BAC Information

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BAC

Clone NameB6Ng01-172B15
Chromosome6 (Build37)
Map Location 13,583,154 - 13,584,277
singlet/doubletsinglet
Overlap geneB630005N14Rik
Upstream geneThsd7a, LOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168
Downstream geneGpr85, 2610001J05Rik, LOC100041043, LOC100040513, LOC667797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172B15.bB6Ng01-172B15.g
ACCGA000808GA000809
length5021,114
definitionB6Ng01-172B15.b B6Ng01-172B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gtttctggaaacctttgcaaagctgaggaatatgagactgcgaatcacgg
agaacccttcccttgcagcacagaagcaatctcttcccatcttcgagtat
gtaatgcatatctctctctctctctctctctctctctctctctctctctc
tctctctctctctctctctctgcacacacacacacatacatacataccca
gcgagagagagcgcgcgtgtctcactatacctctcgctcgctaacacagt
tttttttttttctctctcgcactcgctctctctctctctctctctgacac
gcgatcgagcgcgcatagagagagagagagagagtgtgagagagatattt
tatatattgagaggagcgcatgcgtacgtgagagaaagagggattgggtg
tttttcctctctcgtttgcggagtctaactcttcttttggtgtgtcatag
atagacgggatgagagagagatgtctccatacccttgtcctcgcgagaca
ct

gaattcaggacctcctgtgctggacaggtgtttaaccactgacttatgct
ctctattcttacaaagctttatacttgcaaactactatatatattattaa
gcaaccaaaaacaggaatataaaaatatatagttgaaaaattaagcataa
actaagatatctataactctacatatatttcttttcttttaaaaaatctt
aacacctgtttttcctgttgcttagcagagaacaacgaaaaagaagtaac
acttggcaaatactactgctctgaatgactagaaaaagttcatgctcatg
tgttctagttgctgagaccacttgatattcacttatgaaatttctgtttt
tcagacttagtagtctcttaaatactttctattatttttatgtctgcttc
tttcacacacacgcagagagagagagagagaaacagagagagagagaaac
agagacagggagagagagagaaagaaagagagagagagagagagagaaac
agagacagggagagagagacagagacagggagagagagagagagaaagaa
agagagatagagaagagagacagagagacagagagagatagttctgatgc
gtcacaatgtccattcacctatgttcctctgtccaccaaatccttttcct
tagtctcctttatacctgagttaggttgccgcactttgtattttataggt
atggttatcatagtgtgtatagttcaatctgagacccttctgaaaataaa
agaaatttagcaaatatacaagaagactatacaaaaataaaacatatgat
catttccaagtttaagcagagtagcaagtgaaattacagtaccattagtg
gttaagtactcagccagctaaaatgtctttaattgacttttcagtcttag
tagccgagtatgattattttttccactgcttttgggttaggaacatgcaa
ccaaccatgttcagtatactctactataaattatacttgtatgaaatttt
cagaaaaatcagtgtaggtgtatggcattgattgaatatcctaaatagac
tattgttatggtagtttcaacatttctatgactagcatcaccttgatgaa
aatggattgcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_13583154_13584277
seq2: B6Ng01-172B15.g_63_1176

seq1  GAATTCAGGACCTCCTGTGCTGGACAGGTGTTTAACCACTGACTTATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCCTGTGCTGGACAGGTGTTTAACCACTGACTTATGCT  50

seq1  CTCTATTCTTACAAAGCTTTATACTTGCAAACTACTATATATATTATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTCTTACAAAGCTTTATACTTGCAAACTACTATATATATTATTAA  100

seq1  GCAACCAAAAACAGGAATATAAAAATATATAGTTGAAAAATTAAGCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCAAAAACAGGAATATAAAAATATATAGTTGAAAAATTAAGCATAA  150

seq1  ACTAAGATATCTATAACTCTACATATATTTCTTTTCTTTTAAAAAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATATCTATAACTCTACATATATTTCTTTTCTTTTAAAAAATCTT  200

seq1  AACACCTGTTTTTCCTGTTGCTTAGCAGAGAACAACGAAAAAGAAGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGTTTTTCCTGTTGCTTAGCAGAGAACAACGAAAAAGAAGTAAC  250

