BAC Information

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BAC

Clone NameB6Ng01-172H20
Chromosome6 (Build37)
Map Location 19,807,473 - 19,808,527
singlet/doubletsinglet
Overlap genenone
Upstream geneAnkrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172H20.bB6Ng01-172H20.g
ACCGA001091GA001092
length1,0611,186
definitionB6Ng01-172H20.b B6Ng01-172H20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttaaacttggtacctacgtttgttagtattttggagtgaga
aacgaacatgtaataatatgagaatttcgattatgaaggttcttcaaatc
tggttctctattttatgtttttctaccatcgtaattcaacaaattatatt
atagatatcataatgttttaaaaataatatgccatcctttttctataagc
acacttggttttgagtattactttcaaaggcaaagtcatatacaaaagaa
aaaaaggcaaaaatctatgagttttctgtgacactcaacagataaaagta
actagaggtttaatctttacaactcaaagaaaccaacaatcatttctcct
ggtattatatgtcttgctcattatcattttctttctcatttttttaaagg
agctgattcactctcttatgctccctacggatcatgccattaaaaatgag
cctggagacagtgttagcattcagatttttgaataatgtctgaaggatag
aagaatgtatgcgaaagtcatttaaaattcaccaccacctttaattagtc
ttatttaaccttgcagtctcaacaaatgaatatggctagatcaagtgagt
ttttgttagtgtttctaccatgatcccggatattaattgaagggctctac
acagactgagaattgatgaagcatgtgatgtgagagtgcttgtaactcta
gggaaatggtgacctttttaaggatgagaatacttaaaggttacagggca
gggtttttccctagcttcctgtaggaatttgttacagatttgctagaact
ttttttttttttttttttttttttttttaggcttaaataagtctggttat
aagctttcaaagctaaattattctgaacattaaagcagaagtaaaagtcc
ctcattagagccgaatttcagtacaagccctgctctgcttgcatttgata
tcatgcctatttttctgtggaataaaagtgattcatacgttgacgttcaa
tgcaaaagcatcttagcacaggtgtagtattagacaacttcaacttctgt
tgctgacatgg

gaattctcacccaaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaaaatccttaatcatcagagaaatgcaaatcaaaacaacccttagat
tccatctcacaccagtcagaatggctaagatcaaaaattcatgtgacaac
agatgctggggaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctagaaatcagtctggcgtttcctca
gaaaattggacatagtactactggaggatcccgcagtacctctcctgggc
atatatccagaagatgtcccaatgggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaatgtggtacatttacacaatag
agtactactcagctattaaaaatatgaatttttgaatttcctaggcaatt
ggttggacctggagggcatcatcctgagtgagataacacaatcacaaagg
aactcaaatgatatgtactcactgataagtggatattagcccagaagctt
agtatagggagatataaggtacaatttgcaaaatatatgaaactgaagaa
gaacgaagaccaaagtgtggacactttgccccttcttagaattggaaaca
atcacccatggaaggagttacagagacaaagtttggagctgagacaaaag
gatggaccatctagagactgccatatccagggatctatcccaaaattagc
ctccaaaggatgacaccattgcatacactagcaagcatttgttgcaagga
ccgtgatatagctgtctcttgtgagactaggctggggcttagcaaaccca
gaagtgaatgctcacagtcaactgttggatggatcacagggcccccaatg
gaggagctagaagaagtatccaaggagctaagagatctgcaccctgtagg
tgcacactatgaactaaccagtacttccggaaattcttgtcttctagctg
catatgttattcaaaggatgcctagttgcatcactggcaaaggattggcc
cactgactgccaaactttatatgccagtacaggaacgtcatgcttaaatt
ggcattggctggcttacgacgatctcgtcgctacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19807473_19808527
seq2: B6Ng01-172H20.b_46_1106

seq1  GAATTCTTTTTAAACTTGGTACCTACGTTTGTTAGTATTTTGGAGTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAAACTTGGTACCTACGTTTGTTAGTATTTTGGAGTGAGA  50

seq1  AACGAACATGTAATAATATGAGAATTTCGATTATGAAGGTTCTTCAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAACATGTAATAATATGAGAATTTCGATTATGAAGGTTCTTCAAATC  100

seq1  TGGTTCTCTATTTTATGTTTTTCTACCATCGTAATTCAACAAATTATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTCTATTTTATGTTTTTCTACCATCGTAATTCAACAAATTATATT  150

