BAC Information

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BAC

Clone NameB6Ng01-169K03
Chromosome6 (Build37)
Map Location 128,761,349 - 128,762,527
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862
Downstream geneKlrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169K03.bB6Ng01-169K03.g
ACCDH960558DH960559
length1,1691,236
definitionDH960558|Mus musculus domesticus DNA, BAC clone: B6Ng01-169K03, 5' end.DH960559|Mus musculus domesticus DNA, BAC clone: B6Ng01-169K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaccttcatagctagagttccagagatgatcccagtggaatcct
ccaaaatagtgaattgatgctgaagaagagacagagacagaccttcttct
tcttctcttgggagttatgagaaacatttccacccaatgtgtactttagg
attatttgatttcatacactacattcttgtgtggggtgaaccatgagcca
tcaggcaggactcggcaaatcttaaacagtgttataaagtgttagcaata
ccatcccaggaggcaagcgtgcacatgatcattgatgggaatattccctt
ccgatgtgtgctctgatggtgccactgtgttactgaaaagactgagggga
caccatcctgtcccaatgagtttgcctgttcacttctcagccctccaact
ccaacagccacgtccatcttggctatgcttttagaactgtccatgacctt
gaccatggctcacacatagtatgtagtatctggaagatgcctctgagcct
tgtaaagaatgcagatgtttctaggcaactctaaatctctcgctaatgtt
ctcccaccttggcaatttgcaattatggttttaaaatgctgtacccctga
gctcaggcactgtggtggtgtgaatatacttggctcagggagtaggacca
ttaggaggtggccttgtaggagtaggtatgacctttttggaggaattgtg
tcactgtggagtgggctttttttttttttctggattgctgggagtaaaac
atttattaaaaagtgttattaacttcatgaagcaatagacagcagcacag
tcaggtcacaggacctgggttctaaggacttgaaatcagagccaatatgg
tttctcaagactggtcacatacaatcctgcatgcttaggctctgattccc
atacagtagacagggaagagggggacatggtaatgtatggccatcaatca
ctacttttgatgtaagcttacctccctggggggaggaaccaagcacctcc
agggtctgtaaggtggaggatatacagacactgtctcaccaggagcctgg
aggtaactctgagaaggcaggagaaagtggtctaacagtttggtcctggg
tacattaggtccaggataccaccaggtactgggctagggcagggtccatt
tcacatggcaaccattttt
gaattcactacttcttaaaggaaatgaaaatttaattttgctattttcct
ggctagtgaaaaagagcatgtctgtcatgaaggacagcacaggagagacc
tggcacccagttgcttcatggtcaccgtgttccctttcatcagtgttgtt
tagatgcagttattgctaacatttgggtgatatgcaaagccatattataa
gccctcagctcgtgagcagcagaagcaggaagatctctgtgagttagcgg
ccagcctagtctgcatagggagttccaggccagccaggactacatacaga
gactgtcttcaaaagggaaatcacagcagaaaaataaaatagttgtatac
tagtgctattcttaaaaacaaaatcctactgaggggtggagagatgactc
agcagctaagaggtctgcttgttcttgcagaggaccgaggtgtggttccc
aacaccttacagttgctagcaaccatccctaagttccaggggacccagtg
ccctattatgaccactgtaggcaccaggtatgcacatgatgcacatgcat
acaagcaggcaaacattcatacacatgaaagtaaaataaataaatcttaa
aatattcaaagaagcttaaacaacagcaacataaatctctattgcagttt
taaaggccagaggttcagaagagatcctttttttttttcatgtatttatt
cattttatatcctgactacagtttcccctccctcctcttctcccagccct
ccctaccccatcaacctcccttctccccccatcaactcttcttccctctc
tgttcagaaaagggatggcctctcatggctatcaacccaccttggcttcc
aatacgactagactcatcttcttttgaggctagagaggaagcccagttag
cagaaaggcaggcaacagaatcagagacagcccctactcctgctgttaga
gtcccacacgaagaccaagctacataactgctatagagggcctacgtctg
tcctatgtatgctcttctggttggtagttcaatctctgtgagccctggtg
ggtcagataattgatctcgtggggttcttgggtggccttaatccctctgc
tccctcaagacttccttcccctcttttaccagagttaccaagcttcctta
ggtgggcttagatatcctgcccaggtttcagtgctgggaacttctgatgg
aatgtcaggcctgtctccagctagtaaaacattcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128761349_128762527
seq2: B6Ng01-169K03.b_49_1217

seq1  GAATTCCACCTTCATAGCTAGAGTTCCAGAGATGATCCCAGTGGAATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTCATAGCTAGAGTTCCAGAGATGATCCCAGTGGAATCCT  50

seq1  CCAAAATAGTGAATTGATGCTGAAGAAGAGACAGAGACAGACCTTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAGTGAATTGATGCTGAAGAAGAGACAGAGACAGACCTTCTTCT  100

seq1  TCTTCTCTTGGGAGTTATGAGAAACATTTCCACCCAATGTGTACTTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTGGGAGTTATGAGAAACATTTCCACCCAATGTGTACTTTAGG  150

