BAC Information

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BAC

Clone NameB6Ng01-179L20
Chromosome6 (Build37)
Map Location 132,572,848 - 132,678,053
singlet/doubletdoublet
Overlap geneA630073D07Rik, Tas2r120, Tas2r121, Tas2r122
Upstream geneTas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2
Downstream geneTas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884, EG626372, LOC100043649
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179L20.bB6Ng01-179L20.g
ACCGA006377GA006378
length978949
definitionB6Ng01-179L20.b B6Ng01-179L20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,572,848 - 132,573,780)(132,677,416 - 132,678,053)
sequence
gaattctagaatttaaaaacaagcaaacaaacagaaacctaacttataga
gatctccctatccctcctggggataaaagcatgagttattagtactttgc
tcaaatatttatcatagctccaaatgtttccaactcttagagattaagaa
aactctagttagaactgtagtaaacctttgaatttactgaaataatttta
aatgtcttaactgtgtttttaataccaccaccccaaaaatgtcctttttt
atttaagaaggaaatgtaaatactgatgtgaaagatatgtatattttaaa
ctcatggtaatatacagtataacattctaacatgtaattaagacacatgg
tttaagaaaactcatttatcatttcattccagtaaggcaagtatgccttt
gttatcattcaaaatattattattgtgtgtttttaattttgtatctgtga
tcaaataaaaggcacttgttagtctttataggggaaattttgtctgaaag
atgaagttgtctgatgaattattgactctccttattcaggagatctcttc
tgtctcaatctaatctttttcaattttgttggtatccacagattttcttc
tcctttaaaaacaaagacagagacaaagtttggagctaagacaaaaggat
ggactatccagagactaccccacctggagatccatcccaaaatcagccac
caaacccagatactattgcatatgtcagaaagattttgctgaagggaccc
tgttatagctgtcctgtacgaggctatgccagtgcctggcaaatacagaa
gtggatgctcacagtcatctataagatggaacacagggcccccaatgggg
aaaggtagagagagcacccaagttgctgaaggggtctgcaaccctatagt
gaaacaacaattatgaactaagcagtacctccagagctcatatctctagc
tgcacatgtagcagaaggatgggcctaa
gaattcatgggtagatgggaagtaaccgtaaggaggcagaatagaagaaa
acttgttgagaatatattatatgaaaaaattatttttaattaaaacagaa
gtcagttgaaagattggattccatttttgatatgtgctttaaaatttggc
ttttttgtcgttttggatttttggttgtgtttttactgaattgcttttta
ttttattttagaaattacaagataacatttattattttttttcaatgtaa
tctgatatcagtttctttccttcttctcttttgagttcctctccatctca
cctttcatctggatacagagactttctgtatcttgataaatctacacagg
aatctaaaaaataataataaaataaattataatacaataaattaaaaaaa
caaataggaataggacaaaaaaagaaaacaaaagaaaaatgacagaagaa
aaattacaaaaaccacatatacatgcagagacagacatgtttgcacatat
aggaaaacagaaaactggaagccataatatatacaaaaaaaacctgtaca
ctttgtaaaatatgtcattacaaatatgtcatttgtaaaatatgtcattt
ataagaaaataaagcaaagttttaggttcattttttgttgagtatttact
gctggtgcaggggctatttttaagattgtttaagttccctactgagacaa
cattggttaaaaaaaaaaaagtttcatttttgcaagtggttgtccattaa
agatggcgtctattagagacagaggcatgtttatttacatttccttttca
gctcaagaagcccattctggctcagacctctcacagggctctgtgcatgt
ttgccacagtttctgtgaggttatacatgccatctgtcctgtttgtgtct
agaaaagactagtttttgtagtgcccttccatctactctcttgattctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132572848_132573780
seq2: B6Ng01-179L20.b_48_981

seq1  GAATTCTAGAATTTAAAAACAAGCAAACAAACAGAAACCTAACTTATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAATTTAAAAACAAGCAAACAAACAGAAACCTAACTTATAGA  50

seq1  GATCTCCCTATCCCTCCTGGGGATAAAAGCATGAGTTATTAGTACTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCCTATCCCTCCTGGGGATAAAAGCATGAGTTATTAGTACTTTGC  100

seq1  TCAAATATTTATCATAGCTCCAAATGTTTCCAACTCTTAGAGATTAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATTTATCATAGCTCCAAATGTTTCCAACTCTTAGAGATTAAGAA  150

seq1  AACTCTAGTTAGAACTGTAGTAAACCTTTGAATTTACTGAAATAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAGTTAGAACTGTAGTAAACCTTTGAATTTACTGAAATAATTTTA  200

seq1  AATGTCTTAACTGTGTTTTTAATACCACCACCCCAAAAATGTCCTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTAACTGTGTTTTTAATACCACCACCCCAAAAATGTCCTTTTTT  250

seq1  ATTTAAGAAGGAAATGTAAATACTGATGTGAAAGATATGTATATTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAAGGAAATGTAAATACTGATGTGAAAGATATGTATATTTTAAA  300

seq1  CTCATGGTAATATACAGTATAACATTCTAACATGTAATTAAGACACATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGTAATATACAGTATAACATTCTAACATGTAATTAAGACACATGG  350

seq1  TTTAAGAAAACTCATTTATCATTTCATTCCAGTAAGGCAAGTATGCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAAACTCATTTATCATTTCATTCCAGTAAGGCAAGTATGCCTTT  400

