BAC Information

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BAC

Clone NameB6Ng01-179M23
Chromosome6 (Build37)
Map Location 75,726,071 - 75,727,177
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155, LOC100042956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179M23.bB6Ng01-179M23.g
ACCGA006428GA006429
length1,135696
definitionB6Ng01-179M23.b B6Ng01-179M23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccacaatcatcatgaagggatttcagtgactgaatttcagctc
tattttataggttttttttcttatattatttgaaatgattgtagtccatt
taccacatgtttacttttgtgattatcaataatgatatactcattgtaca
ttcttcctcatgctaactttaaaggtctgagtgaagaagaagaatgcttc
tagtattacattggacattttctgaggtttaagccacacagtttgcttct
ttgcactcaaatatgtcagaaaataatgcaatagatgagatgcaattaac
atgacagtgtcacaaagaagaggcagaaattgtattttacttaataaagg
ttgcacaactaaattaggatgggcaaatatatgttgaggttattaaatga
accagaaagtccaagagtctaagtctaaagctatgtggcaatgtcactga
gtcattaaaaatactagctaaatctatacttcttccttatagcttacact
actgtgacaaaagttttgcatcctcttgaaaagatacaaaaaatgatggg
aagagttaatgttttatcaatgttgagtaggaagaatgcacatcatgtct
gtcctaaatattaacagaatctaaataaaactcaaaatgagaaagaagag
aaagtctgtacctggtgagctctatgattgtggaatagttattattctag
gttaccaggcatgactaaattcataagactaataatggagtttgagattc
acattcaaaatcaagtctttggattcttcaatcatttatgtatctgtcaa
ctggggatggtgaggccatgttcaagtcaccaattctttaaatctcagat
tctctgggagatactaatctattgttttgtgactcttgctagatcattgt
gagttttgcaggaagcaatgtacaatagaataacttggcctggaaaaggc
acactcgtcttcactattttaattcagttagggatgctacttaccttgga
tttttcactagtaaatggtcaaattatggacacctggattcctgggataa
aagctccttttggttttctgaattatcaacctgcataatggaaggtaggg
tttggctcttaccaattggaaatataaactcatct
gaattctttgtttagctctgtacctcattttttaatgggggttattagaa
tttctggagttcagctttttgagctctttatatatattagatgttattcc
cctatcagatttaggattggtaaaaattctttcccaatctgttggtggcc
tttttgtcttactgacatatcttttgctgtatagaagctttgcaatttta
tgaggtcccatttgtcaattcttgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcctctgtgcccatatctttgagggttttccccac
tttctcctctataaatttcactgtctctggttttatgtggagttatgtgg
tttatgttagacttgagctttggtaataaaatatccatggaaggagttgc
agagacaattttgggcctaagaggaaaggatggaccatccagacactacc
ccacctgggagtccatcccataatcagccaccaaacgcagacactattgc
atacaccagcaagattttgctgaagggaccctgacatagctgtctcctgt
gaggctttgccagtgcctggcaaatacagaagtggatgctcacagtcatc
tataggatgaaacacagggcccccaatggatgagctagagaaagtaccca
aagcaactgaaggggtctgcaaccctataggtggaaaccacaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75726071_75727177
seq2: B6Ng01-179M23.b_41_1175

seq1  GAATTCACCACAATCATCATGAAGGGATTTCAGTGACTGAATTTCAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCACAATCATCATGAAGGGATTTCAGTGACTGAATTTCAGCTC  50

seq1  TATTTTATAGGTTTTTTTTCTTATATTATTTGAAATGATTGTAGTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATAGGTTTTTTTTCTTATATTATTTGAAATGATTGTAGTCCATT  100

seq1  TACCACATGTTTACTTTTGTGATTATCAATAATGATATACTCATTGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATGTTTACTTTTGTGATTATCAATAATGATATACTCATTGTACA  150

seq1  TTCTTCCTCATGCTAACTTTAAAGGTCTGAGTGAAGAAGAAGAATGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCATGCTAACTTTAAAGGTCTGAGTGAAGAAGAAGAATGCTTC  200

seq1  TAGTATTACATTGGACATTTTCTGAGGTTTAAGCCACACAGTTTGCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTACATTGGACATTTTCTGAGGTTTAAGCCACACAGTTTGCTTCT  250