seq1  ATTATTTGATTTCATACACTACATTCTTGTGTGGGGTGAACCATGAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGATTTCATACACTACATTCTTGTGTGGGGTGAACCATGAGCCA  200

seq1  TCAGGCAGGACTCGGCAAATCTTAAACAGTGTTATAAAGTGTTAGCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAGGACTCGGCAAATCTTAAACAGTGTTATAAAGTGTTAGCAATA  250

seq1  CCATCCCAGGAGGCAAGCGTGCACATGATCATTGATGGGAATATTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCAGGAGGCAAGCGTGCACATGATCATTGATGGGAATATTCCCTT  300

seq1  CCGATGTGTGCTCTGATGGTGCCACTGTGTTACTGAAAAGACTGAGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGTGTGCTCTGATGGTGCCACTGTGTTACTGAAAAGACTGAGGGGA  350

seq1  CACCATCCTGTCCCAATGAGTTTGCCTGTTCACTTCTCAGCCCTCCAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCTGTCCCAATGAGTTTGCCTGTTCACTTCTCAGCCCTCCAACT  400

seq1  CCAACAGCCACGTCCATCTTGGCTATGCTTTTAGAACTGTCCATGACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGCCACGTCCATCTTGGCTATGCTTTTAGAACTGTCCATGACCTT  450

seq1  GACCATGGCTCACACATAGTATGTAGTATCTGGAAGATGCCTCTGAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGGCTCACACATAGTATGTAGTATCTGGAAGATGCCTCTGAGCCT  500

seq1  TGTAAAGAATGCAGATGTTTCTAGGCAACTCTAAATCTCTCGCTAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAATGCAGATGTTTCTAGGCAACTCTAAATCTCTCGCTAATGTT  550

seq1  CTCCCACCTTGGCAATTTGCAATTATGGTTTTAAAATGCTGTACCCCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCTTGGCAATTTGCAATTATGGTTTTAAAATGCTGTACCCCTGA  600

seq1  GCTCAGGCACTGTGGTGGTGTGAATATACTTGGCTCAGGGAGTAGGACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGCACTGTGGTGGTGTGAATATACTTGGCTCAGGGAGTAGGACCA  650

seq1  TTAGGAGGTGGCCTTGTAGGAGTAGGTATGACCTTTTTGGAGGAATTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGGTGGCCTTGTAGGAGTAGGTATGACCTTTTTGGAGGAATTGTG  700

seq1  TCACTGTGGAGTGGGCTTTTTTTTTTTTTCTGGATTGCTGGGAGTAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGGAGTGGGCTTTTTTTTTTTTTCTGGATTGCTGGGAGTAAAAC  750

seq1  ATTTATTAAAAAGTGTTATTAACTTCATGAAGCAATAGACAGCAGCACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAAAAAGTGTTATTAACTTCATGAAGCAATAGACAGCAGCACAG  800

seq1  TCAGGTCACAGGACCTGGGTTCTAAGGACTTGAAATCAGAGCCAATATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCACAGGACCTGGGTTCTAAGGACTTGAAATCAGAGCCAATATGG  850

seq1  TTTCTCAAGACTGGTCACATACAATCCTGCATGCTTAAGCTCTGATTCCC  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTCTCAAGACTGGTCACATACAATCCTGCATGCTTAGGCTCTGATTCCC  900

seq1  ATACAGTAGACAGGGAAGAGGGTGACATGGTAATGTATGGCCATCAATCA  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATACAGTAGACAGGGAAGAGGGGGACATGGTAATGTATGGCCATCAATCA  950

seq1  CTAC-TTTGATGTAAGCTTACCTCCCTGGTGAGA-GAACCAAGCACCTCC  998
      |||| |||||||||||||||||||||||| | || |||||||||||||||
seq2  CTACTTTTGATGTAAGCTTACCTCCCTGGGGGGAGGAACCAAGCACCTCC  1000

seq1  A-GGTCTGTTAGGT-GAGGAATAACAGACACTGTCTCACCAGGAGCCTGG  1046
      | ||||||| |||| |||||   |||||||||||||||||||||||||||
seq2  AGGGTCTGTAAGGTGGAGGATATACAGACACTGTCTCACCAGGAGCCTGG  1050

seq1  AGGTAACCCTGAG-AGGCA-GAGAACAGTTGTCCATAATCAGTTTTGTCC  1094
      ||||||| ||||| ||||| ||||| ||| |||  ||| |||||| ||||
seq2  AGGTAACTCTGAGAAGGCAGGAGAA-AGTGGTC--TAA-CAGTTTGGTCC  1096

seq1  -GTGTACCATTTGGGTCTCCAGGAATCACACCCAGGTCACTGGGCTAGGC  1143
       | ||| |||| ||   |||||||   ||  |||||| ||||||||||| 
seq2  TGGGTA-CATTAGG---TCCAGGA--TACCACCAGGT-ACTGGGCTAGG-  1138

seq1  AGCAGGCTCCATTTCACACTGGCAAACCCCATTTTT  1179
       ||||| ||||||||||| ||||||   ||||||||
seq2  -GCAGGGTCCATTTCACA-TGGCAA---CCATTTTT  1169