seq1  GTTATCATTCAAAATATTATTATTGTGTGTTTTTAATTTTGTATCTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCATTCAAAATATTATTATTGTGTGTTTTTAATTTTGTATCTGTGA  450

seq1  TCAAATAAAAGGCACTTGTTAGTCTTTATAGGGGAAATTTTGTCTGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAAAAGGCACTTGTTAGTCTTTATAGGGGAAATTTTGTCTGAAAG  500

seq1  ATGAAGTTGTCTGATGAATTATTGACTCTCCTTATTCAGGAGATCTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTGTCTGATGAATTATTGACTCTCCTTATTCAGGAGATCTCTTC  550

seq1  TGTCTCAATCTAATCTTTTTCAATTTTGTTGGTATCCACAGATTTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAATCTAATCTTTTTCAATTTTGTTGGTATCCACAGATTTTCTTC  600

seq1  TCCTTTAAAAACAAAGACAGAGACAAAGTTTGGAGCTAAGACAAAAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAAAACAAAGACAGAGACAAAGTTTGGAGCTAAGACAAAAGGAT  650

seq1  GGACTATCCAGAGACTACCCCACCTGGAGATCCATCCCAAAATCAGCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTATCCAGAGACTACCCCACCTGGAGATCCATCCCAAAATCAGCCAC  700

seq1  CAAACCCAGATACTATTGCATATGTCAGAAAGATTTTGCTGAAGGGACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCAGATACTATTGCATATGTCAGAAAGATTTTGCTGAAGGGACCC  750

seq1  TGTTATAGCTGTCCTGTACGAGGCTATGCCAGTGCCTGGCAAATACAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGCTGTCCTGTACGAGGCTATGCCAGTGCCTGGCAAATACAGAA  800

seq1  GTGGATGCTCACAGTCATCTATAAGATGGAACACAGGGCCCCCAATGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGCTCACAGTCATCTATAAGATGGAACACAGGGCCCCCAATGGGG  850

seq1  -AAGGTAGAGAGAGCACCCAAGTTGCTGAAGGGGTCTGCAACCCTATAGG  899
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAGGTAGAGAGAGCACCCAAGTTGCTGAAGGGGTCTGCAACCCTATA-G  899

seq1  TGAAACAACAA-TATGAACTAAGCAGTACCTCCAG  933
      ||||||||||| |||||||||||||||||||||||
seq2  TGAAACAACAATTATGAACTAAGCAGTACCTCCAG  934

seq1: chr6_132677416_132678053
seq2: B6Ng01-179L20.g_68_705 (reverse)

seq1  ACAAAAAATGAACCTAAAACTTTGCTTTATTTTCTTATAAATGACATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAATGAACCTAAAACTTTGCTTTATTTTCTTATAAATGACATATT  50

seq1  TTACAAATGACATATTTGTAATGACATATTTTACAAAGTGTACAGGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATGACATATTTGTAATGACATATTTTACAAAGTGTACAGGTTTT  100

seq1  TTTTGTATATATTATGGCTTCCAGTTTTCTGTTTTCCTATATGTGCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATATATTATGGCTTCCAGTTTTCTGTTTTCCTATATGTGCAAAC  150

seq1  ATGTCTGTCTCTGCATGTATATGTGGTTTTTGTAATTTTTCTTCTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTCTCTGCATGTATATGTGGTTTTTGTAATTTTTCTTCTGTCAT  200

seq1  TTTTCTTTTGTTTTCTTTTTTTGTCCTATTCCTATTTGTTTTTTTAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTGTTTTCTTTTTTTGTCCTATTCCTATTTGTTTTTTTAATTT  250

seq1  ATTGTATTATAATTTATTTTATTATTATTTTTTAGATTCCTGTGTAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTATAATTTATTTTATTATTATTTTTTAGATTCCTGTGTAGATT  300

seq1  TATCAAGATACAGAAAGTCTCTGTATCCAGATGAAAGGTGAGATGGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGATACAGAAAGTCTCTGTATCCAGATGAAAGGTGAGATGGAGAG  350

seq1  GAACTCAAAAGAGAAGAAGGAAAGAAACTGATATCAGATTACATTGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAAAAGAGAAGAAGGAAAGAAACTGATATCAGATTACATTGAAAA  400

seq1  AAAATAATAAATGTTATCTTGTAATTTCTAAAATAAAATAAAAAGCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAAATGTTATCTTGTAATTTCTAAAATAAAATAAAAAGCAATT  450

seq1  CAGTAAAAACACAACCAAAAATCCAAAACGACAAAAAAGCCAAATTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAAACACAACCAAAAATCCAAAACGACAAAAAAGCCAAATTTTAA  500

seq1  AGCACATATCAAAAATGGAATCCAATCTTTCAACTGACTTCTGTTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATATCAAAAATGGAATCCAATCTTTCAACTGACTTCTGTTTTAAT  550

seq1  TAAAAATAATTTTTTCATATAATATATTCTCAACAAGTTTTCTTCTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAATTTTTTCATATAATATATTCTCAACAAGTTTTCTTCTATTC  600

seq1  TGCCTCCTTACGGTTACTTCCCATCTACCCATGAATTC  638
      ||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTTACGGTTACTTCCCATCTACCCATGAATTC  638