seq1  ATAGATATCATAATGTTTTAAAAATAATATGCCATCCTTTTTCTATAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATCATAATGTTTTAAAAATAATATGCCATCCTTTTTCTATAAGC  200

seq1  ACACTTGGTTTTGAGTATTACTTTCAAAGGCAAAGTCATATACAAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGGTTTTGAGTATTACTTTCAAAGGCAAAGTCATATACAAAAGAA  250

seq1  AAAAAGGCAAAAATCTATGAGTTTTCTGTGACACTCAACAGATAAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCAAAAATCTATGAGTTTTCTGTGACACTCAACAGATAAAAGTA  300

seq1  ACTAGAGGTTTAATCTTTACAACTCAAAGAAACCAACAATCATTTCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGGTTTAATCTTTACAACTCAAAGAAACCAACAATCATTTCTCCT  350

seq1  GGTATTATATGTCTTGCTCATTATCATTTTCTTTCTCATTTTTTTAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTATATGTCTTGCTCATTATCATTTTCTTTCTCATTTTTTTAAAGG  400

seq1  AGCTGATTCACTCTCTTATGCTCCCTACGGATCATGCCATTAAAAATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATTCACTCTCTTATGCTCCCTACGGATCATGCCATTAAAAATGAG  450

seq1  CCTGGAGACAGTGTTAGCATTCAGATTTTTGAATAATGTCTGAAGGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGACAGTGTTAGCATTCAGATTTTTGAATAATGTCTGAAGGATAG  500

seq1  AAGAATGTATGCGAAAGTCATTTAAAATTCACCACCACCTTTAATTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTATGCGAAAGTCATTTAAAATTCACCACCACCTTTAATTAGTC  550

seq1  TTATTTAACCTTGCAGTCTCAACAAATGAATATGGCTAGATCAAGTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAACCTTGCAGTCTCAACAAATGAATATGGCTAGATCAAGTGAGT  600

seq1  TTTTGTTAGTGTTTCTACCATGATCCCGGATATTAATTGAAGGGCTCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAGTGTTTCTACCATGATCCCGGATATTAATTGAAGGGCTCTAC  650

seq1  ACAGACTGAGAATTGATGAAGCATGTGATGTGAGAGTGCTTGTAACTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTGAGAATTGATGAAGCATGTGATGTGAGAGTGCTTGTAACTCTA  700

seq1  GGGAAATGGTGACCTTTTTAAGGATGAGAATACTTAAAGGTTACAGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGGTGACCTTTTTAAGGATGAGAATACTTAAAGGTTACAGGGCA  750

seq1  GGGTTTTTCCCTAGCTTCCTGTAGGAATTTGTTACAGATTTGCTAGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGTTTTTCCCTAGCTTCCTGTAGGAATTTGTTACAGATTTGCTAGAAC-  799

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTAA--TAGTCT-GTT  847
       ||||||||||||||||||||||||||||| |||||||   ||||| |||
seq2  -TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGCTTAAATAAGTCTGGTT  848

seq1  AT-AGCTTTCAAAGCTAAATTA-TCTG-ACAT--AAGCAGAAGT-AAAGT  891
      || ||||||||||||||||||| |||| ||||  |||||||||| |||||
seq2  ATAAGCTTTCAAAGCTAAATTATTCTGAACATTAAAGCAGAAGTAAAAGT  898

seq1  -CCTCATTAGAG-CGAA-TTCAGTACAAG-CCTGCTCTGCTTTGCATTTG  937
       ||||||||||| |||| ||||||||||| |||||||||| |||||||||
seq2  CCCTCATTAGAGCCGAATTTCAGTACAAGCCCTGCTCTGC-TTGCATTTG  947

seq1  ATTATCATGCTTA-TTTTCTGT-GAATAAAAGTGATTCATACGTTGACGT  985
      | |||||||| || |||||||| |||||||||||||||||||||||||||
seq2  A-TATCATGCCTATTTTTCTGTGGAATAAAAGTGATTCATACGTTGACGT  996

seq1  TCAATGCAAAAGGCATCTTAGCACAAGGGTGTAGTATTAGACAACCTTCA  1035
      ||||||||||| |||||||||||||  ||||||||||||||||| |||| 
seq2  TCAATGCAAAA-GCATCTTAGCACA--GGTGTAGTATTAGACAA-CTTC-  1041

seq1  AACTTCTGTTGCTGACATGG  1055
      ||||||||||||||||||||
seq2  AACTTCTGTTGCTGACATGG  1061


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