BAC Information

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BAC

Clone NameB6Ng01-176L23
Chromosome6 (Build37)
Map Location 25,551,422 - 25,668,509
singlet/doubletdoublet
Overlap geneGpr37
Upstream geneLmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358
Downstream genePot1a, EG626912, LOC100041210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176L23.bB6Ng01-176L23.g
ACCGA004203GA004204
length9431,067
definitionB6Ng01-176L23.b B6Ng01-176L23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,667,973 - 25,668,509)(25,551,422 - 25,552,488)
sequence
gaattcagtggacaactttcagaactctgttccatcatgtgtgtcagtct
atattagttgcgcttctattgctatgataaaacaccatgaccaaggtgac
ttccagaagaaagtttacattgggtttatgttttcagggtattagagacc
aaatgttgggacaacccacagaagacttggagctggaaactgagaactga
catctcaaaccataaacaggaaacagtgcactaattgggaatgttgtgcg
gttgtggaaacctcaaggccagacttcagtagcacagtttcttcatcaag
gtctcaccctctaagacctctcaaacaacaccaacaactgggaacaagta
tccccatgccctacacatgtgagaacatctcattccaaccacctcagcat
ctccagaatcaagctcaactcaggacatcaggtttgatgggcctctaact
aaccactgagaaatctcactgccccctcatccctaaaaatttcattatgt
ttggagaaaattctttctgttgggatacattggtaatcctgcggctaacc
atgctgtgccttcccagttctgaaaagccttcagctgccatgtctttaat
gtacctcctagaactctgaagagctgtgtccttcttttgctctttcccag
tcatatccatgcttccacagtagtaataacttcatttatctttagaagta
atcaattaattttaggtatgaacaaccctttataatccttccattatata
gtgggttttgtttttttttcttttaacaatgttcaattttttcacgtgct
agtgctggtttttcataatttccacaccctccctctttcgactgcagctc
ttcccatgttttctcactatgacctctaaaattcatgatctctcctttaa
ttatcactttatatatacacacacacagggtagagagagagag
gaattctttgttcagttctgagccccattttttaatgggattatttgatt
ttctgaagtccaccttcttgagttttttatatatgttggaatggcttgtg
ctgtaagatcgagaattgacaaatgggacctaatgaaactccaaagtttc
tgcaaggcaaaagacaccgtcaataagacaaaaagaccaccaatatattg
ggaaaggatctttacctatcctaaatcagataggggagtaatatccaaca
tatataaaggactggtaaatttttacaacgaccttttggcctgcaagctg
ggactacaaccatccccttagttttcctaagcccaagtcaatgcatctgc
cttccaattaacacttcattggactatacacctgagaattaccccacaaa
actctattttgatacaattatccctctactgaatagggtggtatggctgt
aattaggatggagacacaaagaaaggcttttaaacctttactagaacact
attaaaggatggagtgggttcacaataaaggataaaggcagcttttaagc
cttgggatgtttgggtacacaataataattatattacatatgtcaatgca
cagcacaaacaatcccttgtgcattttggtcatatcagcataaggaaacg
tgaatgttttattgaaattattattgcacatatgttaaaatataacttta
tgaaaacatatatatagctctccttgtgaattttgaacataactgagaac
tactaccataatttatagatttttcaataaatctatcaatttttacatat
aatttttaatgtgaataaatgaattatttccccctataagtctttaaatt
ctatccataaaaatcatagtaccatacatatatggtgatttttaaatttg
tttttaggcttttttttatataaatctttcctggaatgatgttttttcag
gtttatcatttaaatcttagactagcctggcgtgtggttgcacgctttta
tcccagcacttgggaggcagaggcagaacagatttctgagttcgaggcca
gctgtcttacagaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_25667973_25668509
seq2: B6Ng01-176L23.b_446_985 (reverse)

seq1  CTCTCTCTCTCT-CCCTGTGTGTGTGTATATATAAAGTGATAATTTAAGG  49
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  CTCTCTCTCTCTACCCTGTGTGTGTGTATATATAAAGTGATAATTAAAGG  50

seq1  AGAGATCATGAATTTTAGAGGTCATAGTGAGAAAACATGGGAAGAGCTGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCATGAATTTTAGAGGTCATAGTGAGAAAACATGGGAAGAGCTGC  100

seq1  AGTGGAAAGAGGGA-GGTGTGGAAATTATGAAAAACCAGCACTAGCACGT  148
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTCGAAAGAGGGAGGGTGTGGAAATTATGAAAAACCAGCACTAGCACGT  150

seq1  GAAAAAATTGAACATTGTTAAAAG-AAAAAAAACAAAACCCACTATATAA  197
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAAAAATTGAACATTGTTAAAAGAAAAAAAAACAAAACCCACTATATAA  200

seq1  TGGAAGGATTATAAAGGGTTGTTCATACCTAAAATTAATTGATTACTTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGATTATAAAGGGTTGTTCATACCTAAAATTAATTGATTACTTCT  250

seq1  AAAGATAAATGAAGTTATTACTACTGTGGAAGCATGGATATGACTGGGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAATGAAGTTATTACTACTGTGGAAGCATGGATATGACTGGGAA  300

