BAC Information

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BAC

Clone NameB6Ng01-171O17
Chromosome6 (Build37)
Map Location 125,826,897 - 125,958,751
singlet/doubletdoublet
Overlap geneTmem16b
Upstream geneCd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf
Downstream geneNtf3, LOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171O17.bB6Ng01-171O17.g
ACCGA000675GA000676
length287552
definitionB6Ng01-171O17.b B6Ng01-171O17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,958,465 - 125,958,751)(125,826,897 - 125,827,426)
sequence
ttgaggtcaacccttcctgctttccgaccatttcaaaccatctgtgattt
cagagtctctctgtacaccaatactctatggtctgctgagtggattgtta
ttcattgttcaggctcaactctgaccccatcccactcacctccatcccat
gagtctctctttcctcacttcccaacttccccatctagactgaagtgcag
agggcagcactcttctcctctgccctcccacaatgccttgctttacgttt
atttgacctgctccctgggggaaggggggggggagat
gaattctttcctctaatctccatgtagcctgctccattccattccattcc
attccattccattccattccattccattccattccattccatgccatgcc
attccatgccattccatgccattccacgccattccatgccattccactcc
attccactccactccactccactccactccactccactccactccactcc
actccactccactccattccactccactccactcccttcccttccactcc
attccactccactccactccactccattccattccactccactccactcc
cttcccttccactcccttcccttccactccactccactccactccattcc
attccattccactccatcccttccattccattctatccttccttccttcc
tcttccttccttccttccttccttccttccttccttccttcatttctttt
ttctctttctttctttctttctttctttctttctttctttctttctttct
tttctttcccttccttcctttcctctttctttctttctttctttctttct
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_125958465_125958751
seq2: B6Ng01-171O17.b_50_336 (reverse)

seq1  ATCTCCCCCCCCCCTTCCCCCAGGGAGCAGGTCAAATAAACGTAAAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCCCCCCCCTTCCCCCAGGGAGCAGGTCAAATAAACGTAAAGCAA  50

seq1  GGCATTGTGGGAGGGCAGAGGAGAAGAGTGCTGCCCTCTGCACTTCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGTGGGAGGGCAGAGGAGAAGAGTGCTGCCCTCTGCACTTCAGTC  100

seq1  TAGATGGGGAAGTTGGGAAGTGAGGAAAGAGAGACTCATGGGATGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGGGAAGTTGGGAAGTGAGGAAAGAGAGACTCATGGGATGGAGGT  150

seq1  GAGTGGGATGGGGTCAGAGTTGAGCCTGAACAATGAATAACAATCCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGATGGGGTCAGAGTTGAGCCTGAACAATGAATAACAATCCACTC  200

seq1  AGCAGACCATAGAGTATTGGTGTACAGAGAGACTCTGAAATCACAGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACCATAGAGTATTGGTGTACAGAGAGACTCTGAAATCACAGATGG  250

seq1  TTTGAAATGGTCGGAAAGCAGGAAGGGTTGACCTCAA  287
      |||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGGTCGGAAAGCAGGAAGGGTTGACCTCAA  287

seq1: chr6_125826897_125827426
seq2: B6Ng01-171O17.g_68_597

seq1  GAATTCTTTCCTCTAATCTCCATGTAGCCTGCTCCATTCCATTCCATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTCTAATCTCCATGTAGCCTGCTCCATTCCATTCCATTCC  50

seq1  ATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATGCCATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATGCCATGCC  100

seq1  ATTCCATGCCATTCCATGCCATTCCACGCCATTCCATGCCATTCCACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATGCCATTCCATGCCATTCCACGCCATTCCATGCCATTCCACTCC  150

seq1  ATTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCCACTCC  200

seq1  ACTCCACTCCACTCCATTCCACTCCACTCCACTCCCTTCCCTTCCACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACTCCACTCCATTCCACTCCACTCCACTCCCTTCCCTTCCACTCC  250

seq1  ATTCCACTCCACTCCACTCCACTCCATTCCATTCCACTCCACTCCACTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACTCCACTCCACTCCACTCCATTCCATTCCACTCCACTCCACTCC  300

seq1  CTTCCCTTCCACTCCCTTCCCTTCCACTCCACTCCACTCCACTCCATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTCCACTCCCTTCCCTTCCACTCCACTCCACTCCACTCCATTCC  350

seq1  ATTCCATTCCACTCCATCCCTTCCATTCCATTCTATCCTTCCTTCCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTCCACTCCATCCCTTCCATTCCATTCTATCCTTCCTTCCTTCC  400

seq1  TCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCATTTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCATTTCTTTT  450

seq1  TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  500

seq1  TTTCTTTCCCTTCCTTCCTTTCCTCTTTCT  530
      ||||||||||||||||||||||||||||||
seq2  TTTCTTTCCCTTCCTTCCTTTCCTCTTTCT  530