seq1  TTGCACTCAAATATGTCAGAAAATAATGCAATAGATGAGATGCAATTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTCAAATATGTCAGAAAATAATGCAATAGATGAGATGCAATTAAC  300

seq1  ATGACAGTGTCACAAAGAAGAGGCAGAAATTGTATTTTACTTAATAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGTGTCACAAAGAAGAGGCAGAAATTGTATTTTACTTAATAAAGG  350

seq1  TTGCACAACTAAATTAGGATGGGCAAATATATGTTGAGGTTATTAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAACTAAATTAGGATGGGCAAATATATGTTGAGGTTATTAAATGA  400

seq1  ACCAGAAAGTCCAAGAGTCTAAGTCTAAAGCTATGTGGCAATGTCACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAGTCCAAGAGTCTAAGTCTAAAGCTATGTGGCAATGTCACTGA  450

seq1  GTCATTAAAAATACTAGCTAAATCTATACTTCTTCCTTATAGCTTACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTAAAAATACTAGCTAAATCTATACTTCTTCCTTATAGCTTACACT  500

seq1  ACTGTGACAAAAGTTTTGCATCCTCTTGAAAAGATACAAAAAATGATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGACAAAAGTTTTGCATCCTCTTGAAAAGATACAAAAAATGATGGG  550

seq1  AAGAGTTAATGTTTTATCAATGTTGAGTAGGAAGAATGCACATCATGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTAATGTTTTATCAATGTTGAGTAGGAAGAATGCACATCATGTCT  600

seq1  GTCCTAAATATTAACAGAATCTAAATAAAACTCAAAATGAGAAAGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAATATTAACAGAATCTAAATAAAACTCAAAATGAGAAAGAAGAG  650

seq1  AAAGTCTGTACCTGGTGAGCTCTATGATTGTGGAATAGTTATTATTCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGTACCTGGTGAGCTCTATGATTGTGGAATAGTTATTATTCTAG  700

seq1  GTTACCAGGCATGACTAAATTCATAAGACTAATAATGGAG-TTGAGATTC  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTTACCAGGCATGACTAAATTCATAAGACTAATAATGGAGTTTGAGATTC  750

seq1  ACATTCAAAATCAAGTCTTTGGATTCTTCAATCA-TTATGTATCTGTCAA  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACATTCAAAATCAAGTCTTTGGATTCTTCAATCATTTATGTATCTGTCAA  800

seq1  CT-GGGATGGTGAGGCCATGTTCAAGTCACCAATTC-TTAAATCTCAGAT  846
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGGGGATGGTGAGGCCATGTTCAAGTCACCAATTCTTTAAATCTCAGAT  850

seq1  TCTCTGGGAGATACTAATCTATTGTTTTGTGACTCTTGCTAGATCATTGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGAGATACTAATCTATTGTTTTGTGACTCTTGCTAGATCATTGT  900

seq1  GAGTTTTGCAGGAAGCAATGTACAATAGAATAACTT-GCCTGGAGAAGGC  945
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  GAGTTTTGCAGGAAGCAATGTACAATAGAATAACTTGGCCTGGAAAAGGC  950

seq1  ACACTCGTCTTCACTATTTT-ATTCAG-TAAGGATGCTACTTA-CTTTGA  992
      |||||||||||||||||||| |||||| || |||||||||||| ||| ||
seq2  ACACTCGTCTTCACTATTTTAATTCAGTTAGGGATGCTACTTACCTTGGA  1000

seq1  TTTTTCACTAGTAA--TGTC-AATTATGGACAC--TGATTCTTGGGA-AA  1036
      ||||||||||||||   ||| ||||||||||||   ||||| ||||| ||
seq2  TTTTTCACTAGTAAATGGTCAAATTATGGACACCTGGATTCCTGGGATAA  1050

seq1  AAGCT-CTTTTG--TTTCTG-ATTATCA--CTGCAT-ATG--ATGTAGG-  1076
      ||||| ||||||  |||||| |||||||  |||||| |||  | ||||| 
seq2  AAGCTCCTTTTGGTTTTCTGAATTATCAACCTGCATAATGGAAGGTAGGG  1100

seq1  --TTGCTCTTACCAATT-GAAATATAAA-TCATCT  1107
        | ||||||||||||| |||||||||| ||||||
seq2  TTTGGCTCTTACCAATTGGAAATATAAACTCATCT  1135