seq1  AGAGCAAAAGAAGGACACAGCTCTTCAGAGTTCTAGGAGGTACATTAAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAAGAAGGACACAGCTCTTCAGAGTTCTAGGAGGTACATTAAAG  350

seq1  ACATGGCAGCTGAAGGCTTTTCAGAACTGGGAAGGCACAGCATGGTTAGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCAGCTGAAGGCTTTTCAGAACTGGGAAGGCACAGCATGGTTAGC  400

seq1  CGCAGGATTACCAATGTATCCCAACAGAAAGAATTTTCTCCAAACATAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGATTACCAATGTATCCCAACAGAAAGAATTTTCTCCAAACATAAT  450

seq1  GAAATTTTTAGGGATGAGGGGGCAGTGAGATTTCTCAGTGGTTAGTTAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTTAGGGATGAGGGGGCAGTGAGATTTCTCAGTGGTTAGTTAGA  500

seq1  GGCCCATCAAACCTGATGTCCTGAGTTGAGCTTGATTCTG  537
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATCAAACCTGATGTCCTGAGTTGAGCTTGATTCTG  540

seq1: chr6_25551422_25552488
seq2: B6Ng01-176L23.g_65_1131

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGATTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGATTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTTTTTATATATGTTGGAATGGCTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTTTTTATATATGTTGGAATGGCTTGTG  100

seq1  CTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTC  150

seq1  TGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAATATATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAATATATTG  200

seq1  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGAGTAATATCCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGAGTAATATCCAACA  250

seq1  TATATAAAGGACTGGTAAATTTTTACAACGACCTTTTGGCCTGCAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAGGACTGGTAAATTTTTACAACGACCTTTTGGCCTGCAAGCTG  300

seq1  GGACTACAACCATCCCCTTAGTTTTCCTAAGCCCAAGTCAATGCATCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTACAACCATCCCCTTAGTTTTCCTAAGCCCAAGTCAATGCATCTGC  350

seq1  CTTCCAATTAACACTTCATTGGACTATACACCTGAGAATTACCCCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATTAACACTTCATTGGACTATACACCTGAGAATTACCCCACAAA  400

seq1  ACTCTATTTTGATACAATTATCCCTCTACTGAATAGGGTGGTATGGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATTTTGATACAATTATCCCTCTACTGAATAGGGTGGTATGGCTGT  450

seq1  AATTAGGATGGAGACACAAAGAAAGGCTTTTAAACCTTTACTAGAACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGATGGAGACACAAAGAAAGGCTTTTAAACCTTTACTAGAACACT  500

seq1  ATTAAAGGATGGAGTGGGTTCACAATAAAGGATAAAGGCAGCTTTTAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGATGGAGTGGGTTCACAATAAAGGATAAAGGCAGCTTTTAAGC  550

seq1  CTTGGGATGTTTGGGTACACAATAATAATTATATTACATATGTCAATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGATGTTTGGGTACACAATAATAATTATATTACATATGTCAATGCA  600

seq1  CAGCACAAACAATCCCTTGTGCATTTTGGTCATATCAGCATAAGGAAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAAACAATCCCTTGTGCATTTTGGTCATATCAGCATAAGGAAACG  650

seq1  TGAATGTTTTATTGAAATTATTATTGCACATATGTTAAAATATAACTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTTTATTGAAATTATTATTGCACATATGTTAAAATATAACTTTA  700

seq1  TGAAAACATATATATAGCTCTCCTTGTGAATTTTGAACATAACTGAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACATATATATAGCTCTCCTTGTGAATTTTGAACATAACTGAGAAC  750

seq1  TACTACCATAATTTATAGATTTTTCAATAAATCTATCAATTTTTACATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACCATAATTTATAGATTTTTCAATAAATCTATCAATTTTTACATAT  800

seq1  AATTTTTAATGTGAATAAATGAATTATTTCCCCCTATAAGTCTTTAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAATGTGAATAAATGAATTATTTCCCCCTATAAGTCTTTAAATT  850

seq1  CTATCCATAAAAATCATAGTACCATACATATATGGTGATTTTTAAA-TTG  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTATCCATAAAAATCATAGTACCATACATATATGGTGATTTTTAAATTTG  900

seq1  TTTTTAGGCTTTTTTTTATATAAATCTTTCCTGGAATGATG-TTTTTCAG  948
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTTTAGGCTTTTTTTTATATAAATCTTTCCTGGAATGATGTTTTTTCAG  950

seq1  GTTTTATCATTTAAATCTTAGACTAGCCTGGCGTGGTGGTGCACGCTTTT  998
      | |||||||||||||||||||||||||||||||||  | |||||||||||
seq2  G-TTTATCATTTAAATCTTAGACTAGCCTGGCGTGTGGTTGCACGCTTTT  999

seq1  AATCCCAGCACTTGGGAGGCAGAGGCAG-ACAGATTTCTGAGTTCGAGGC  1047
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  -ATCCCAGCACTTGGGAGGCAGAGGCAGAACAGATTTCTGAGTTCGAGGC  1048

seq1  CAGCCTGGTCTACAGAATGA  1067
      ||| |||   ||||||||||
seq2  CAG-CTGTCTTACAGAATGA  1067