seq1  ACTTGGCAAATACTACTGCTCTGAATGACTAGAAAAAGTTCATGCTCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCAAATACTACTGCTCTGAATGACTAGAAAAAGTTCATGCTCATG  300

seq1  TGTTCTAGTTGCTGAGACCACTTGATATTCACTTATGAAATTTCTGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGTTGCTGAGACCACTTGATATTCACTTATGAAATTTCTGTTTT  350

seq1  TCAGACTTAGTAGTCTCTTAAATACTTTCTATTATTTTTATGTCTGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTAGTAGTCTCTTAAATACTTTCTATTATTTTTATGTCTGCTTC  400

seq1  TTTCACACACACGCAGAGAGAGAGAGAGAGAAACAGAGAGAGAGAGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACACACGCAGAGAGAGAGAGAGAGAAACAGAGAGAGAGAGAAAC  450

seq1  AGAGACAGGGAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGGAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAC  500

seq1  AGAGACAGGGAGAGAGAGACAGAGACAGGGAGAGAGAGAGAGAGAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGGAGAGAGAGACAGAGACAGGGAGAGAGAGAGAGAGAAAGAA  550

seq1  AGAGAGATAGAGAAGAGAGACAGAGAGACAGAGAGAGATAGTTCTGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATAGAGAAGAGAGACAGAGAGACAGAGAGAGATAGTTCTGATGC  600

seq1  GTCACAATGTCCATTCACCTATGTTCCTCTGTCCACCAAATCCTTTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAATGTCCATTCACCTATGTTCCTCTGTCCACCAAATCCTTTTCCT  650

seq1  TAGTCTCCTTTATACCTGAGTTAGGTTGCCGCACTTTGTATTTTATAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCCTTTATACCTGAGTTAGGTTGCCGCACTTTGTATTTTATAGGT  700

seq1  ATGGTTATCATAGTGTGTATAGTTCAATCTGAGACCCTTCTGAAAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTATCATAGTGTGTATAGTTCAATCTGAGACCCTTCTGAAAATAAA  750

seq1  AGAAATTTAGCAAATATACAAGAAGACTATACAAAAATAAAACATATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTAGCAAATATACAAGAAGACTATACAAAAATAAAACATATGAT  800

seq1  CA-TTCCAAGTTTAAGCAGAGTAGCAAGTGAAATTACAGTACCATTAGTG  849
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAAGTTTAAGCAGAGTAGCAAGTGAAATTACAGTACCATTAGTG  850

seq1  GTTAAGTACTCAGCCAGCTAAAATGTC-TTAATTGAC-TTTCAGTCTTAG  897
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  GTTAAGTACTCAGCCAGCTAAAATGTCTTTAATTGACTTTTCAGTCTTAG  900

seq1  TAGCCGAGTATGATTATTTTTTCCACTGCTTTTGGGTTAGGAACATGCAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCGAGTATGATTATTTTTTCCACTGCTTTTGGGTTAGGAACATGCAA  950

seq1  CCAACCATGTTCAGTATACTCTACTATAAAATATACTTGTATG-AATTTT  996
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  CCAACCATGTTCAGTATACTCTACTATAAATTATACTTGTATGAAATTTT  1000

seq1  CAG-AAAATCAGTGTTAGGTGTATGGCATAAATTTGAATATTCTAAATAG  1045
      ||| |||||||||| ||||||||||||||  | |||||||| ||||||||
seq2  CAGAAAAATCAGTG-TAGGTGTATGGCATTGA-TTGAATATCCTAAATAG  1048

seq1  TACTATTGTTTATGGTAGTTTTCCAACAATTTTCTTATGACTTAACATCA  1095
       ||||||| ||||||||||||  |||||  |||| |||||| || |||||
seq2  -ACTATTG-TTATGGTAGTTT--CAACA--TTTC-TATGAC-TAGCATCA  1090

seq1  ACCCCTTTGATGAAAAATGGATTGTATTT  1124
          | |||||| ||||||||||| ||||
seq2  ----CCTTGATG-AAAATGGATTGCATTT  1114


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