctgtctgccttacaagattaaatacaacagaa
accacacctaactggaaatagttctttaagtttataggctaggttagctc
atatatttgacaagtgtgtagttctcactattaatcagagaagcttcttc
ttagagcagaagatactattacagaaaatgactactgtccaaaacacagg
gaataagattatgtgaataccaacacccaattgcatctacaatacaaatg
gtacacttaagtatcagggaatattatggaagactgggggtaaagatggt
aagaacagaggacagacatgtgctgcaatatttgccctttaaatgaagga
aaatacacatataaaatcccaacaatatgcttaactaaacaagaccggca
taaaaataccatcaattgctatgccaatgtgaatgaagaaaatctcctaa
atccccatctcttgatgaacagttgtattgaattaataatgactgctaag
agtgggaggtttaatctttttgagggatcaatgccataatagtggtctca
tactaagtggtcagtactaaatatggacatatataagtaacagaagatgg
actcagcagggtgtactcatatataaatataagtgtgtctgtaggcatat
gtctaaccattattattgaaaaatgaagagatcatgaatttgagaagaac
tcggtgtatatgggaggagctgtagtggggaaattaaagggtggaaatga
tgtatataatacttatgtaaagttcacatttgatttgaaaaaccttgaaa
aaaatctgtgtgaatagtgattgagttttagttcagtatctactgctttg
aattccagaattacagtcttaattaaatacctatcttgataaagtggcaa
atgctaataaataaactaatggtgacagatgaaacttctatattggatat
ggaacatttaaatgagaaacaaacatagctagtgtgatgttttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-168N15.b_48_575 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAAATTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGATAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||||||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCAGAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCATATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| ||||||| ||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACATCAGAAAGTCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr1_111480721_111481335
seq2: B6Ng01-168N15.g_70_684 (reverse)

seq1  TACACCCTGCTGAGTCCATCTTCTGTTACTTATATATGTCCATATTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCCTGCTGAGTCCATCTTCTGTTACTTATATATGTCCATATTTAGT  50

seq1  ACTGACCACTTAGTATGAGACCACTATTATGGCATTGATCCCTCAAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCACTTAGTATGAGACCACTATTATGGCATTGATCCCTCAAAAAG  100

seq1  ATTAAACCTCCCACTCTTAGCAGTCATTATTAATTCAATACAACTGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACCTCCCACTCTTAGCAGTCATTATTAATTCAATACAACTGTTCA  150

seq1  TCAAGAGATGGGGATTTAGGAGATTTTCTTCATTCACATTGGCATAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGATGGGGATTTAGGAGATTTTCTTCATTCACATTGGCATAGCAA  200

seq1  TTGATGGTATTTTTATGCCGGTCTTGTTTAGTTAAGCATATTGTTGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGTATTTTTATGCCGGTCTTGTTTAGTTAAGCATATTGTTGGGAT  250

seq1  TTTATATGTGTATTTTCCTTCATTTAAAGGGCAAATATTGCAGCACATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGTGTATTTTCCTTCATTTAAAGGGCAAATATTGCAGCACATGT  300

seq1  CTGTCCTCTGTTCTTACCATCTTTACCCCCAGTCTTCCATAATATTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCTGTTCTTACCATCTTTACCCCCAGTCTTCCATAATATTCCCT  350

seq1  GATACTTAAGTGTACCATTTGTATTGTAGATGCAATTGGGTGTTGGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTAAGTGTACCATTTGTATTGTAGATGCAATTGGGTGTTGGTATT  400

seq1  CACATAATCTTATTCCCTGTGTTTTGGACAGTAGTCATTTTCTGTAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATCTTATTCCCTGTGTTTTGGACAGTAGTCATTTTCTGTAATAG  450

seq1  TATCTTCTGCTCTAAGAAGAAGCTTCTCTGATTAATAGTGAGAACTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTGCTCTAAGAAGAAGCTTCTCTGATTAATAGTGAGAACTACAC  500

seq1  ACTTGTCAAATATATGAGCTAACCTAGCCTATAAACTTAAAGAACTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCAAATATATGAGCTAACCTAGCCTATAAACTTAAAGAACTATTT  550

seq1  CCAGTTAGGTGTGGTTTCTGTTGTATTTAATCTTGTAAGGCAGACAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTAGGTGTGGTTTCTGTTGTATTTAATCTTGTAAGGCAGACAGAGG  600

seq1  TGGCCCTCTGAATTC  615
      |||||||||||||||
seq2  TGGCCCTCTGAATTC  615