BAC Information

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BAC

Clone NameB6Ng01-168N17
Chromosome6 (Build37)
Map Location 6,271,025 - 6,271,528
singlet/doubletsinglet
Overlap genenone
Upstream geneAsb4, Pdk4, Dync1i1, Slc25a13, EG667462
Downstream geneEG667468, LOC667471, LOC100040096, Shfm1, LOC545826, Dlx6as, Dlx5, Acn9, EG667500
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168N17.bB6Ng01-168N17.g
ACCDH959989DH959990
length1,220498
definitionDH959989|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N17, 5' end.DH959990|Mus musculus domesticus DNA, BAC clone: B6Ng01-168N17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatatctaaacataataaaagcaatatactgcaaatcg
gtagccaacatcaaactaaatggagagaaacttgaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctccctattcaatatag
tacttgaagttctagccagagcaattcgacaacaaaaggacatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactatttacagatgatgt
tatagtatatataattgaccctaaaaattccaccagagaactcctaaact
tgataaacaacttcagtgcagtagctggatatagaattaactcaaagaaa
tcagtgacctttctctacacaaaggataaacaggctgagaaagaaattag
gaaaacaacactcttcacaatagtcacaagataccttgatgtgactctaa
ctaagtaagtgaacgatctgtatgataagaacttcaaatctgtgaagaaa
gcaattgaagatctcagaagatggaaagatctcccatgctcatggattgg
cattattaatatagtaaaaatggctatcctgctgaaagcaatctacagat
tcaatgcaatccccattaaaattctaactcaattcatcactgagatagaa
aaggcaatttgcaaattcatctggaataataaaaaacctaggatagcaaa
aattcttctcaacaataaaagaaactctggtggaatcaccatgcctggcc
tcaagctgtactacgaagcaattgtgataaaaactgcatggtactggtac
agcgacagagaagtagatcaatggaatagaattgaagacccagaaatgag
cccacacgcctatggtcacttgatctttgacaagggagataaaaccatcc
agtgggaaaaaagacagcgcttccaacaatggtgctggctcactggcaga
tatcctgtagagatgtgaattgttcattcttatctcctgtacaagctcag
tctagtgatcagactcacataaacagagacactgaacttatagagagaag
tggggggaagcttgagaattggcacaggaaaatctgaacgaacgcaatgg
ccttgtgctgtagatcagatcacaatggacctaaaatgccaagcttaaaa
gacaaagacctgtcataagacaaaggctctacgatggagactttttacat
ctaatccgaatgggactatg
tataggcaagccctcaagattcaaaaacagtgcttttaactctattattc
tgtatttaaagagagggtctgactatgtagccctgacttgcccagaactc
atagagatctgcctatatttgcctcttaactattgggagcgttggtgttt
ttaaagaagactttacgtatggttctcttgagaacatgggaggcatgtgc
agtataatatgttttccctttttaaaatcctaatgggatatatgttatgg
cgcatagaagggattggaaataacatattataatttagcatttagcgaat
agcatgataagcttcaaagtaattctatcagagtaacttctgagtgttca
cagccaaacctgagctccatcgtggtacattttaaagatacagtcccatg
gtagagcatatatttataaagatgttggaccttacaattaccttatcatg
ttcaggttcatcctcaggccaaaataaaatggggggggggaaggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_6271025_6271528
seq2: B6Ng01-168N17.g_67_570

seq1  GAATTCTATAGGCAAGCCCTCAAGATTCAAAAACAGTGCTTTTAACTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGGCAAGCCCTCAAGATTCAAAAACAGTGCTTTTAACTCTA  50

seq1  TTATTCTGTATTTAAAGAGAGGGTCTGACTATGTAGCCCTGACTTGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGTATTTAAAGAGAGGGTCTGACTATGTAGCCCTGACTTGCCCA  100

seq1  GAACTCATAGAGATCTGCCTATATTTGCCTCTTAACTATTGGGAGCGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCATAGAGATCTGCCTATATTTGCCTCTTAACTATTGGGAGCGTTG  150

seq1  GTGTTTTTAAAGAAGACTTTACGTATGGTTCTCTTGAGAACATGGGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTAAAGAAGACTTTACGTATGGTTCTCTTGAGAACATGGGAGGC  200

seq1  ATGTGCAGTATAATATGTTTTCCCTTTTTAAAATCCTAATGGGATATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAGTATAATATGTTTTCCCTTTTTAAAATCCTAATGGGATATATG  250

seq1  TTATGGCGCATAGAAGGGATTGGAAATAACATATTATAATTTAGCATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCGCATAGAAGGGATTGGAAATAACATATTATAATTTAGCATTTA  300

seq1  GCGAATAGCATGATAAGCTTCAAAGTAATTCTATCAGAGTAACTTCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAATAGCATGATAAGCTTCAAAGTAATTCTATCAGAGTAACTTCTGAG  350

seq1  TGTTCACAGCCAAACCTGAGCTCCATCGTGGTACATTTTAAAGATACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACAGCCAAACCTGAGCTCCATCGTGGTACATTTTAAAGATACAGT  400

seq1  CCCATGGTAGAGCATATATTTATAAAGATGTTGGACCTTACAATTACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGTAGAGCATATATTTATAAAGATGTTGGACCTTACAATTACCTT  450

seq1  ATCATGTTCAGGTTCATCCTCAGGCCAAAATAAAATGGGGGGGGGGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTCAGGTTCATCCTCAGGCCAAAATAAAATGGGGGGGGGGAAGG  500

seq1  GGAA  504
      ||||
seq2  GGAA  504